# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/000721
#=GF DE Nuclear polyadenylated RNA-binding protein 4
#=GF AC 3.30.70.330/FF/000721
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 53.153
#=GS 2km8C02/87-167      AC Q99383
#=GS 2km8C02/87-167      OS Saccharomyces cerevisiae S288C
#=GS 2km8C02/87-167      DE Nuclear polyadenylated RNA-binding protein 4
#=GS 2km8C02/87-167      DR CATH; 2km8; C:242-322; 
#=GS 2km8C02/87-167      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2km8C02/87-167      DR GO; GO:0003723; GO:0003729; GO:0005515; GO:0005634; GO:0005737; GO:0005849; GO:0006378; GO:0010494; GO:0072423; GO:0098789; 
#=GS 2cjkA02/87-167      AC Q99383
#=GS 2cjkA02/87-167      OS Saccharomyces cerevisiae S288C
#=GS 2cjkA02/87-167      DE Nuclear polyadenylated RNA-binding protein 4
#=GS 2cjkA02/87-167      DR CATH; 2cjk; A:242-322; 
#=GS 2cjkA02/87-167      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 2cjkA02/87-167      DR GO; GO:0003723; GO:0003729; GO:0005515; GO:0005634; GO:0005737; GO:0005849; GO:0006378; GO:0010494; GO:0072423; GO:0098789; 
#=GS Q99383/240-355      AC Q99383
#=GS Q99383/240-355      OS Saccharomyces cerevisiae S288C
#=GS Q99383/240-355      DE Nuclear polyadenylated RNA-binding protein 4
#=GS Q99383/240-355      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS Q99383/240-355      DR GO; GO:0003723; GO:0003729; GO:0005515; GO:0005634; GO:0005737; GO:0005849; GO:0006378; GO:0010494; GO:0072423; GO:0098789; 
#=GS Q5ANB5/242-353      AC Q5ANB5
#=GS Q5ANB5/242-353      OS Candida albicans SC5314
#=GS Q5ANB5/242-353      DE Uncharacterized protein
#=GS Q5ANB5/242-353      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GS A0A0L8RIE3/242-361  AC A0A0L8RIE3
#=GS A0A0L8RIE3/242-361  OS Saccharomyces eubayanus
#=GS A0A0L8RIE3/242-361  DE HRP1-like protein
#=GS A0A0L8RIE3/242-361  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS H0H0P5/243-359      AC H0H0P5
#=GS H0H0P5/243-359      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0H0P5/243-359      DE Hrp1p
#=GS H0H0P5/243-359      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A0A0L8VIS4/240-355  AC A0A0L8VIS4
#=GS A0A0L8VIS4/240-355  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VIS4/240-355  DE HRP1p Subunit of cleavage factor I
#=GS A0A0L8VIS4/240-355  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS J8Q2I9/242-360      AC J8Q2I9
#=GS J8Q2I9/242-360      OS Saccharomyces arboricola H-6
#=GS J8Q2I9/242-360      DE Hrp1p
#=GS J8Q2I9/242-360      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; 
#=GS B9WEA4/266-378      AC B9WEA4
#=GS B9WEA4/266-378      OS Candida dubliniensis CD36
#=GS B9WEA4/266-378      DE Nuclear polyadenylated RNA-binding protein, putative
#=GS B9WEA4/266-378      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; 
#=GS H0GN12/239-355      AC H0GN12
#=GS H0GN12/239-355      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GN12/239-355      DE Hrp1p
#=GS H0GN12/239-355      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS A6ZN88/240-355      AC A6ZN88
#=GS A6ZN88/240-355      OS Saccharomyces cerevisiae YJM789
#=GS A6ZN88/240-355      DE Cleavage and polyadenylation factor CF I component involved in pre-mRNA 3'-end processing
#=GS A6ZN88/240-355      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LIU3/240-355      AC B3LIU3
#=GS B3LIU3/240-355      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LIU3/240-355      DE Nuclear polyadenylated RNA-binding protein 4
#=GS B3LIU3/240-355      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GV00/240-355      AC C7GV00
#=GS C7GV00/240-355      OS Saccharomyces cerevisiae JAY291
#=GS C7GV00/240-355      DE Hrp1p
#=GS C7GV00/240-355      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VRD4/240-355      AC B5VRD4
#=GS B5VRD4/240-355      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VRD4/240-355      DE YOL123Wp-like protein
#=GS B5VRD4/240-355      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8ZHJ3/239-355      AC C8ZHJ3
#=GS C8ZHJ3/239-355      OS Saccharomyces cerevisiae EC1118
#=GS C8ZHJ3/239-355      DE Hrp1p
#=GS C8ZHJ3/239-355      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1NVX5/240-355      AC N1NVX5
#=GS N1NVX5/240-355      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1NVX5/240-355      DE Hrp1p
#=GS N1NVX5/240-355      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WMB4/240-355      AC G2WMB4
#=GS G2WMB4/240-355      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WMB4/240-355      DE K7_Hrp1p
#=GS G2WMB4/240-355      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C4YNP6/242-353      AC C4YNP6
#=GS C4YNP6/242-353      OS Candida albicans WO-1
#=GS C4YNP6/242-353      DE Uncharacterized protein
#=GS C4YNP6/242-353      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; 
#=GF SQ 18
2km8C02/87-167              ---TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--H----------------------------------------------
2cjkA02/87-167              ---TGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--H----------------------------------------------
Q99383/240-355              -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGNNGG----N---NMNRRGGNFGNQGDFNQM-----
Q5ANB5/242-353              QEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPRGQHNQQV-------------------MMQQQQQQQQQQA-QQQAQQQAM
A0A0L8RIE3/242-361          -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNGGNNNAGGNNSGNSGNMNRRGGNFGNQGDF--------
H0H0P5/243-359              -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGTNTG----SN-GNMNRRGGNFGNQGDFNQ------
A0A0L8VIS4/240-355          -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGNNGG----N---NMNRRGGNFGNQGDFNQM-----
J8Q2I9/242-360              -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQKSSSNNAGSNSG----NNGGNMNRRGGNFGNQGDFNQ------
B9WEA4/266-378              QEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPRGQHNQQV-------------------MMQQQQQQQAQQAQQQQAQQQAM
H0GN12/239-355              QDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGNNGG----N---NMNRRGGNFGNQGDFNQM-----
A6ZN88/240-355              -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGNNGG----N---NMNRRGGNFGNQGDFNQM-----
B3LIU3/240-355              -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGNNGG----N---NMNRRGGNFGNQGDFNQM-----
C7GV00/240-355              -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGNNGG----N---NMNRRGGNFGNQGDFNQM-----
B5VRD4/240-355              -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGNNGG----N---NMNRRGGNFGNQGDFNQM-----
C8ZHJ3/239-355              QDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGNNGG----N---NMNRRGGNFGNQGDFNQM-----
N1NVX5/240-355              -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGNNGG----N---NMNRRGGNFGNQGDFNQM-----
G2WMB4/240-355              -DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR--HMQQK-SSNNGGNNGG----N---NMNRRGGNFGNQGDFNQM-----
C4YNP6/242-353              QEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRAAPRGQHNQQV-------------------MMQQQQQQQQQQA-QQQAQQQAM
#=GC scorecons              145699999999695955699769999595999599969999969999999999965999799599765696757979995990093553022211112120000100035344333333542335200000
#=GC scorecons_70           ____**********_*__*********_*_***_**********************_******_****_****_******_**__*______________________________________________
#=GC scorecons_80           ____********_*_*___***_****_*_***_***_*****_***********__******_***___*_*__*****_**__*______________________________________________
#=GC scorecons_90           ____********_*_*___**__****_*_***_***_*****_***********__***_**_**____*____*_***_**__*______________________________________________
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