# STOCKHOLM 1.0 #=GF ID 3.30.70.660/FF/000012 #=GF DE tRNA pseudouridine synthase #=GF AC 3.30.70.660/FF/000012 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 85.646 #=GS P31115/218-403 AC P31115 #=GS P31115/218-403 OS Saccharomyces cerevisiae S288C #=GS P31115/218-403 DE tRNA pseudouridine(38/39) synthase #=GS P31115/218-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS P31115/218-403 DR GO; GO:0005634; GO:0005737; GO:0009982; GO:0031119; GO:1990481; #=GS P31115/218-403 DR EC; 5.4.99.45; #=GS Q9UTB3/204-395 AC Q9UTB3 #=GS Q9UTB3/204-395 OS Schizosaccharomyces pombe 972h- #=GS Q9UTB3/204-395 DE Putative tRNA pseudouridine synthase C25B8.05 #=GS Q9UTB3/204-395 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; #=GS Q9UTB3/204-395 DR GO; GO:0005634; GO:0005829; GO:0009982; GO:0031119; #=GS Q54I97/242-418 AC Q54I97 #=GS Q54I97/242-418 OS Dictyostelium discoideum #=GS Q54I97/242-418 DE tRNA pseudouridine synthase #=GS Q54I97/242-418 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; #=GS Q54I97/242-418 DR GO; GO:0005634; GO:0005737; GO:0006396; GO:0009982; #=GS A7SJV8/212-410 AC A7SJV8 #=GS A7SJV8/212-410 OS Nematostella vectensis #=GS A7SJV8/212-410 DE tRNA pseudouridine synthase #=GS A7SJV8/212-410 DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; #=GS B7Q752/134-311 AC B7Q752 #=GS B7Q752/134-311 OS Ixodes scapularis #=GS B7Q752/134-311 DE tRNA pseudouridine synthase #=GS B7Q752/134-311 DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; #=GS F0ZSG7/219-406 AC F0ZSG7 #=GS F0ZSG7/219-406 OS Dictyostelium purpureum #=GS F0ZSG7/219-406 DE tRNA pseudouridine synthase #=GS F0ZSG7/219-406 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; #=GS Q59N30/255-445 AC Q59N30 #=GS Q59N30/255-445 OS Candida albicans SC5314 #=GS Q59N30/255-445 DE tRNA pseudouridine synthase #=GS Q59N30/255-445 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; #=GS A0A1H6PZX7/211-391 AC A0A1H6PZX7 #=GS A0A1H6PZX7/211-391 OS Yarrowia lipolytica #=GS A0A1H6PZX7/211-391 DE tRNA pseudouridine synthase #=GS A0A1H6PZX7/211-391 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS Q750F7/208-387 AC Q750F7 #=GS Q750F7/208-387 OS Eremothecium gossypii ATCC 10895 #=GS Q750F7/208-387 DE tRNA pseudouridine synthase #=GS Q750F7/208-387 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; #=GS R9XI12/208-383 AC R9XI12 #=GS R9XI12/208-383 OS Saccharomycetaceae sp. 'Ashbya aceri' #=GS R9XI12/208-383 DE tRNA pseudouridine synthase #=GS R9XI12/208-383 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; #=GS B9WH16/210-402 AC B9WH16 #=GS B9WH16/210-402 OS Candida dubliniensis CD36 #=GS B9WH16/210-402 DE tRNA pseudouridine synthase #=GS B9WH16/210-402 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; #=GS H0GFN5/218-403 AC H0GFN5 #=GS H0GFN5/218-403 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GFN5/218-403 DE tRNA pseudouridine synthase #=GS H0GFN5/218-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS A0A0L8VR78/218-403 AC A0A0L8VR78 #=GS A0A0L8VR78/218-403 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VR78/218-403 DE tRNA pseudouridine synthase #=GS A0A0L8VR78/218-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS N1P4N2/218-403 AC N1P4N2 #=GS N1P4N2/218-403 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1P4N2/218-403 DE tRNA pseudouridine synthase #=GS N1P4N2/218-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LUK8/218-403 AC B3LUK8 #=GS B3LUK8/218-403 OS Saccharomyces cerevisiae RM11-1a #=GS B3LUK8/218-403 DE tRNA pseudouridine synthase #=GS B3LUK8/218-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C7GYA6/218-403 AC C7GYA6 #=GS C7GYA6/218-403 OS Saccharomyces cerevisiae JAY291 #=GS C7GYA6/218-403 DE tRNA pseudouridine synthase #=GS C7GYA6/218-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8Z7T3/218-403 AC C8Z7T3 #=GS C8Z7T3/218-403 OS Saccharomyces cerevisiae EC1118 #=GS C8Z7T3/218-403 DE tRNA pseudouridine synthase #=GS C8Z7T3/218-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A7A238/218-403 AC A7A238 #=GS A7A238/218-403 OS Saccharomyces cerevisiae YJM789 #=GS A7A238/218-403 DE tRNA pseudouridine synthase #=GS A7A238/218-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS G2WDD9/218-403 AC G2WDD9 #=GS G2WDD9/218-403 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WDD9/218-403 DE tRNA pseudouridine synthase #=GS G2WDD9/218-403 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS Q6C194/211-391 AC Q6C194 #=GS Q6C194/211-391 OS Yarrowia lipolytica CLIB122 #=GS Q6C194/211-391 DE tRNA pseudouridine synthase #=GS Q6C194/211-391 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GF SQ 20 P31115/218-403 --VHRHYKYIFNG----KNLNIEKMSKAASYFVGERDFRNFCKLDGSKQITNFKRTIISSKILPL----------------SETFYCFDLVGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPLLLYDCKFPE-MDWQEPTVDDYKAIKFTT----ATEALTLHYELKAAVCNIFKDVLPTANTN--NFSKTIINL------ Q9UTB3/204-395 --KQRHYKYLFTKDYPGGSLDIDRMNEAAALYLGEHDFRNFCKIDASKQITNYHRRILSSKVICID--------------PSTGLYAFDLQGTAFLWHQVRCMMAILFLIGQKLEPASLINDLLDIKKVPTKPIYDMASEYPLILYDCDFDN-IEWTLPTDSPTTAPRIAKHTYETIYHQWHSLRIREQIASFMLD-IADHNVK--RYGKSE--------- Q54I97/242-418 --LSRTYKYFFNP----NGLDLNLMKEASKLYLGEHNYINFCKIDV--NVKSFMRVILQFDIEKVE---------------NSELYVATIKGFAFLWHQIRCMMAVLFLIGQKKANISLITQLLDTNKTITKPPYEMASEVPLVLFDCGYDD-IDFIYESSVQE---KTVE----SMFGVYNDYLIKTEVNRLIRSTLKN-----TEPTTTSK-------- A7SJV8/212-410 --SYRKYKYLFPS----ANLDIDLMNLASKKLEGEHDFRNFCKMDVANGVIQFTRNITSFKVQKVSNATYSAPGENKAKQRGYEMCEAVICGSAFLWHQVRCMMSILLMVGQGLEQPEVIDWLLDIEKCPQRPQYNMASELPLVLYDCVYEG-ITWIYDPQVLE---SVTK----NLQQLWNTYATKATLAQELLASLDSAEIP-GNPLTNWSS------- B7Q752/134-311 --QARTYRYFLPK----GNLVVQRMREAAKLLVGEHDFRNLCKMDVGNGVTRYVRRILSTELYDGE-------PEGDGGSSGYQMLCLEIVGQAFLWHQVRCIVAILLLVGQGLEEPEVVSKLLDVEAHPCKPQYGMASEIPLVLYDCQFEG-LDWRYDVAELT---AVSK----HLQKLWMHERVKSEMIRSMLKDIA---------------------- F0ZSG7/219-406 ---FRTYKYFFTL----NNMDLNLMKEAGNHYLGEHDFSNFCKMDI-ENVKSFKRVILEFSIEPVN--------------NHNDLYVATIKGYAFLWHQIRCMMAMLFLIGQKKFPVSIIPELLDTSNGITKPPYEMASEIPLVLFDCGYED-LEFIIDNDAQE---RTLS----VMNNLYNQFLIKSQVINLMKSNLTFINKP-IEDNTNSNNN-NNKF- Q59N30/255-445 --LSRHYRYIFRK----QDLDIELMNQGAKLYQGIHDFRNFCKLDGSKQITNFVREIYQSQIIHL----------------HQDYYCFDLKGSAFLWHQVRCMVAILFTIGQSLESPSIITDLMDTNKFPTKPQYEMAHDIPLVLYDCEFPS-MEWKSTD-DEYRLHRVIQ----GFTRMQYDLQLKTQMSQIMEDTL-FKNQDPTTTTTKILKTMNNGD- A0A1H6PZX7/211-391 --EYRHYRYFFHK----GDLDIDLMRQAAKLYLGEHDYRNFCKVDGSKQLAHHNRVMLEAEIEQL----------------SDDIYYFNLKGRAFLWHQVRCMMAILFLVGQKLEKPSVITDLLNPEKYPGRPVYDMAHDVPLVLYDCTFKEPIEWITPNAMPQE--RMEN----SNFKHWHDVMLQSTLSLAMMKHIAERTGS--ERTFP---------- Q750F7/208-387 --KYRHYKYLFNK----SGLDLSKMEEAARLYEGEHDFRNFCKLDGSKQITNFKRTILSAKILHV----------------DGDMYCFDLLGSAFLWHQVRCMMANLFIVGQGLEPLTLINNLLDVEKNPQKPVYDMASDIPLILYDCKFDD-MEWQLPDLSAEKAFKTTR----SVDGIYLDYQLKAAVSTIFKNTLPRADKN--EKI------------ R9XI12/208-383 --KYRHYKYLFDK----SGLDLAKMEAAAKLYEGEHDFRNFCKLDGSKQITNFKRTILSAKILHV----------------DGDMYCFDLLGSAFLWHQVRCMMANLFIVGQGLEPLTLINELLDVEKNPRKPVYDMASDIPLILYDCKFDD-MEWQLPDLSAEKAFKTTR----SVDAVYLDYQLKAAVSTIFKDTLPRASE------------------ B9WH16/210-402 SCLSCHYRYIFRK----QDLNIDLMNQGANLYQGIHDFRNFCKLDGSKQITNFVREIYQAQILHL----------------HQDYYCFDLKGSAFLWHQVRCMVAILFSIGQELESPSIITDLMDMTKYPTKPQYEMAHDIPLVLYDCEFPP-MEWKSTN-DEYRLHRVIQ----SFTRMQYDLQLKTQMSQIMENTLLFKNQD--SATTKILKTMNNGDG H0GFN5/218-403 --VHRHYKYIFNG----KNLNIEKMSKAASYFVGERDFRNFCKLDGSKQITNFKRTIISSKILPL----------------SETFYCFDLIGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPLLLYDCKFPE-MDWQEPTVDDYKAIKFTT----ATEALTLHYELKAAVCNIFKDVLPTANTN--NFSKTIINL------ A0A0L8VR78/218-403 --VHRHYKYIFNG----KNLNIEKMSKAASYFVGERDFRNFCKLDGSKQITNFKRTIISSKILPL----------------SETFYCFDLIGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPLLLYDCKFPE-MDWQEPTVDDYKAIKFTT----ATEALTLHYELKAAVCNIFKDVLPTANTN--NFSKTIINL------ N1P4N2/218-403 --VHRHYKYIFNG----KNLNIEKMSKAASYFVGERDFRNFCKLDGSKQITNFKRTIISSKILPL----------------SETFYCFDLIGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPLLLYDCKFPE-MDWQEPSVDDYKAIKFTT----ATEALTLHYELKAAVCNIFKDVLPTANTN--NFSKTIINL------ B3LUK8/218-403 --VHRHYKYIFNG----KNLNIEKMSKAASYFVGERDFRNFCKLDGSKQITNFKRTIISSKILPL----------------SETFYCFDLIGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPLLLYDCKFPE-MDWQEPTVDDYKAIKFTT----ATEALTLHYELKAAVCNIFKDVLPTANTN--NFSKTIINL------ C7GYA6/218-403 --VHRHYKYIFNG----KNLNIEKMSKAASYFVGERDFRNFCKLDGSKQITNFKRTIISSKILPL----------------SETFYCFDLIGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPLLLYDCKFPE-MDWQEPTVDDYKAIKFTT----ATEALTLHYELKAAVCNIFKDVLPTANTN--NFSKTIINL------ C8Z7T3/218-403 --VHRHYKYIFNG----KNLNIEKMSKAASYFVGERDFRNFCKLDGSKQITNFKRTIISSKILPL----------------SETFYCFDLIGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPLLLYDCKFPE-MDWQEPTVDDYKAIKFTT----ATEALTLHYELKAAVCNIFKDVLPTANTN--NFSKTIINL------ A7A238/218-403 --VHRHYKYIFNG----KNLNIEKMSKAASYFVGERDFRNFCKLDGSKQITNFKRTIISSKILPL----------------SETFYCFDLIGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPLLLYDCKFPE-MDWQEPTVDDYKAIKFTT----ATEALTLHYELKAAVCNIFKDVLPTANTN--NFSKTIINL------ G2WDD9/218-403 --VHRHYKYIFNG----KNLNIEKMSKAASYFVGERDFRNFCKLDGSKQITNFKRTIISSKILPL----------------SETFYCFDLIGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPLLLYDCKFPE-MDWQEPTVDDYKAIKFTT----ATEALTLHYELKAAVCNIFKDVLPTANTN--NFSKTIINL------ Q6C194/211-391 --EYRHYRYFFHK----GDLDIDLMRQAAKLYLGEHDYRNFCKVDGSKQLAHHNRVMLEAEIEQL----------------SDDIYYFNLKGRAFLWHQVRCMMAILFLVGQKLEKPSVITDLLNPEKYPGRPVYDMAHDVPLVLYDCTFKEPIEWITPNAMPQE--RMEN----SNFKHWHDVMLQSTLSLAMMKHIAERTGS--ERTFP---------- #=GC scorecons 00248697958440000458565494476446497688798996955566557494855457345000000000000000043447455639499999989987869767994763556734957557374794969957699698994745066742542333221544300004334433443675464345443732342200323232111000000 #=GC scorecons_70 ____*_***_*________*_*__*__**__*_**********_*____*__*_*_*____*_______________________*___*_*_***************_***_**____*__*_*__*_*_**_****_****_****_*___***______________________________*__________*_______________________ #=GC scorecons_80 ____*_***_*________*____*__*_____**_**_****_*_________*_*____*_______________________*_____*_************_**_***__________*_*__*____*_*_**_*_**_****_*_____*______________________________*__________________________________ #=GC scorecons_90 ____*_*_*_*________*____*________*__*__****_*_________*____________________________________*_******_***_*_*___**__________*_________*_*_**___**_****_________________________________________________________________________ //