# STOCKHOLM 1.0 #=GF ID 3.30.70.590/FF/000005 #=GF DE Nuclear poly(A) polymerase 3 #=GF AC 3.30.70.590/FF/000005 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 82.540 #=GS Q56XM9/336-447 AC Q56XM9 #=GS Q56XM9/336-447 OS Arabidopsis thaliana #=GS Q56XM9/336-447 DE Nuclear poly(A) polymerase 3 #=GS Q56XM9/336-447 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q56XM9/336-447 DR GO; GO:0005515; GO:0005737; #=GS Q56XM9/336-447 DR EC; 2.7.7.19; #=GS B7F8L5/397-506 AC B7F8L5 #=GS B7F8L5/397-506 OS Oryza sativa Japonica Group #=GS B7F8L5/397-506 DE Os03g0313300 protein #=GS B7F8L5/397-506 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS D7SYI5/396-500 AC D7SYI5 #=GS D7SYI5/396-500 OS Vitis vinifera #=GS D7SYI5/396-500 DE Uncharacterized protein #=GS D7SYI5/396-500 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; #=GS B9HIL2/329-433 AC B9HIL2 #=GS B9HIL2/329-433 OS Populus trichocarpa #=GS B9HIL2/329-433 DE Uncharacterized protein #=GS B9HIL2/329-433 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A1B6QGD3/403-512 AC A0A1B6QGD3 #=GS A0A1B6QGD3/403-512 OS Sorghum bicolor #=GS A0A1B6QGD3/403-512 DE Uncharacterized protein #=GS A0A1B6QGD3/403-512 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS I1H649/391-499 AC I1H649 #=GS I1H649/391-499 OS Brachypodium distachyon #=GS I1H649/391-499 DE Uncharacterized protein #=GS I1H649/391-499 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS D7L5J5/338-445 AC D7L5J5 #=GS D7L5J5/338-445 OS Arabidopsis lyrata subsp. lyrata #=GS D7L5J5/338-445 DE Polynucleotide adenylyltransferase #=GS D7L5J5/338-445 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A2T7CDG6/389-497 AC A0A2T7CDG6 #=GS A0A2T7CDG6/389-497 OS Panicum hallii var. hallii #=GS A0A2T7CDG6/389-497 DE Uncharacterized protein #=GS A0A2T7CDG6/389-497 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; Panicum hallii var. hallii; #=GS A0A1D6INW1/397-506 AC A0A1D6INW1 #=GS A0A1D6INW1/397-506 OS Zea mays #=GS A0A1D6INW1/397-506 DE Nuclear poly(A) polymerase 3 #=GS A0A1D6INW1/397-506 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS K4A886/389-497 AC K4A886 #=GS K4A886/389-497 OS Setaria italica #=GS K4A886/389-497 DE Uncharacterized protein #=GS K4A886/389-497 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Cenchrinae; Setaria; Setaria italica; #=GS A0A0E0GLJ1/274-383 AC A0A0E0GLJ1 #=GS A0A0E0GLJ1/274-383 OS Oryza sativa f. spontanea #=GS A0A0E0GLJ1/274-383 DE Uncharacterized protein #=GS A0A0E0GLJ1/274-383 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; #=GS A0A2S3IR88/389-497 AC A0A2S3IR88 #=GS A0A2S3IR88/389-497 OS Panicum hallii #=GS A0A2S3IR88/389-497 DE Uncharacterized protein #=GS A0A2S3IR88/389-497 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum sect. Panicum; Panicum hallii; #=GS A0A1W0W7X4/304-413 AC A0A1W0W7X4 #=GS A0A1W0W7X4/304-413 OS Sorghum bicolor #=GS A0A1W0W7X4/304-413 DE Uncharacterized protein #=GS A0A1W0W7X4/304-413 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS A0A1W0W7X5/283-392 AC A0A1W0W7X5 #=GS A0A1W0W7X5/283-392 OS Sorghum bicolor #=GS A0A1W0W7X5/283-392 DE Uncharacterized protein #=GS A0A1W0W7X5/283-392 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; #=GS B8A1W2/344-452 AC B8A1W2 #=GS B8A1W2/344-452 OS Zea mays #=GS B8A1W2/344-452 DE Uncharacterized protein #=GS B8A1W2/344-452 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A317YKE6/389-497 AC A0A317YKE6 #=GS A0A317YKE6/389-497 OS Zea mays #=GS A0A317YKE6/389-497 DE Nuclear poly(A) polymerase 3 #=GS A0A317YKE6/389-497 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS B6UBW8/389-497 AC B6UBW8 #=GS B6UBW8/389-497 OS Zea mays #=GS B6UBW8/389-497 DE Nuclear poly(A) polymerase 3 #=GS B6UBW8/389-497 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1D6K0U3/394-502 AC A0A1D6K0U3 #=GS A0A1D6K0U3/394-502 OS Zea mays #=GS A0A1D6K0U3/394-502 DE Nuclear poly(A) polymerase 3 #=GS A0A1D6K0U3/394-502 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS K7VMF5/389-497 AC K7VMF5 #=GS K7VMF5/389-497 OS Zea mays #=GS K7VMF5/389-497 DE Nuclear poly(A) polymerase 3 #=GS K7VMF5/389-497 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A3N7GT54/336-440 AC A0A3N7GT54 #=GS A0A3N7GT54/336-440 OS Populus trichocarpa #=GS A0A3N7GT54/336-440 DE Uncharacterized protein #=GS A0A3N7GT54/336-440 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS A0A1D6E1L2/356-479 AC A0A1D6E1L2 #=GS A0A1D6E1L2/356-479 OS Zea mays #=GS A0A1D6E1L2/356-479 DE Nuclear poly(A) polymerase 2 #=GS A0A1D6E1L2/356-479 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GF SQ 21 Q56XM9/336-447 -YANTYTWFTKI-HLSAANQEDLSDWVGWVKSRFRCLLIKIEE---VYGICDPNPTEY-VETYTKQPNIVFYWGLQLRTIN-----------VSDIESVKIDFLKNVNSGSF---RGTVGRIQLTLVKASQL B7F8L5/397-506 -YTVRYKHFLRI-VLSAPVAEELRDWVGWVKSRFRNLLLKLES---IGVDCDPDPSEQ-ADHSMIEPNVVFFWGLMYRTST-----------NICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIV----- D7SYI5/396-500 -YSKKYSRFIKI-YLSSSNQDELGDWVGWVKSRFRFLLAKVEE---VQGLCDPNPTEF-IDPDAGGPNVVFFWGVQPGRIN-----------FSDIDVVEDDFMQNINNGGY---QGPPGKMNLS------- B9HIL2/329-433 -YSTNYTRFVKI-YLSAPDQDELGDWVGWVKSHFRCLLLKLEA---VQGFCDPNPMEY-VDMDASEPNVVFYWGLNRSRCN-----------FVYIEPVEEDFSRSIYCGYY----GIRGKMELSI------ A0A1B6QGD3/403-512 -YDKKYQQFLRI-ALCAPTFAELRDWAGWVKSRFRLLILKLER---AGIECDPCPSEE-VDHTDNDPNVVFYWGLIPERII-----------QVDTSSLKEDFMESITNDVYGTVKCTHSDVTISVV----- I1H649/391-499 -YTVKYEHFLHM-VLSAPTTEELRDWVGWVKSRFRNLILKLES---LDVDCDPDPSEK-VNHTIAAPNVVFFWGLIY-RST-----------KISASSLKNDFMKSVINNIYGKEKCARSDITMSII----- D7L5J5/338-445 -YENTYTWFTKI-HLSAANQEDLSDWVGWVKSRFRCLLSKIEE---VYGICDPNPTEY-VETYTKQPNIVFYWGLQLRTIN-----------VSDIESVETEFLKNLNSGSF---QGPVGRIQLSVVK---- A0A2T7CDG6/389-497 -YGARYKCFLRI-FLSAPMAEELRDWVGWVKSRFRNLILKLES---LGVYCDPDPSEQ-ADHTINEPNVVFFWGLMYRRNI-----------QICTSSLKEDFMKSVLNNIYGKEKCAHSDITMSI------ A0A1D6INW1/397-506 -YDQKYQQFLRI-ALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEE-VDHTDNDPNVVFYWGLIPKRII-----------QVDTSSLKGDFMEDLTNDVYGTVKCTHSDVTISVV----- K4A886/389-497 -YGARYKCFLRI-VLSAPMAEELRDWVGWVKSRFRNLILKLES---LGVFCDPDPSEQ-VDHTINEPNVVFFWGLMYRRSI-----------QICSSSLKEDFMKSVFNNIYGKEKCAHSDITMSI------ A0A0E0GLJ1/274-383 -YTVRYKHFLRI-VLSAPVAEELRDWVGWVKSRFRNLLLKLES---IGVDCDPDPSEQ-ADHSMIEPNVVFFWGLMYRTST-----------NICIDSVKEDFMKSVTNDIYGKEKCTHSDITMSIV----- A0A2S3IR88/389-497 -YGARYKCFLRI-FLSAPMAEELRDWVGWVKSRFRNLILKLES---LGVYCDPDPLEQ-ADHTINEPNVVFFWGLMYRRNI-----------QICTSSLKEDFMKSVLNNIYGKEKCAHSDITMSI------ A0A1W0W7X4/304-413 -YDKKYQQFLRI-ALCAPTFAELRDWAGWVKSRFRLLILKLER---AGIECDPCPSEE-VDHTDNDPNVVFYWGLIPERII-----------QVDTSSLKEDFMESITNDVYGTVKCTHSDVTISVV----- A0A1W0W7X5/283-392 -YDKKYQQFLRI-ALCAPTFAELRDWAGWVKSRFRLLILKLER---AGIECDPCPSEE-VDHTDNDPNVVFYWGLIPERII-----------QVDTSSLKEDFMESITNDVYGTVKCTHSDVTISVV----- B8A1W2/344-452 --DQKYQQFLRI-ALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIECDPCPSEE-VDHTDNDPNVVFYWGLIPKRII-----------QVDTSSLKGDFMEDLTNDVYGTVKCTHSDVTISVV----- A0A317YKE6/389-497 -YGARYKCFLRI-VLSAPMGEELRDWVGWVKSRFRNLLLKLES---LGVYCDPDPSEQ-VDHTITDPNVVFFWGLIYRRNI-----------QICISSLKEDFMKSVCNNIYGKEKCAHSDITMSI------ B6UBW8/389-497 -YGARYKCFLRI-VLSAPMGEELRDWVGWVKSRFRNLLLKLES---LGVYCDPDPSEQ-VDHTITDPNVVFFWGLIYRRNI-----------QICISSLKEDFMKSVCNNIYGKEKCAHSDITMSI------ A0A1D6K0U3/394-502 -YGARYKCFLRI-VLSAPMGEELRDWVGWVKSRFRNLLLKLES---LGVYCDPDPSEQ-VDHTITDPNVVFFWGLIYRRNI-----------QICISSLKEDFMKSVCNNIYGKEKCAHSDITMSI------ K7VMF5/389-497 -YGARYKCFLRI-VLSAPMEDELRDWVGWVKSRFRNLLLKLES---LGVYCDPDPSKQ-VDHTITDPNVVFFWGLIYRRSI-----------QICTNSLKEDFMKSVCNNIYGKEKCAHSDITMAV------ A0A3N7GT54/336-440 -YSTNYTRFVKI-YLSAPDQDELGDWVGWVKSHFRCLLLKLEA---VQGFCDPNPMEY-VDMDASEPNVVFYWGLNRSRCN-----------FVYIEPVEEDFSRSIYCGYY----GIRGKMELSI------ A0A1D6E1L2/356-479 PFFSTHKSYLQVDAAVAGGAEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRRASSFFVGLSKPQQQHKPHPPEGYPPFFDLRATVLEFQQDVYSYKF---WRPGLELVVKHV----- #=GC scorecons 073348438667037586335895895999897893965969400044439774947406744334777797798334634000000000003445465547955563543731145445565564200000 #=GC scorecons_70 _*___*__*_**__*_*____**_**_********_*__***________***_*_*__**_____*********______________________*___**___*____*____________*_______ #=GC scorecons_80 _*___*__*__*__*_*____**_**_********_*__*_*________***_*_*___*_____**_******__________________________**________*____________________ #=GC scorecons_90 _____*__*_______*____**_**_***_*_**_*__*_*________*___*_______________*__**___________________________*_____________________________ //