# STOCKHOLM 1.0
#=GF ID 3.30.70.2850/FF/000010
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 3.30.70.2850/FF/000010
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 48.003
#=GS G5ED21/1311-1551                AC G5ED21
#=GS G5ED21/1311-1551                OS Caenorhabditis elegans
#=GS G5ED21/1311-1551                DE DNA-directed RNA polymerase subunit
#=GS G5ED21/1311-1551                DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS A0A2A6B3R6/1312-1469_1507-1562  AC A0A2A6B3R6
#=GS A0A2A6B3R6/1312-1469_1507-1562  OS Pristionchus pacificus
#=GS A0A2A6B3R6/1312-1469_1507-1562  DE DNA-directed RNA polymerase subunit
#=GS A0A2A6B3R6/1312-1469_1507-1562  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS A8XYH3/1328-1566                AC A8XYH3
#=GS A8XYH3/1328-1566                OS Caenorhabditis briggsae
#=GS A8XYH3/1328-1566                DE DNA-directed RNA polymerase subunit
#=GS A8XYH3/1328-1566                DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS H3FM78/1330-1487_1525-1580      AC H3FM78
#=GS H3FM78/1330-1487_1525-1580      OS Pristionchus pacificus
#=GS H3FM78/1330-1487_1525-1580      DE DNA-directed RNA polymerase subunit
#=GS H3FM78/1330-1487_1525-1580      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GF SQ 4
G5ED21/1311-1551                        VYLKQLLKNFSLEEKITLTQNQSCRRYHLRIDILAAEKRELGARHLKRSQIMEEIEKRFILRVAQAIKKKYHEITDYQQMSHRTMRQGNMAAGI---ETGGTKNRGLQGPDNGDSSDEEADGGREADAAEARLHRRHRDEGADYEGEDEERVEVRE-EEEPMDSDSEDVKKEGLDGEDQTTEPLLVNSSRIQSVQRLSENISSYTYDVKSNKWCEVVFELPLRNKTKMDVSSIVEKEVELFIVHQ
A0A2A6B3R6/1312-1469_1507-1562          VYLKHLISRFTIDEHVILKPSKGTRMYTIRFDLLASAKREPAVRYVKRYVVMREIEKRFIKSVVGTMDRRRVDVKNHTQIQHRKLREGNLAAGVSGGDEDREPSSRRRAADDGESSDEEAEGGKEADADEKRLNNRHRDD-AEYDGEDEEKRATNEEKD----------------------------NERITAVIKQANSIADYRVDA-NDRWCEVVIKVGL-GESKLDVATLIEREVDSFIVTQ
A8XYH3/1328-1566                        VYLKQLLKNFSMEEKITLTQNQSTRRYHLRIEILAAEKREQGARHLKRSKIMDEIEKRFILRVSHAIKKKYLDITDYQQMSHRTMRQGNIAAGI---DTQRGKSRGLQGPDNGDSSDEEAEGGREADAAEARLHQRHRDEAADYEGEDEERVEVRERDDEPMDSDTEDVKNEEDDENKNDKKDPMVNSSRIQAVQRLSDNISSYTYDVKSNKWCEVVFELPLRNKTKMDVSSIVERFVSACF---
H3FM78/1330-1487_1525-1580              VYLKHLISRFTIDEHVILKPSKGTRMYTIRFDLLASAKREPAVRYVKRYVVMREIEKRFIKSVVGTMDRRRVDVKNHTQIQHRKLREGNLAAGVSGGDEDREPSSRRRAADDGESSDEEAEGGKEADADEKRLNNRHRDD-AEYDGEDEEKRATNEEKD----------------------------NERITAVIKQANSIADYRVDA-NDRWCEVVIKVGL-GESKLDVATLIEREVDSFIVTQ
#=GC scorecons                          99996954595569565945555594945957599549993559659942694999999934933565664376456496499469599599961117435346453555959699999979969999494995499996096969999963455924711111101111010010000000000115499469364545955943951556999995554915559699555697494355424
#=GC scorecons_70                       ****_*___*__**_*_*______*_*__*_*_**__***___**_**__**_*******__*_____**__**__*_*__**__*_**_****___*____________*_****************_*_**__*****_**********____*__*______________________________**__*_*____*__*__*____******____*____*_**___***_*_______
#=GC scorecons_80                       ****_*___*___*___*______*_*__*___**__***___*__**___*_*******__*_______________*__**__*_**_***_________________*_*_******_**_****_*_**__****__*_*_*****_____*_________________________________**__*______*__*__*_____*****____*____*_**____*__*_______
#=GC scorecons_90                       ****_*___*___*___*______*_*__*___**__***___*__**___*_*******__*_______________*__**__*_**_***_________________*_*_******_**_****_*_**__****__*_*_*****_____*_________________________________**__*______*__*__*_____*****____*____*_**____*__*_______
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