# STOCKHOLM 1.0 #=GF ID 3.30.70.270/FF/000051 #=GF DE Genome polyprotein #=GF AC 3.30.70.270/FF/000051 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 42.644 #=GS P19711/3583-3652 AC P19711 #=GS P19711/3583-3652 OS Bovine viral diarrhea virus 1-NADL #=GS P19711/3583-3652 DE Genome polyprotein #=GS P19711/3583-3652 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; #=GS P19711/3583-3652 DR GO; GO:0003677; GO:0003723; GO:0005515; GO:0032993; GO:0033592; GO:0043489; GO:0044161; GO:1990814; GO:1990904; #=GS P19711/3583-3652 DR EC; 2.7.7.48; 3.4.21.113; 3.6.1.15; 3.6.4.13; #=GS P19712/3494-3557 AC P19712 #=GS P19712/3494-3557 OS Hog cholera virus (strain Alfort) #=GS P19712/3494-3557 DE Genome polyprotein #=GS P19712/3494-3557 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; #=GS P19712/3494-3557 DR GO; GO:0005515; #=GS P19712/3494-3557 DR EC; 2.7.7.48; 3.4.21.113; 3.6.1.15; 3.6.4.13; #=GS Q96662/3502-3569 AC Q96662 #=GS Q96662/3502-3569 OS Bovine viral diarrhea virus 1-CP7 #=GS Q96662/3502-3569 DE Genome polyprotein #=GS Q96662/3502-3569 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; #=GS Q96662/3502-3569 DR EC; 2.7.7.48; 3.4.21.113; 3.6.1.15; 3.6.4.13; #=GS Q01499/3493-3560 AC Q01499 #=GS Q01499/3493-3560 OS Bovine viral diarrhea virus 1-SD1 #=GS Q01499/3493-3560 DE Genome polyprotein #=GS Q01499/3493-3560 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; #=GS Q01499/3493-3560 DR EC; 2.7.7.48; 3.4.21.113; 3.6.1.15; 3.6.4.13; #=GS P21530/3494-3557 AC P21530 #=GS P21530/3494-3557 OS Classical swine fever virus - Brescia #=GS P21530/3494-3557 DE Genome polyprotein #=GS P21530/3494-3557 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; #=GS P21530/3494-3557 DR EC; 2.7.7.48; 3.4.21.113; 3.6.1.15; 3.6.4.13; #=GS F2X8A1/3494-3557 AC F2X8A1 #=GS F2X8A1/3494-3557 OS Classical swine fever virus #=GS F2X8A1/3494-3557 DE Genome polyprotein #=GS F2X8A1/3494-3557 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; #=GS F2X8A1/3494-3557 DR GO; GO:0005515; #=GS Q5U8X5/3494-3557 AC Q5U8X5 #=GS Q5U8X5/3494-3557 OS Classical swine fever virus #=GS Q5U8X5/3494-3557 DE Genome polyprotein #=GS Q5U8X5/3494-3557 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; #=GS Q5U8X5/3494-3557 DR GO; GO:0005515; #=GS B1PVV8/3494-3557 AC B1PVV8 #=GS B1PVV8/3494-3557 OS Classical swine fever virus #=GS B1PVV8/3494-3557 DE Genome polyprotein #=GS B1PVV8/3494-3557 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; #=GS B1PVV8/3494-3557 DR GO; GO:0005515; #=GS Q68871/3494-3557 AC Q68871 #=GS Q68871/3494-3557 OS Classical swine fever virus - Alfort/187 #=GS Q68871/3494-3557 DE Genome polyprotein #=GS Q68871/3494-3557 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; #=GS Q68871/3494-3557 DR GO; GO:0005515; #=GS Q9YS30/3494-3557 AC Q9YS30 #=GS Q9YS30/3494-3557 OS Classical swine fever virus #=GS Q9YS30/3494-3557 DE Genome polyprotein #=GS Q9YS30/3494-3557 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; #=GS Q9YS30/3494-3557 DR GO; GO:0005515; #=GS A0A1Y0DKA6/3492-3560 AC A0A1Y0DKA6 #=GS A0A1Y0DKA6/3492-3560 OS Bovine viral diarrhea virus 1 #=GS A0A1Y0DKA6/3492-3560 DE Genome polyprotein #=GS A0A1Y0DKA6/3492-3560 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; #=GS A0A1L3GV92/3493-3562 AC A0A1L3GV92 #=GS A0A1L3GV92/3493-3562 OS Bovine viral diarrhea virus 1 #=GS A0A1L3GV92/3493-3562 DE Genome polyprotein #=GS A0A1L3GV92/3493-3562 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; #=GS A0A1M4NES7/3493-3561 AC A0A1M4NES7 #=GS A0A1M4NES7/3493-3561 OS Bovine viral diarrhea virus 1 #=GS A0A1M4NES7/3493-3561 DE Genome polyprotein #=GS A0A1M4NES7/3493-3561 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; #=GS A0A0P0YJV3/3493-3561 AC A0A0P0YJV3 #=GS A0A0P0YJV3/3493-3561 OS Bovine viral diarrhea virus 1 #=GS A0A0P0YJV3/3493-3561 DE Genome polyprotein #=GS A0A0P0YJV3/3493-3561 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; #=GS A0A291HHB7/3501-3568 AC A0A291HHB7 #=GS A0A291HHB7/3501-3568 OS Bovine viral diarrhea virus 1 #=GS A0A291HHB7/3501-3568 DE Polyprotein #=GS A0A291HHB7/3501-3568 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; #=GS Q65815/3570-3637 AC Q65815 #=GS Q65815/3570-3637 OS Bovine viral diarrhea virus 1-Osloss #=GS Q65815/3570-3637 DE Genome polyprotein #=GS Q65815/3570-3637 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; #=GS A0A2C9C261/3634-3702 AC A0A2C9C261 #=GS A0A2C9C261/3634-3702 OS Bovine viral diarrhea virus 1 #=GS A0A2C9C261/3634-3702 DE Genome polyprotein #=GS A0A2C9C261/3634-3702 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; #=GS Q99BK1/3494-3557 AC Q99BK1 #=GS Q99BK1/3494-3557 OS Classical swine fever virus strain Eystrup #=GS Q99BK1/3494-3557 DE Genome polyprotein #=GS Q99BK1/3494-3557 DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; #=GF SQ 18 P19711/3583-3652 PGYEGKTPLFNIFDKVRKEWDSFNEPVAVSFDTKAWDTQVTSKDLQLIGEIQKYYYKKEWHKFIDTITDH P19712/3494-3557 PGYEGKTPLFQIFDKVKKEWDQFQNPVAVSFDTKAWDTQVTTRDLELIRDIQKFYFKKKWHKFI------ Q96662/3502-3569 PGYEGKTPLFNIFNKVRKEWDLFNEPVAVSFDTKAWDTQVTSRDLRLIGEIQKYYYRKEWHKFIDTIT-- Q01499/3493-3560 PGYEGKTPLFNIFNKVRKEWDLFNEPVAVSFDTKAWDTQVTSRDLHLIGEIQKYYYRKEWHKFIDTIT-- P21530/3494-3557 PGYEGKTPLFQIFDKVKKEWDQFQNPVAVSFDTKAWDTQVTTNDLELIKDIQKYYFKKKWHKFI------ F2X8A1/3494-3557 SGYEGKTPLFQIFDKVKKEWDQFQNPVAVSFDTKAWDTRVTTKDLELIKDIQKYYFKKKWHKFI------ Q5U8X5/3494-3557 PGYEGKTPLFQIFDKVKKEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDIQKYYFKKKWHKFI------ B1PVV8/3494-3557 PGYEGKTPLFQIFDKVKKEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDIQKYYFKKKWHKFI------ Q68871/3494-3557 PGYEGKTPLFQIFDKVKKEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDIQKYYFKKKWHKFI------ Q9YS30/3494-3557 PGYEGKTPLFQIFDKVKREWDQFQNPVAVSFDTKAWDTQVTTKDLELIMDIQKYYFKKKWHKFI------ A0A1Y0DKA6/3492-3560 PGYEGKTPLFNIFDKVRKEWDLFNEPIAVSFDTKAWDTQVTSRDLRLIGEIQKYYYKKEWHKFIDTITD- A0A1L3GV92/3493-3562 PGYEGKTPLFNIFNKVRKEWDLFNEPVAVSFDTKAWDTQVTSRDLRLIGEIQKYYYKKEWHKFIDTITDH A0A1M4NES7/3493-3561 PGYEGKTPLFNIFNKVRKEWDLFNEPVAVSFDTKAWDTQVTSRDLRLVGEIQKYYYKKEWHKFIDTITD- A0A0P0YJV3/3493-3561 PGYEGKTPLFNIFNKVRKEWGLFNEPVAVSFDTKAWDTQVTSRDLRLIGEIQKYYYRKEWHKFIDTITD- A0A291HHB7/3501-3568 PGYEGKTPLFNIFNKVRKEWDLFNEPVAVSFDTKAWDTQVTSRDLQLIGEIQKYYYRKEWHKFIDTIT-- Q65815/3570-3637 PGYEGKTPLFKIFNKVRKEWDLFNEPVAVSFDTKAWDTQVTSRDLRLIGEIQKYYYRKEWHKFIDTIT-- A0A2C9C261/3634-3702 PGYEGKTPLFNIFNKVRKEWDLFNEPVAVSFDTKAWDTQVTSRDLQLIRDIQKYYYRKEWHKFIDTITD- Q99BK1/3494-3557 PGYEGKTPLFQIFDKVKKEWDQFQNPVAVSFDTKAWDTQVTTKDLELIKDIQKYYFKKKWHKFI------ #=GC scorecons 8999999999599699789984956989999999999989966995984799989779699999222200 #=GC scorecons_70 **********_**********_*__****************_***_**_*********_*****______ #=GC scorecons_80 **********_**_**_****_*__****************__**_**__********_*****______ #=GC scorecons_90 **********_**_**_****_*__****************__**_**__*****__*_*****______ //