# STOCKHOLM 1.0
#=GF ID 3.30.70.580/FF/000032
#=GF DE tRNA pseudouridine synthase
#=GF AC 3.30.70.580/FF/000032
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 78.098
#=GS Q59069/1-98                AC Q59069
#=GS Q59069/1-98                OS Methanocaldococcus jannaschii DSM 2661
#=GS Q59069/1-98                DE tRNA pseudouridine synthase A
#=GS Q59069/1-98                DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus; Methanocaldococcus jannaschii; 
#=GS Q59069/1-98                DR EC; 5.4.99.12; 
#=GS Q8ZXR6/2-85                AC Q8ZXR6
#=GS Q8ZXR6/2-85                OS Pyrobaculum aerophilum str. IM2
#=GS Q8ZXR6/2-85                DE tRNA pseudouridine synthase A
#=GS Q8ZXR6/2-85                DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum aerophilum; 
#=GS Q8ZXR6/2-85                DR EC; 5.4.99.12; 
#=GS A8B4L8/81-168_230-256      AC A8B4L8
#=GS A8B4L8/81-168_230-256      OS Giardia lamblia ATCC 50803
#=GS A8B4L8/81-168_230-256      DE Pseudouridylate synthase, putative
#=GS A8B4L8/81-168_230-256      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS E1F1Z7/71-158_214-240      AC E1F1Z7
#=GS E1F1Z7/71-158_214-240      OS Giardia lamblia P15
#=GS E1F1Z7/71-158_214-240      DE Pseudouridylate synthase, putative
#=GS E1F1Z7/71-158_214-240      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS V6THN3/81-168_230-256      AC V6THN3
#=GS V6THN3/81-168_230-256      OS Giardia intestinalis
#=GS V6THN3/81-168_230-256      DE tRNA pseudouridine synthase
#=GS V6THN3/81-168_230-256      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS A0A132NRX2/60-147_207-232  AC A0A132NRX2
#=GS A0A132NRX2/60-147_207-232  OS Giardia intestinalis assemblage B
#=GS A0A132NRX2/60-147_207-232  DE tRNA pseudouridine synthase
#=GS A0A132NRX2/60-147_207-232  DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS V6TX19/60-147_207-232      AC V6TX19
#=GS V6TX19/60-147_207-232      OS Giardia intestinalis
#=GS V6TX19/60-147_207-232      DE tRNA pseudouridine synthase
#=GS V6TX19/60-147_207-232      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GS C6LSZ5/60-147_207-232      AC C6LSZ5
#=GS C6LSZ5/60-147_207-232      OS Giardia intestinalis ATCC 50581
#=GS C6LSZ5/60-147_207-232      DE Pseudouridylate synthase, putative
#=GS C6LSZ5/60-147_207-232      DR ORG; Eukaryota; Diplomonadida; Hexamitidae; Giardiinae; Giardia; Giardia intestinalis; 
#=GF SQ 8
Q59069/1-98                        MYI-----------LKIAYDGR--YSFQQQPHKQ-TVCDILLDALEETGFL-----AKKKVIYSGGRTDKGVSALGN-FVVVELKKEPILSYINAKLKDKGIWVLGYREIDEIPKVKY
Q8ZXR6/2-85                        PYL-----------YRIAYDGTMFYGFTGHP-----------NSLEPRLRL-----IFGEILGRGSRTDPGVSAVGN-VVMTGRKMA--LGYVNSKM-PKGAWAWGIAEVPEGFN---
A8B4L8/81-168_230-256              SLMDWSTIPLRHIAIQVCYDGTEYAGLAQQPNREYTIEELLLNALRGAALIPQHAEASDVHFERSGRTDRGVSAAGQVFSFYVRTNNKYVSAINMRL-PETIRVLGWAPVDENFSA--
E1F1Z7/71-158_214-240              SLMDWSTIPLRHIAIQVCYDGTEYAGLAQQPNKEYTIEELLLNALRDAALIPQYATASDVHFERSGRTDRGVSAAGQVFSFYARTNNKYVSAINMRL-PETIRVLGWAPVDENFSA--
V6THN3/81-168_230-256              SLMDWSTIPLRHIAIQVCYDGTEYAGLAQQPNREYTIEELLLNALRGAALIPQHAEASDVHFERSGRTDRGVSAAGQVFSFYVRTNNKYVSAINMRL-PETIRVLGWAPVDKNFSA--
A0A132NRX2/60-147_207-232          SLMDWSTIPLRHIAIQVCYDGTEYAGLAQQSNKEYTIEELLLNALRDAALIPQHATANDIHFERSGRTDRGVIAAGQVFSFYARTNNKYVSAINMRL-PETIRVLGWAPVDENFS---
V6TX19/60-147_207-232              SLMDWSTIPLRHIAIQVCYDGTEYAGLAQQSNKEYTIEELLLNALRDAALIPQHATANDIHFERSGRTDRGVIAAGQVFSFYARTNNKYVSAINMRL-PETIRVLGWAPVDENFS---
C6LSZ5/60-147_207-232              SLMDWSTIPLRHIAIQVCYDGTEYAGLAQQSNKEYTIEELLLNALRDAALIPQHATANDIHFERSGRTDRGVIAAGQVFSFYARTNNKYVSAINMRL-PETIRVLGWAPVDENFS---
#=GC scorecons                     4552222222222245659996244664576333243233446695344362212162433536569994996949526543355442266479467055565659364757354000
#=GC scorecons_70                  ________________*_***____*___**___________***____________________****_**_*_*______________*_**_**______*_*___*_*______
#=GC scorecons_80                  __________________***_______________________*_____________________***_**_*_*________________**___________*___*_*______
#=GC scorecons_90                  __________________***_______________________*_____________________***_**_*_*_________________*___________*____________
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