# STOCKHOLM 1.0
#=GF ID 3.30.70.270/FF/000053
#=GF DE DNA polymerase IV
#=GF AC 3.30.70.270/FF/000053
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 75.369
#=GS Q9JRG1/117-171      AC Q9JRG1
#=GS Q9JRG1/117-171      OS Neisseria meningitidis Z2491
#=GS Q9JRG1/117-171      DE DNA polymerase IV
#=GS Q9JRG1/117-171      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis; 
#=GS Q9JRG1/117-171      DR EC; 2.7.7.7; 
#=GS C8VHQ1/228-280      AC C8VHQ1
#=GS C8VHQ1/228-280      OS Aspergillus nidulans FGSC A4
#=GS C8VHQ1/228-280      DE DNA-directed polymerase kappa, putative (AFU_orthologue AFUA_7G01270)
#=GS C8VHQ1/228-280      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS Q5B7V7/225-277      AC Q5B7V7
#=GS Q5B7V7/225-277      OS Aspergillus nidulans FGSC A4
#=GS Q5B7V7/225-277      DE Uncharacterized protein
#=GS Q5B7V7/225-277      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS V5IKZ4/241-296      AC V5IKZ4
#=GS V5IKZ4/241-296      OS Neurospora crassa OR74A
#=GS V5IKZ4/241-296      DE DNA-directed polymerase kappa
#=GS V5IKZ4/241-296      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS Q0V5A3/1-57         AC Q0V5A3
#=GS Q0V5A3/1-57         OS Parastagonospora nodorum SN15
#=GS Q0V5A3/1-57         DE Uncharacterized protein
#=GS Q0V5A3/1-57         DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora; Parastagonospora nodorum; 
#=GS Q5F8N2/117-171      AC Q5F8N2
#=GS Q5F8N2/117-171      OS Neisseria gonorrhoeae FA 1090
#=GS Q5F8N2/117-171      DE DNA polymerase IV
#=GS Q5F8N2/117-171      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria gonorrhoeae; 
#=GS Q5F8N2/117-171      DR EC; 2.7.7.7; 
#=GS D2ZVS2/117-171      AC D2ZVS2
#=GS D2ZVS2/117-171      OS Neisseria mucosa ATCC 25996
#=GS D2ZVS2/117-171      DE DNA polymerase IV
#=GS D2ZVS2/117-171      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria mucosa; 
#=GS F9EXR1/117-171      AC F9EXR1
#=GS F9EXR1/117-171      OS Neisseria macacae ATCC 33926
#=GS F9EXR1/117-171      DE DNA polymerase IV
#=GS F9EXR1/117-171      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria macacae; 
#=GS C6M9B1/117-171      AC C6M9B1
#=GS C6M9B1/117-171      OS Neisseria sicca ATCC 29256
#=GS C6M9B1/117-171      DE DNA polymerase IV
#=GS C6M9B1/117-171      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria sicca; 
#=GS G3Z6J0/117-171      AC G3Z6J0
#=GS G3Z6J0/117-171      OS Neisseria sp. GT4A_CT1
#=GS G3Z6J0/117-171      DE DNA polymerase IV
#=GS G3Z6J0/117-171      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria sp. GT4A_CT1; 
#=GS A0A2I1BYF1/228-280  AC A0A2I1BYF1
#=GS A0A2I1BYF1/228-280  OS Aspergillus novofumigatus IBT 16806
#=GS A0A2I1BYF1/228-280  DE Putative DNA-directed polymerase kappa
#=GS A0A2I1BYF1/228-280  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus novofumigatus; 
#=GS F8MU09/241-296      AC F8MU09
#=GS F8MU09/241-296      OS Neurospora tetrasperma FGSC 2508
#=GS F8MU09/241-296      DE Uncharacterized protein
#=GS F8MU09/241-296      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS A0A0B0DYK9/241-296  AC A0A0B0DYK9
#=GS A0A0B0DYK9/241-296  OS Neurospora crassa
#=GS A0A0B0DYK9/241-296  DE Uncharacterized protein
#=GS A0A0B0DYK9/241-296  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora crassa; 
#=GS G4UVR5/241-296      AC G4UVR5
#=GS G4UVR5/241-296      OS Neurospora tetrasperma FGSC 2509
#=GS G4UVR5/241-296      DE DNA/RNA polymerase
#=GS G4UVR5/241-296      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae; Neurospora; Neurospora tetrasperma; 
#=GS Q9JYS8/117-171      AC Q9JYS8
#=GS Q9JYS8/117-171      OS Neisseria meningitidis MC58
#=GS Q9JYS8/117-171      DE DNA polymerase IV
#=GS Q9JYS8/117-171      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis; 
#=GS Q9JYS8/117-171      DR EC; 2.7.7.7; 
#=GS A0A1D3J393/117-171  AC A0A1D3J393
#=GS A0A1D3J393/117-171  OS Neisseria gonorrhoeae
#=GS A0A1D3J393/117-171  DE DNA polymerase IV
#=GS A0A1D3J393/117-171  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria gonorrhoeae; 
#=GS A0A1D3J393/117-171  DR EC; 2.7.7.7; 
#=GS A1KUQ3/117-171      AC A1KUQ3
#=GS A1KUQ3/117-171      OS Neisseria meningitidis FAM18
#=GS A1KUQ3/117-171      DE DNA polymerase IV
#=GS A1KUQ3/117-171      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis; 
#=GS A1KUQ3/117-171      DR EC; 2.7.7.7; 
#=GS A0A0Y6VDC6/117-171  AC A0A0Y6VDC6
#=GS A0A0Y6VDC6/117-171  OS Neisseria meningitidis
#=GS A0A0Y6VDC6/117-171  DE DNA polymerase IV
#=GS A0A0Y6VDC6/117-171  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis; 
#=GS A0A0Y6VDC6/117-171  DR EC; 2.7.7.7; 
#=GF SQ 18
Q9JRG1/117-171              -IPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHK---VM
C8VHQ1/228-280              ------EAVSRMRAEILEKTKISVSAGIAANAKIAKICSNRNKPNGQFRVPNEKNAIME
Q5B7V7/225-277              ------EAVSRMRAEILEKTKISVSAGIAANAKIAKICSNRNKPNGQFRVPNEKNAIME
V5IKZ4/241-296              -AP--ADAVAKMRNDIHERTSITVSAGIAANTRLAKICSNMNKPNGQYVLPSERVAILE
Q0V5A3/1-57                 MTP--EEAVSQLRADVHERAKITVSAGIAANAKLAKICSNKNKPNGQFFLPSDRQTIME
Q5F8N2/117-171              -IPYAGEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHK---VM
D2ZVS2/117-171              -IPYASEVATEIRAAIFAEIGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHK---IM
F9EXR1/117-171              -IPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHK---VM
C6M9B1/117-171              -IPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHK---VM
G3Z6J0/117-171              -IPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHK---VM
A0A2I1BYF1/228-280          ------EAVSRMRAEILETTKISVSAGIAANAKIAKICSNRNKPNGQFRVPNEREAVME
F8MU09/241-296              -AP--ADAVAKMRSDIHERTSITVSAGIAANTRLAKICSNMNKPNGQYVLPSERGAILE
A0A0B0DYK9/241-296          -AP--ADAVAKMRNDIHERTSITVSAGIAANTRLAKICSNMNKPNGQYVLPSERVAILE
G4UVR5/241-296              -AP--ADAVAKMRSDIHERTSITVSAGIAANTRLAKICSNMNKPNGQYVLPSERGAILE
Q9JYS8/117-171              -IPYAGDVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHK---VM
A0A1D3J393/117-171          -IPYAGEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHK---VM
A1KUQ3/117-171              -IPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHK---VM
A0A0Y6VDC6/117-171          -IPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQFVLPPHK---VM
#=GC scorecons              03511276645696484557467699999694379995963599999757955702254
#=GC scorecons_70           ______*____***_*___*_**_*****_*__****_**__******_**__*_____
#=GC scorecons_80           ______*_____*__*___*____*****_*__****_*___******_**________
#=GC scorecons_90           ____________*__*________*****_*___***_*___*****___*________
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