# STOCKHOLM 1.0 #=GF ID 3.30.70.270/FF/000066 #=GF DE Endogenous retrovirus group K member 6 Pol protein #=GF AC 3.30.70.270/FF/000066 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 76.024 #=GS P63132/103-127_169-221 AC P63132 #=GS P63132/103-127_169-221 OS Homo sapiens #=GS P63132/103-127_169-221 DE Endogenous retrovirus group K member 113 Pol protein #=GS P63132/103-127_169-221 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS P63132/103-127_169-221 DR EC; 2.7.7.49; 3.1.26.4; #=GS Q7SQ98/88-112_154-211 AC Q7SQ98 #=GS Q7SQ98/88-112_154-211 OS Avian leukosis virus #=GS Q7SQ98/88-112_154-211 DE Pol polyprotein #=GS Q7SQ98/88-112_154-211 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Avian leukosis virus; #=GS Q7SQ98/88-112_154-211 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS P10266/103-127_169-220 AC P10266 #=GS P10266/103-127_169-220 OS Homo sapiens #=GS P10266/103-127_169-220 DE Endogenous retrovirus group K member 10 Pol protein #=GS P10266/103-127_169-220 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS P10266/103-127_169-220 DR EC; 2.7.7.49; 3.1.26.4; #=GS Q9UQG0/103-127_169-221 AC Q9UQG0 #=GS Q9UQG0/103-127_169-221 OS Homo sapiens #=GS Q9UQG0/103-127_169-221 DE Endogenous retrovirus group K member 11 Pol protein #=GS Q9UQG0/103-127_169-221 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS Q9UQG0/103-127_169-221 DR EC; 2.7.7.49; 3.1.26.4; #=GS P63136/103-127_169-221 AC P63136 #=GS P63136/103-127_169-221 OS Homo sapiens #=GS P63136/103-127_169-221 DE Endogenous retrovirus group K member 25 Pol protein #=GS P63136/103-127_169-221 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS P63136/103-127_169-221 DR EC; 2.7.7.49; 3.1.26.4; #=GS Q9BXR3/103-127_169-221 AC Q9BXR3 #=GS Q9BXR3/103-127_169-221 OS Homo sapiens #=GS Q9BXR3/103-127_169-221 DE Endogenous retrovirus group K member 6 Pol protein #=GS Q9BXR3/103-127_169-221 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS Q9BXR3/103-127_169-221 DR EC; 2.7.7.49; 3.1.26.4; #=GS P63135/103-127_169-218 AC P63135 #=GS P63135/103-127_169-218 OS Homo sapiens #=GS P63135/103-127_169-218 DE Endogenous retrovirus group K member 7 Pol protein #=GS P63135/103-127_169-218 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS P63135/103-127_169-218 DR EC; 2.7.7.49; 3.1.26.4; #=GS P63133/103-127_169-218 AC P63133 #=GS P63133/103-127_169-218 OS Homo sapiens #=GS P63133/103-127_169-218 DE Endogenous retrovirus group K member 8 Pol protein #=GS P63133/103-127_169-218 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS P63133/103-127_169-218 DR EC; 2.7.7.49; 3.1.26.4; #=GS Q9QC07/103-127_169-221 AC Q9QC07 #=GS Q9QC07/103-127_169-221 OS Homo sapiens #=GS Q9QC07/103-127_169-221 DE Endogenous retrovirus group K member 18 Pol protein #=GS Q9QC07/103-127_169-221 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS Q9QC07/103-127_169-221 DR EC; 2.7.7.49; 3.1.26.4; #=GS Q9WJR5/106-130_172-217 AC Q9WJR5 #=GS Q9WJR5/106-130_172-217 OS Homo sapiens #=GS Q9WJR5/106-130_172-217 DE Endogenous retrovirus group K member 19 Pol protein #=GS Q9WJR5/106-130_172-217 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS Q9WJR5/106-130_172-217 DR EC; 2.7.7.49; 3.1.26.4; #=GS V9H0H3/1026-1050_1092-1143 AC V9H0H3 #=GS V9H0H3/1026-1050_1092-1143 OS Homo sapiens #=GS V9H0H3/1026-1050_1092-1143 DE Gag-Pro-Pol-Env protein #=GS V9H0H3/1026-1050_1092-1143 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS P03354/796-820_862-919 AC P03354 #=GS P03354/796-820_862-919 OS Rous sarcoma virus - Prague C #=GS P03354/796-820_862-919 DE Gag-Pol polyprotein #=GS P03354/796-820_862-919 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS P03354/796-820_862-919 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS K7E0H7/8-32_74-128 AC K7E0H7 #=GS K7E0H7/8-32_74-128 OS Monodelphis domestica #=GS K7E0H7/8-32_74-128 DE Uncharacterized protein #=GS K7E0H7/8-32_74-128 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; #=GS Q04095/796-820_862-919 AC Q04095 #=GS Q04095/796-820_862-919 OS Rous sarcoma virus (strain Schmidt-Ruppin A) #=GS Q04095/796-820_862-919 DE Gag-Pol polyprotein #=GS Q04095/796-820_862-919 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS Q04095/796-820_862-919 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS O92956/796-820_862-919 AC O92956 #=GS O92956/796-820_862-919 OS Rous sarcoma virus - Schmidt-Ruppin B #=GS O92956/796-820_862-919 DE Gag-Pol polyprotein #=GS O92956/796-820_862-919 DR ORG; Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Alpharetrovirus; Rous sarcoma virus; #=GS O92956/796-820_862-919 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GF SQ 15 P63132/103-127_169-221 QPGLPSPAMIPKDWPLIIIDLKDCFPTICQTFVGRALQPVRDKFSDCYIIHYIDDILCAAETKDKL----IDCYTFLQAE-VA Q7SQ98/88-112_154-211 QQGAPVLSALPRGWPLMVLDLKDCFPTICQLVVGQVLEPLRLKHPSLRMLHYMDDLLLAASSHDGLEAAGEEVISTLERAGFT P10266/103-127_169-220 QPGLPSPAMIPKDWPLIIIDLKDCFPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETKDKL----IDCYTFLQAE-V- Q9UQG0/103-127_169-221 QPGLPSPAMIPKDWPLIIIDLKDCFPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETKDKL----IDCYTFLQAE-VA P63136/103-127_169-221 QPGLPSPAMIPKDWPLIIIDLKDCFPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETKDKL----IDCYTFLQAE-VA Q9BXR3/103-127_169-221 QPGLPSPAMIPKDWPLIIIDLKDCFPTICQTFVGRALQPVREKFSDCYIIHCIDDILCAAETKDKL----IDCYTFLQAE-VA P63135/103-127_169-218 QPGLPSPAMIPKDWPLIIIDLKDCFPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETRDKL----IDCYTFLQA---- P63133/103-127_169-218 QPGLPSPAMIPKDWPLIIIDLKDCFPTICQTFVGRALQPVRKKFSDCYIIHYIDDILCAAETKDKL----IDCYTFLQA---- Q9QC07/103-127_169-221 QPGLPSPAMIPKDWPLIIIDLKDCFPTICQTFVGRALQPVRDKFSDCYIIHYFDDILCAAETKDKL----IDCYTFLQAE-VA Q9WJR5/106-130_172-217 QPGLPSLAMIPKDWPLIIIDLKDCFPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAEMKDKL----IDCYT-------- V9H0H3/1026-1050_1092-1143 QPGLPSPAMIPKDWPLIIIDLKDCFPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETKDKL----IDCYTFLQAE-V- P03354/796-820_862-919 QQGAPVLSALPRGWPLMVLDLKDCFPTICQLVVGQVLEPLRLKHPSLCMLHYMDDLLLAASSHDGLEAAGEEVISTLERAGFT K7E0H7/8-32_74-128 QPGLPSPTAIPKGFSKIVIDIKDCFPTLCQKFVAQSIDPVRTRYPSAYIIHYMDDLLIAAPSPPLTQTIAQTIICALQAR--- Q04095/796-820_862-919 QQGAPVLSALPRGWPLMVLDLKDCFPTICQLVVGQVLEPLRLKHPSLRMLHYMDDLLLAASSHDGLEAAGEEVISTLERAGFT O92956/796-820_862-919 QQGAPVLSALPRGWPLMVLDLKDCFPTICQLVVGQVLEPLRLKHPSLRMLHYMDDLLLAASSHDGLEAAGEEVINTLERAGFT #=GC scorecons 95959555569767776769799999979945976575969385654566986996949945574711114645537543122 #=GC scorecons_70 *_*_*____***_*****************__***_*_***_*_____*********_**___*_*__________*______ #=GC scorecons_80 *_*_*_____*__***___***********__**__*_*_*_*_______**_**_*_**___*_*__________*______ #=GC scorecons_90 *_*_*_____*________*_******_**__*_____*_*_*_______**_**_*_**_______________________ //