# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000780
#=GF DE U2 small nuclear ribonucleoprotein B''
#=GF AC 3.30.70.330/FF/000780
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 71.801
#=GS 6j6qa00/28-111     AC P40567
#=GS 6j6qa00/28-111     OS Saccharomyces cerevisiae S288C
#=GS 6j6qa00/28-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 6j6qa00/28-111     DR CATH; 6j6q; a:28-111; 
#=GS 6j6qa00/28-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 6j6qa00/28-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS A0A1D8PEI3/26-124  AC A0A1D8PEI3
#=GS A0A1D8PEI3/26-124  OS Candida albicans SC5314
#=GS A0A1D8PEI3/26-124  DE U2 snRNP complex subunit
#=GS A0A1D8PEI3/26-124  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS A0A1D8PEI3/26-124  DR GO; GO:0000398; GO:0005686; GO:0030620; 
#=GS 6j6na00/28-111     AC P40567
#=GS 6j6na00/28-111     OS Saccharomyces cerevisiae S288C
#=GS 6j6na00/28-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 6j6na00/28-111     DR CATH; 6j6n; a:28-111; 
#=GS 6j6na00/28-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 6j6na00/28-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 6j6ha00/28-111     AC P40567
#=GS 6j6ha00/28-111     OS Saccharomyces cerevisiae S288C
#=GS 6j6ha00/28-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 6j6ha00/28-111     DR CATH; 6j6h; a:28-111; 
#=GS 6j6ha00/28-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 6j6ha00/28-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 6j6ga00/28-111     AC P40567
#=GS 6j6ga00/28-111     OS Saccharomyces cerevisiae S288C
#=GS 6j6ga00/28-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 6j6ga00/28-111     DR CATH; 6j6g; a:28-111; 
#=GS 6j6ga00/28-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 6j6ga00/28-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 6g90Y00/28-111     AC P40567
#=GS 6g90Y00/28-111     OS Saccharomyces cerevisiae S288C
#=GS 6g90Y00/28-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 6g90Y00/28-111     DR CATH; 6g90; Y:28-111; 
#=GS 6g90Y00/28-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 6g90Y00/28-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 6exnY00/24-111     AC P40567
#=GS 6exnY00/24-111     OS Saccharomyces cerevisiae S288C
#=GS 6exnY00/24-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 6exnY00/24-111     DR CATH; 6exn; Y:24-110; 
#=GS 6exnY00/24-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 6exnY00/24-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 6bk8r00/28-111     AC P40567
#=GS 6bk8r00/28-111     OS Saccharomyces cerevisiae S288C
#=GS 6bk8r00/28-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 6bk8r00/28-111     DR CATH; 6bk8; r:28-111; 
#=GS 6bk8r00/28-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 6bk8r00/28-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 5zwop00/29-111     AC P40567
#=GS 5zwop00/29-111     OS Saccharomyces cerevisiae S288C
#=GS 5zwop00/29-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 5zwop00/29-111     DR CATH; 5zwo; p:29-103; 
#=GS 5zwop00/29-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5zwop00/29-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 5ylzp00/29-111     AC P40567
#=GS 5ylzp00/29-111     OS Saccharomyces cerevisiae S288C
#=GS 5ylzp00/29-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 5ylzp00/29-111     DR CATH; 5ylz; p:29-111; 
#=GS 5ylzp00/29-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5ylzp00/29-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 5y88p00/29-111     AC P40567
#=GS 5y88p00/29-111     OS Saccharomyces cerevisiae S288C
#=GS 5y88p00/29-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 5y88p00/29-111     DR CATH; 5y88; p:29-111; 
#=GS 5y88p00/29-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5y88p00/29-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 5wsgX00/29-111     AC P40567
#=GS 5wsgX00/29-111     OS Saccharomyces cerevisiae S288C
#=GS 5wsgX00/29-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 5wsgX00/29-111     DR CATH; 5wsg; X:29-111; 
#=GS 5wsgX00/29-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5wsgX00/29-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 5lj5Y00/28-111     AC P40567
#=GS 5lj5Y00/28-111     OS Saccharomyces cerevisiae S288C
#=GS 5lj5Y00/28-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 5lj5Y00/28-111     DR CATH; 5lj5; Y:28-111; 
#=GS 5lj5Y00/28-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5lj5Y00/28-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 5lj3Y00/28-111     AC P40567
#=GS 5lj3Y00/28-111     OS Saccharomyces cerevisiae S288C
#=GS 5lj3Y00/28-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 5lj3Y00/28-111     DR CATH; 5lj3; Y:28-111; 
#=GS 5lj3Y00/28-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5lj3Y00/28-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS 5gmka00/29-111     AC P40567
#=GS 5gmka00/29-111     OS Saccharomyces cerevisiae S288C
#=GS 5gmka00/29-111     DE U2 small nuclear ribonucleoprotein B''
#=GS 5gmka00/29-111     DR CATH; 5gmk; a:29-111; 
#=GS 5gmka00/29-111     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5gmka00/29-111     DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS P40567/28-111      AC P40567
#=GS P40567/28-111      OS Saccharomyces cerevisiae S288C
#=GS P40567/28-111      DE U2 small nuclear ribonucleoprotein B''
#=GS P40567/28-111      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P40567/28-111      DR GO; GO:0000398; GO:0030620; GO:0071004; 
#=GS R9X9G5/28-114      AC R9X9G5
#=GS R9X9G5/28-114      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9X9G5/28-114      DE AaceriAAR022Wp
#=GS R9X9G5/28-114      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS Q75EQ7/28-114      AC Q75EQ7
#=GS Q75EQ7/28-114      OS Eremothecium gossypii ATCC 10895
#=GS Q75EQ7/28-114      DE AAR022Wp
#=GS Q75EQ7/28-114      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS H0GI26/28-111      AC H0GI26
#=GS H0GI26/28-111      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GI26/28-111      DE Msl1p
#=GS H0GI26/28-111      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS J5P9M7/28-111      AC J5P9M7
#=GS J5P9M7/28-111      OS Saccharomyces kudriavzevii IFO 1802
#=GS J5P9M7/28-111      DE MSL1-like protein
#=GS J5P9M7/28-111      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS A0A0L8RHR6/28-111  AC A0A0L8RHR6
#=GS A0A0L8RHR6/28-111  OS Saccharomyces eubayanus
#=GS A0A0L8RHR6/28-111  DE MSL1-like protein
#=GS A0A0L8RHR6/28-111  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS A6ZVS8/28-111      AC A6ZVS8
#=GS A6ZVS8/28-111      OS Saccharomyces cerevisiae YJM789
#=GS A6ZVS8/28-111      DE U2 snRNP component
#=GS A6ZVS8/28-111      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GJG3/28-111      AC C7GJG3
#=GS C7GJG3/28-111      OS Saccharomyces cerevisiae JAY291
#=GS C7GJG3/28-111      DE Msl1p
#=GS C7GJG3/28-111      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WGF5/28-111      AC G2WGF5
#=GS G2WGF5/28-111      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WGF5/28-111      DE K7_Msl1p
#=GS G2WGF5/28-111      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P1S1/28-111      AC N1P1S1
#=GS N1P1S1/28-111      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P1S1/28-111      DE Msl1p
#=GS N1P1S1/28-111      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LTK0/28-111      AC B3LTK0
#=GS B3LTK0/28-111      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LTK0/28-111      DE U2 snRNP component
#=GS B3LTK0/28-111      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8ZAQ8/28-111      AC C8ZAQ8
#=GS C8ZAQ8/28-111      OS Saccharomyces cerevisiae EC1118
#=GS C8ZAQ8/28-111      DE Msl1p
#=GS C8ZAQ8/28-111      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GWF8/28-111      AC H0GWF8
#=GS H0GWF8/28-111      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GWF8/28-111      DE Msl1p
#=GS H0GWF8/28-111      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS C4YDE4/26-124      AC C4YDE4
#=GS C4YDE4/26-124      OS Candida albicans WO-1
#=GS C4YDE4/26-124      DE Uncharacterized protein
#=GS C4YDE4/26-124      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GF SQ 29
6j6qa00/28-111             ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
A0A1D8PEI3/26-124          VNLKPSQTLYVKNLNTKINKKILLHNLYLLFSAFGDIISINLQ----NGFAFIIFSNLNSATLALRNLKNQDFFDKPLVLNYAVKESKVISQEKQKLQDDNDE
6j6na00/28-111             ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
6j6ha00/28-111             ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
6j6ga00/28-111             ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
6g90Y00/28-111             ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
6exnY00/24-111             --TEAKNTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
6bk8r00/28-111             ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
5zwop00/29-111             -------TLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
5ylzp00/29-111             -------TLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
5y88p00/29-111             -------TLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
5wsgX00/29-111             -------TLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
5lj5Y00/28-111             ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
5lj3Y00/28-111             ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
5gmka00/29-111             -------TLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
P40567/28-111              ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
R9X9G5/28-114              --GMPRNTLYVSNLNDQIKSNTLKTNLYLLFSTFGEVVKIAMS-PKLRGQAFVVLSTVDEANLAMISLKDESFFGKPLRIQFSKSDMKEV-------------
Q75EQ7/28-114              --GMPRSTLYISNLNDQVKISTLRTNLYLLFSTFGEVLRIAMS-PKLRGQAFVVLSTVDEANLAMISLKDESFFGKPLRIQFSKSDMKEV-------------
H0GI26/28-111              ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
J5P9M7/28-111              ------NTLYVSQLNEKINVQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFVTMRTIDQASLAQISLNGELFFDKTLKVEFSKNETKTL-------------
A0A0L8RHR6/28-111          ------NTLYVSQLNEKINTQRLRMNLFLLFSTFGEVLKVSINFKKQRGQAFITLRTIDQASLAQISLNDELFFGKPLRVEFSKSETKTL-------------
A6ZVS8/28-111              ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
C7GJG3/28-111              ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
G2WGF5/28-111              ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
N1P1S1/28-111              ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
B3LTK0/28-111              ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
C8ZAQ8/28-111              ------NTLYVSQLNEKINMQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSKSETKTL-------------
H0GWF8/28-111              ------NTLYVSQLNEKINVQRLRVNLFLLFATFGEVLKVSMNFKKQRGQAFVTMRTIDQASLAQISLNGELFFDKTLKVEFSKNETKTL-------------
C4YDE4/26-124              VNLKPSQTLYVKNLNTKINKKILLHNLYLLFSAFGDIISINLQ----NGFAFIIFSNLNSATLALRNLKNQDFFDKPLVLNYAVKESKVISQEKQKLQDDNDE
#=GC scorecons             0000104999865995787454954997999669977657565234369599755566659599456965649969894657655759460000000000000
#=GC scorecons_70          _______****__**_***___*__******_******_*_*_____**_***___*_*_*_**__**__*_******___**__*_*_______________
#=GC scorecons_80          _______****__**_***___*__******__****___________*_***_______*_**___*____**_***___*___*_*_______________
#=GC scorecons_90          _______****__**__*____*__**_***__**_____________*_**________*_**___*____**_***_________*_______________
//