# STOCKHOLM 1.0 #=GF ID 3.30.70.580/FF/000017 #=GF DE Related to DEG1-pseudouridine synthase #=GF AC 3.30.70.580/FF/000017 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 76.307 #=GS Q54I97/75-159_211-241 AC Q54I97 #=GS Q54I97/75-159_211-241 OS Dictyostelium discoideum #=GS Q54I97/75-159_211-241 DE tRNA pseudouridine synthase #=GS Q54I97/75-159_211-241 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; #=GS Q54I97/75-159_211-241 DR GO; GO:0005634; GO:0005737; GO:0006396; GO:0009982; #=GS A0A0D1CL90/78-172_219-249 AC A0A0D1CL90 #=GS A0A0D1CL90/78-172_219-249 OS Ustilago maydis 521 #=GS A0A0D1CL90/78-172_219-249 DE Uncharacterized protein #=GS A0A0D1CL90/78-172_219-249 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; #=GS E3KHT7/94-213_247-277 AC E3KHT7 #=GS E3KHT7/94-213_247-277 OS Puccinia graminis f. sp. tritici CRL 75-36-700-3 #=GS E3KHT7/94-213_247-277 DE Uncharacterized protein #=GS E3KHT7/94-213_247-277 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; #=GS F6R255/94-185_229-257 AC F6R255 #=GS F6R255/94-185_229-257 OS Ciona intestinalis #=GS F6R255/94-185_229-257 DE tRNA pseudouridine(38/39) synthase #=GS F6R255/94-185_229-257 DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; #=GS F0ZSG7/58-143_187-217 AC F0ZSG7 #=GS F0ZSG7/58-143_187-217 OS Dictyostelium purpureum #=GS F0ZSG7/58-143_187-217 DE tRNA pseudouridine synthase #=GS F0ZSG7/58-143_187-217 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; #=GS A0A0D0X7F5/63-156_209-239 AC A0A0D0X7F5 #=GS A0A0D0X7F5/63-156_209-239 OS Cryptococcus gattii EJB2 #=GS A0A0D0X7F5/63-156_209-239 DE Unplaced genomic scaffold supercont1.46, whole genome shotgun sequence #=GS A0A0D0X7F5/63-156_209-239 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; #=GS A0A0F7S169/72-167_212-242 AC A0A0F7S169 #=GS A0A0F7S169/72-167_212-242 OS Sporisorium scitamineum #=GS A0A0F7S169/72-167_212-242 DE Uncharacterized protein #=GS A0A0F7S169/72-167_212-242 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; #=GS E6ZP81/72-167_211-241 AC E6ZP81 #=GS E6ZP81/72-167_211-241 OS Sporisorium reilianum SRZ2 #=GS E6ZP81/72-167_211-241 DE Related to DEG1-pseudouridine synthase #=GS E6ZP81/72-167_211-241 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; #=GS Q5KC13/64-156_212-242 AC Q5KC13 #=GS Q5KC13/64-156_212-242 OS Cryptococcus neoformans var. neoformans JEC21 #=GS Q5KC13/64-156_212-242 DE Pseudouridylate synthase, putative #=GS Q5KC13/64-156_212-242 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; #=GS A0A095C7R9/51-144_197-227 AC A0A095C7R9 #=GS A0A095C7R9/51-144_197-227 OS Cryptococcus gattii VGII R265 #=GS A0A095C7R9/51-144_197-227 DE tRNA pseudouridine synthase #=GS A0A095C7R9/51-144_197-227 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; #=GS A0A0D0YZD9/63-156_208-238 AC A0A0D0YZD9 #=GS A0A0D0YZD9/63-156_208-238 OS Cryptococcus gattii VGIV IND107 #=GS A0A0D0YZD9/63-156_208-238 DE Unplaced genomic scaffold supercont2.3, whole genome shotgun sequence #=GS A0A0D0YZD9/63-156_208-238 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIV; #=GS A0A0D0VFN7/63-156_209-239 AC A0A0D0VFN7 #=GS A0A0D0VFN7/63-156_209-239 OS Cryptococcus gattii CA1280 #=GS A0A0D0VFN7/63-156_209-239 DE Unplaced genomic scaffold supercont1.17, whole genome shotgun sequence #=GS A0A0D0VFN7/63-156_209-239 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; #=GS J9VX59/63-155_208-238 AC J9VX59 #=GS J9VX59/63-155_208-238 OS Cryptococcus neoformans var. grubii H99 #=GS J9VX59/63-155_208-238 DE tRNA pseudouridine(38-40) synthase #=GS J9VX59/63-155_208-238 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; #=GS A0A2N8UIS6/72-167_211-241 AC A0A2N8UIS6 #=GS A0A2N8UIS6/72-167_211-241 OS Sporisorium reilianum f. sp. reilianum #=GS A0A2N8UIS6/72-167_211-241 DE Related to DEG1-pseudouridine synthase #=GS A0A2N8UIS6/72-167_211-241 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; #=GS A0A127Z4R8/72-167_212-242 AC A0A127Z4R8 #=GS A0A127Z4R8/72-167_212-242 OS Sporisorium scitamineum #=GS A0A127Z4R8/72-167_212-242 DE Related to DEG1-pseudouridine synthase #=GS A0A127Z4R8/72-167_212-242 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; #=GS E6RAG1/63-156_209-239 AC E6RAG1 #=GS E6RAG1/63-156_209-239 OS Cryptococcus gattii WM276 #=GS E6RAG1/63-156_209-239 DE Pseudouridylate synthase, putative #=GS E6RAG1/63-156_209-239 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; #=GS A0A0D0V1L0/51-144_197-227 AC A0A0D0V1L0 #=GS A0A0D0V1L0/51-144_197-227 OS Cryptococcus gattii VGII Ram5 #=GS A0A0D0V1L0/51-144_197-227 DE tRNA pseudouridine synthase #=GS A0A0D0V1L0/51-144_197-227 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; #=GS A0A225XZA8/63-155_208-238 AC A0A225XZA8 #=GS A0A225XZA8/63-155_208-238 OS Cryptococcus neoformans var. grubii c45 #=GS A0A225XZA8/63-155_208-238 DE tRNA pseudouridine(38-40) synthase #=GS A0A225XZA8/63-155_208-238 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; #=GS A0A226BBH2/63-155_208-238 AC A0A226BBH2 #=GS A0A226BBH2/63-155_208-238 OS Cryptococcus neoformans var. grubii Bt85 #=GS A0A226BBH2/63-155_208-238 DE tRNA pseudouridine(38-40) synthase #=GS A0A226BBH2/63-155_208-238 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; #=GS Q55NM5/64-156_212-242 AC Q55NM5 #=GS Q55NM5/64-156_212-242 OS Cryptococcus neoformans var. neoformans B-3501A #=GS Q55NM5/64-156_212-242 DE Uncharacterized protein #=GS Q55NM5/64-156_212-242 DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; #=GF SQ 20 Q54I97/75-159_211-241 -SNINFDKCYKRHVAFKLSYVGWPFFGFAAQDCSE---------ETIENYLIKAFLKTSLIP--------------------DIKTANYFKSGRTDKGVSAYGQVISLYVRSNL------------KYIKMLNGVLPPEIRILAWAPVPFHFNARFST A0A0D1CL90/78-172_219-249 -KEFDFASAPCRKIALRFSYDGAGYSGLAAQNTTV--PGSGSSLPTVEGVLWDALCTARLVDPA-----------------LGMDGAGFSRCGRTDRGVSAAGQVVALWVRSKK------------LYVQILNRILPSSIRIQAWSPVRSNFSSRFDC E3KHT7/94-213_247-277 KKELDFDRHPKRKIALMISYQGELHGGLAWQPDVT-------RLSTVEGELFRALLVARLVEGAGEFEEQEEEDSERWRGLVDLNKWGYSRAGRTDAGVSGAGQVVSLWVRSQLRSVPAPFGFLPPKYHTIINSILPNSVRVLAWSPVHHDFDARFSC F6R255/94-185_229-257 VSHL----TSVRRIALKVLYLGWDYVGYAFTKSSLAFSKPESISNVVERVLLEALLRQQLITGVGSV-------------------LNFDRAGRTDRQVSGLSQVVSVNVRSNL------------NYVSLLNQALPPDIRILAWSPVKKTFSPRY-- F0ZSG7/58-143_187-217 -PNVNFDKCHRRYVAFKVSYVGWPYHGFAAQDCTD---------ETIEGHLIKALKRTSLIS--------------------DIKTSNYAKSGRTDKGVSAFGQVISLYVRSNL-----------TEYVKMLNGVLPPEIRVLGWAPIPFHFNSRFST A0A0D0X7F5/63-156_209-239 -KAFHFPAHPTRHIALLISYHGWPYSGLALQAPATP---DGPPVPTVEAELLAALEKTRLIAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVINLWVRSSR------------RYPKLLNSVLPPSIRVLAWSPIPSSFDSRFSC A0A0F7S169/72-167_212-242 -KEFDFASSPCRKIALRFSYDGAGYSGLAAQNAVPR-GGSGSTLPTIEGVLWDALCTARLVDPA-----------------LGMDGAGFSRCGRTDRGVSAAGQVVAFWVRSKK------------LYVSILNRILPTSIRIQAWSPVRSNFSSRFDC E6ZP81/72-167_211-241 -KELDFASAPCRKIALRFSYDGAGYSGLAAQNAVAG-GGAGSTLPTVEGVLWDALCTARLVDPA-----------------LGMDGAGFSRCGRTDRGVSAAGQVVALWVRSKK------------LYVSILNRILPPSIRIQAWSPVRSNFSSRFDC Q5KC13/64-156_212-242 --PFHFPAHPTRHIALLISYHGWPYSGLALQAPATP---DGPPVPTVEAELLAALEKTRLIAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVVNLWVRSSR------------KYPKLLNSVLPPSIRILAWSPIPASFDSRFSC A0A095C7R9/51-144_197-227 -KAFHFPAHPTRHIALLISYHGWPYSGLALQAPATP---DGPPVPTVEAELLAALEKTRLIAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVINLWVRSSR------------RYPKLLNSVLPPSIRVLAWSPIPSSFDSRFSC A0A0D0YZD9/63-156_208-238 -KAFHFPAHPTRHIALLLSYHGWPYSGLALQAPATP---DGPPVPTVEAELLAALEKTRLVAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVINLWVRSSR------------RYPKLLNSVLPPSIRVLAWSPIPSSFDSRFSC A0A0D0VFN7/63-156_209-239 -KAFHFPAHPTRHIALLISYHGWPYSGLALQAPATP---DGPPVPTVEAELLAALEKTRLIAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVINLWVRSSR------------RYPKLLNSVLPPSIRVLAWSPIPSSFDSRFSC J9VX59/63-155_208-238 --PFHFPAHPTRHIALLISYHGWPYSGLALQAPATP---DGPPIPTVEAELLAALEKTRLIAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVVNLWVRSSR------------KYPKLLNSVLPPSIRILAWSPIPSSFDSRFSC A0A2N8UIS6/72-167_211-241 -KELDFASAPCRKIALRFSYDGAGYSGLAAQNAVAG-GGAGSTLPTVEGVLWDALCTARLVDPA-----------------LGMDGAGFSRCGRTDRGVSAAGQVVALWVRSKK------------LYVSILNRILPPSIRIQAWSPVRSNFSSRFDC A0A127Z4R8/72-167_212-242 -KEFDFASSPCRKIALRFSYDGAGYSGLAAQNAVPR-GGSGSTLPTIEGVLWDALCTARLVDPA-----------------LGMDGAGFSRCGRTDRGVSAAGQVVAFWVRSKK------------LYVSILNRILPTSIRIQAWSPVRSNFSSRFDC E6RAG1/63-156_209-239 -KAFHFPAHPTRHIALLISYHGWPYSGLALQAPATP---DGPPVPTVEAELLAALEKTRLIAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVINLWVRSSR------------RYPKLLNSVLPPSIRVLAWSPIPSSFDSRFSC A0A0D0V1L0/51-144_197-227 -KAFHFPAHPTRHIALLISYHGWPYSGLALQAPATP---DGPPVPTVEAELLAALEKTRLIAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVINLWVRSSR------------RYPKLLNSVLPPSIRVLAWSPIPSSFDSRFSC A0A225XZA8/63-155_208-238 --PFHFPAHPTRHIALLISYHGWPYSGLALQAPATP---DGPPIPTVEAELLAALEKTRLIAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVVNLWVRSSR------------KYPKLLNSVLPPSIRILAWSPIPSSFDSRFSC A0A226BBH2/63-155_208-238 --PFHFPAHPTRHIALLISYHGWPYSGLALQAPATP---DGPPIPTVEAELLAALEKTRLIAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVVNLWVRSSR------------KYPKLLNSVLPPSIRILAWSPIPSSFDSRFSC Q55NM5/64-156_212-242 --PFHFPAHPTRHIALLISYHGWPYSGLALQAPATP---DGPPVPTVEAELLAALEKTRLIAEG-----------------KGWEGCGFGRCGRTDRGVSGEGQVVNLWVRSSR------------KYPKLLNSVLPPSIRILAWSPIPASFDSRFSC #=GC scorecons 03354733463958974579394475969474444200024333577954944983456974330000000000000000025345467485999967996389975769994400000000000039456894699668975897974449569855 #=GC scorecons_70 _____*_____*_***__**_*__*_***_*______________***__*__**___***__________________________**_*_********__****_*_***_______________*___**_********_*****___*_***__ #=GC scorecons_80 _____*_____*_***__**_*__*_*_*_*______________***__*__**____*____________________________*_*_****_***__****_*_***_______________*___**__**__***_****____*__**__ #=GC scorecons_90 ___________*__*____*_*____*_*__________________*__*__**____*________________________________****__**___**____***_______________*___**__**__**__**_*____*__**__ //