# STOCKHOLM 1.0 #=GF ID 3.30.70.270/FF/000044 #=GF DE Diguanylate cyclase (GGDEF)-like protein #=GF AC 3.30.70.270/FF/000044 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 92.005 #=GS Q8EBG2/256-418 AC Q8EBG2 #=GS Q8EBG2/256-418 OS Shewanella oneidensis MR-1 #=GS Q8EBG2/256-418 DE Diguanylate cyclase with GAF sensory domain #=GS Q8EBG2/256-418 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella oneidensis; #=GS Q8EBG2/256-418 DR GO; GO:0004721; GO:0006470; #=GS A0A0H2X359/180-343 AC A0A0H2X359 #=GS A0A0H2X359/180-343 OS Xanthomonas campestris pv. campestris str. 8004 #=GS A0A0H2X359/180-343 DE Uncharacterized protein #=GS A0A0H2X359/180-343 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS A0A0H2X359/180-343 DR GO; GO:0005515; #=GS Q8EF28/140-314 AC Q8EF28 #=GS Q8EF28/140-314 OS Shewanella oneidensis MR-1 #=GS Q8EF28/140-314 DE Diguanylate cyclase with PAS sensory domain #=GS Q8EF28/140-314 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella oneidensis; #=GS Q8EF28/140-314 DR GO; GO:0004721; GO:0006470; #=GS B8DYG5/384-553 AC B8DYG5 #=GS B8DYG5/384-553 OS Dictyoglomus turgidum DSM 6724 #=GS B8DYG5/384-553 DE Diguanylate cyclase with PAS/PAC sensor #=GS B8DYG5/384-553 DR ORG; Bacteria; Dictyoglomi; Dictyoglomia; Dictyoglomales; Dictyoglomaceae; Dictyoglomus; Dictyoglomus turgidum; #=GS B8E1P2/279-443 AC B8E1P2 #=GS B8E1P2/279-443 OS Dictyoglomus turgidum DSM 6724 #=GS B8E1P2/279-443 DE Diguanylate cyclase #=GS B8E1P2/279-443 DR ORG; Bacteria; Dictyoglomi; Dictyoglomia; Dictyoglomales; Dictyoglomaceae; Dictyoglomus; Dictyoglomus turgidum; #=GS Q8PDU6/180-343 AC Q8PDU6 #=GS Q8PDU6/180-343 OS Xanthomonas campestris pv. campestris str. ATCC 33913 #=GS Q8PDU6/180-343 DE Uncharacterized protein #=GS Q8PDU6/180-343 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS Q9AD78/171-333 AC Q9AD78 #=GS Q9AD78/171-333 OS Streptomyces coelicolor A3(2) #=GS Q9AD78/171-333 DE Putative membrane protein #=GS Q9AD78/171-333 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group; Streptomyces coelicolor; #=GS A5HXY9/201-354 AC A5HXY9 #=GS A5HXY9/201-354 OS Clostridium botulinum A str. Hall #=GS A5HXY9/201-354 DE Putative signaling protein #=GS A5HXY9/201-354 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; #=GS B5YGD8/242-412 AC B5YGD8 #=GS B5YGD8/242-412 OS Thermodesulfovibrio yellowstonii DSM 11347 #=GS B5YGD8/242-412 DE Sensory box/ggdef domain protein #=GS B5YGD8/242-412 DR ORG; Bacteria; Nitrospirae; Nitrospira; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio; Thermodesulfovibrio yellowstonii; #=GS A0A1D8STT1/187-349 AC A0A1D8STT1 #=GS A0A1D8STT1/187-349 OS Streptomyces olivaceus #=GS A0A1D8STT1/187-349 DE Diguanylate cyclase #=GS A0A1D8STT1/187-349 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces olivaceus; #=GS A0A2A2YSA0/188-353 AC A0A2A2YSA0 #=GS A0A2A2YSA0/188-353 OS Streptomyces sp. SA15 #=GS A0A2A2YSA0/188-353 DE Diguanylate cyclase #=GS A0A2A2YSA0/188-353 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. SA15; #=GS A0A3N4UPB2/188-353 AC A0A3N4UPB2 #=GS A0A3N4UPB2/188-353 OS Streptomyces sp. Ag82_G5-5 #=GS A0A3N4UPB2/188-353 DE Diguanylate cyclase (GGDEF)-like protein #=GS A0A3N4UPB2/188-353 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. Ag82_G5-5; #=GS A0A3R9T0Y3/171-333 AC A0A3R9T0Y3 #=GS A0A3R9T0Y3/171-333 OS Streptomyces sp. WAC08401 #=GS A0A3R9T0Y3/171-333 DE Diguanylate cyclase #=GS A0A3R9T0Y3/171-333 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. WAC08401; #=GS A0A3M0IF65/187-351 AC A0A3M0IF65 #=GS A0A3M0IF65/187-351 OS Streptomyces shenzhenensis #=GS A0A3M0IF65/187-351 DE Diguanylate cyclase #=GS A0A3M0IF65/187-351 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces shenzhenensis; #=GS A0A0F5VT39/188-351 AC A0A0F5VT39 #=GS A0A0F5VT39/188-351 OS Streptomyces sp. WM6386 #=GS A0A0F5VT39/188-351 DE Diguanylate cyclase (GGDEF) domain-containing protein #=GS A0A0F5VT39/188-351 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. WM6386; #=GS A0A3S8Y179/171-333 AC A0A3S8Y179 #=GS A0A3S8Y179/171-333 OS Streptomyces sp. KPB2 #=GS A0A3S8Y179/171-333 DE Diguanylate cyclase #=GS A0A3S8Y179/171-333 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. KPB2; #=GS A0A0N6W5A2/187-349 AC A0A0N6W5A2 #=GS A0A0N6W5A2/187-349 OS Streptomyces sp. CCM_MD2014 #=GS A0A0N6W5A2/187-349 DE Diguanylate cyclase (GGDEF) domain-containing protein #=GS A0A0N6W5A2/187-349 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. CCM_MD2014; #=GS A0A1A9C525/187-350 AC A0A1A9C525 #=GS A0A1A9C525/187-350 OS Streptomyces sp. DI166 #=GS A0A1A9C525/187-350 DE Diguanylate cyclase (GGDEF) domain-containing protein #=GS A0A1A9C525/187-350 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces sp. DI166; #=GS B0RM05/180-343 AC B0RM05 #=GS B0RM05/180-343 OS Xanthomonas campestris pv. campestris str. B100 #=GS B0RM05/180-343 DE Diguanylate cyclase #=GS B0RM05/180-343 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS A0A3E1KV92/180-343 AC A0A3E1KV92 #=GS A0A3E1KV92/180-343 OS Xanthomonas campestris pv. campestris #=GS A0A3E1KV92/180-343 DE GGDEF domain-containing protein #=GS A0A3E1KV92/180-343 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS A0A2S4JQ86/180-343 AC A0A2S4JQ86 #=GS A0A2S4JQ86/180-343 OS Xanthomonas campestris #=GS A0A2S4JQ86/180-343 DE Cyclic nucleotide-binding protein #=GS A0A2S4JQ86/180-343 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GS G0CL51/180-343 AC G0CL51 #=GS G0CL51/180-343 OS Xanthomonas campestris pv. raphani 756C #=GS G0CL51/180-343 DE Putative signal protein with GGDEF domain #=GS G0CL51/180-343 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; #=GF SQ 22 Q8EBG2/256-418 ------QITKLANFDNLTGLYNRKNFEDALQHWQP---KAHLGSFLVIIDMDNLKIINDQQGHQVGDVAIKEVAKTIL--GFWKHKGIISRFGGDEFVALCHG-PLELIENDLDAMRLKL------HHESPLNLNFSVGIAPYDN-----------DWAKSFKQADNAMYEQKRGKKQAVNALKAIVANNQL A0A0H2X359/180-343 ----------LSRTDELTGLHNRRGLALHLQECRRG--GGAPGVGLILIDCDRFKHINDEYGHLAGDRVLQNVAHALR--SVIAEGDLVCRLGGDEFCVLVAQGSIELVQHMGECIVNAVQARQASSPDGCHSCSVSVGVCSI---------DASTSYNDWYTRADTALYQAKRQGGNSLCVYEALP----- Q8EF28/140-314 --------ERLANTDELTKLYNRRAFFNL---GLSIAQQSGQALAFIMFDIDRFKHVNDRWGHTTGDAALIHIAKLTQ--AILKPVDILGRLGGEEFGILLPDLHHEQACQLAESIRCRFEEQPLALNGQIIKCTASFGIASITIPVIHSEKEAQNLLETLFNSADQAMMQAKRNGRNQVCSATELAN---- B8DYG5/384-553 RKQLEEELKKISNTDPLTGLYNRRGFITLAEHTMGLARRLKKNLILIFIDLDNMKWINDNLGHNIGDLALKETADILK--KTFRENDLIARIGGDEFVILGVVEKEEDKDEILNRLRHKVEISN-QRKDKAYKLSLSIGTVFYNP-------ESPCSIEELLQMADKMMYEEKKRKKEAG------------ B8E1P2/279-443 -----EELKILSITDPLTGLYNRRGFITLADHTLNLVKRLNKKAIILFIDLDYMKWINDNLGHNVGDQALIDVANILT--STFRQNDLIARIGGDEFVVLGIIGEENHKEKIIERLTEKVKEFN-TKEKRPYKLSLSVGYVVYDP-------ENPKTLEELLQLADQLMYEEKRLKKQNS------------ Q8PDU6/180-343 ----------LSRTDELTGLHNRRGLALHLQECRRG--GGAPGVGLILIDCDRFKHINDEYGHLAGDRVLQNVAHALR--SVIAEGDLVCRLGGDEFCVLVAQGSIELVQHMGECIVNAVQARQASSPDGCHSCSVSVGVCSI---------DASTSYNDWYTRADTALYQAKRQGGNSLCVYEALP----- Q9AD78/171-333 --------RRLAYTDALTGLANRRAVDAALDEAVERHREEDVVVSLVVCDLNGLKRVNDTHGHAVGDRLLERFGSVLSLCGAMLPGALAARLGGDEFCLLAVGPPADAVVKAAEELCRRAAE-------LELGDGVACGVASTEDPV-----GPVRSARRLFRLADAAQYRAKAERAAGP-----VVA---- A5HXY9/201-354 -----EELIHKANYDELTKIFNRRYFNEIMKNEI----KEGNK-ILVLIDIDNFKTINDIYGHSTGDFILRVFANLIK--RYLGDKDLFFRFGGDEFIVLFDDLDDKSVISFMENIRQKINK----DKIKGINIDFSYGISKLKN-------YNMTNYEDIINLADKNMYINKNKK---------------I B5YGD8/242-412 --KINKKLYKASITDSLTGIYNRRFFFQRLEEEYARTLRYGNSFCLILFDLDNLKKINDTFGHPEGDRLIKLFAKILK--TNKRKEDIAARIGGDEFGCIFIGASLEGAKKTAERIKEELKKR---YKKAPVSVSGALCCIGKGELF-----KFYKNYKDFFKELDKGLFKAKKIRDTIE-----IIE---- A0A1D8STT1/187-349 --------RRLAYTDALTGLANRRAVDAALDEAVERHRGEGVVVSLVVCDLNGLKRVNDTHGHAVGDRLLERFGSVLSLCGAMLPGALAARLGGDEFCLLAVGPAADAVVKAAEELCRRAAE-------LELGDGVACGVASTEDPV-----GPVRSARRLFRLADAAQYRAKAERSAGP-----VVA---- A0A2A2YSA0/188-353 --------RRLAFTDALTGLANRRAVDARLDRAVERHRKEGVVVSLVVCDLNGLKRVNDTHGHAVGDRLLERFGSVLSLCGAMLPGALAARLGGDEFCLLAVGPPADEVVKAADELCRRAAE-------LELGEGVACGIASTADPI-----GPVHSARRLFRLADAAQYRAKAEGSTRP-----VVAG-RE A0A3N4UPB2/188-353 --------RRLAFTDALTGLANRRAVDLRLDEAVERHRADGTVVSLVVCDLNGLKRVNDTQGHAVGDRLLERFGSVLSLCGAMLPGALAARLGGDEFCLLAVGPAADEVVEAARELCRRAAE-------LELGDGVACGVASTADPI-----GPVRSARRLFRLADAAQYRAKALHADRP-----VVAG-RE A0A3R9T0Y3/171-333 --------RRLAYTDALTGLANRRAVDAALDEAVERHRAEHVVVSLVVCDLNGLKRVNDTHGHAVGDRLLERFGSVLSLCGAMLPGALAARLGGDEFCLLAVGPPADAVVKAAEELCRRAAE-------LELGDGVACGVASTDDPV-----GPVPSARRLFRLADAAQYRAKAERAAGP-----VVA---- A0A3M0IF65/187-351 --------RQLAYTDALTGLANRRAVDMRLDEAIERHRAEGVVVSLVVCDLNGLKRVNDTCGHAVGDRLLERFGSVLSLCGAMVPGALAARLGGDEFCLLAVGPPVDDVVKAADELCRRAAE-------LELGEGVACGVASTADAI-----GPVHSARRLFRLADAAQYRAKAMRADRP-----VVAG-R- A0A0F5VT39/188-351 --------RRLAFTDALTGLANRRAVDVRLDEAVERHKREGVVVSLVVCDLNGLKRVNDTQGHAVGDRLLERFGSVLSLCGAMLPGALAARLGGDEFCLLVVGPGADEVVKAADELCRRAAE-------LELGDGVACGVASTEDPI-----GPVRSARRLFRLADAAQYQAKAEHAAKP-----VVAG--- A0A3S8Y179/171-333 --------RRLAYTDALTGLANRRAVDSALDEAVERHRAEGVVVSLVVCDLNGLKRVNDTHGHAVGDRLLERFGSVLSLCGAMLPGALAARLGGDEFCLLAVGPPADAVVKAAEELCRRAAE-------LELGDGVACGVASTEDPV-----GPVRSARRLFRLADAAQYRAKAERAAGP-----VVA---- A0A0N6W5A2/187-349 --------RRLAYTDALTGLANRRAVDSALDEAVERHRVEGVVVSLVVCDLNGLKRVNDTHGHAVGDRLLERFGSVLSLCGAMLPGALAARLGGDEFCLLAVGPPADAVVKAAEELCRRAAE-------LELGDGVACGVASTEDPV-----GPVRSARRLFRLADAAQYRAKAERAAGP-----VVA---- A0A1A9C525/187-350 --------RRLAYTDALTGLANRRAVDGRLDRAIERHRQEGVVVSLVVCDLNGLKRVNDTQGHAVGDRLLERFGSVLSLCGAMLPGALAARLGGDEFCLLAVGPPADDVVRAADELCRRAAE-------LELGDGVACGVASTGDPI-----GPVRSARRLFRLADAAQYRAKAMHATKP-----VVAG--- B0RM05/180-343 ----------LSRTDELTGLHNRRGLALHLQECRRG--GGAPGVGLILIDCDRFKHINDEYGHLAGDRVLQNVAHALR--SVIAEGDLVCRLGGDEFCVLVAQGSIELVQHMGECIVNAVQARQASSPDGCHSCSVSVGVCSI---------DASTSYNDWYTRADTALYQAKRQGGNSLCVYEALP----- A0A3E1KV92/180-343 ----------LSRTDELTGLHNRRGLALHLQECRRG--GGAPGVGLILIDCDRFKHINDEYGHLAGDRVLQNVAHALR--SVIAEGDLVCRLGGDEFCVLVAQGSIELVQHMGECIVNAVQARQASSPDGCHSCSVSVGVCSI---------DASTSYNDWYTRADTALYQAKRQGGNSLCVYEALP----- A0A2S4JQ86/180-343 ----------LSRTDELTGLHNRRGLALHLQECRRG--GGAPGVGLILIDCDRFKHINDEYGHLAGDRVLQNVAHALR--SVIAEGDLVCRLGGDEFCVLVAQGSIELVQHMGECIVNAVQARQASSPDGCHSCSVSVGVCSI---------DASTSYNDWYTRADTALYQAKRQGGNSLCVYEALP----- G0CL51/180-343 ----------LSRTDELTGLHNRRGLALHLQECRRG--GGAPGVGLILIDCDRFKHINDEYGHLAGDRVLQNVAHALR--SVIAEGDLVCRLGGDEFCVLVAQGSIELVQHMGECIVNAVQARQASSPDGCHSCSVSVGVCSI---------DASTSYNDWYTRADTALYQAKRQGGNSLCVYEALP----- #=GC scorecons 000000002266379499774998453336453333124343354765494645947994499359955744564474114443455744969989955834434363534446363454341000111334435564854542211000004433534446448946474694343333000004310000 #=GC scorecons_70 __________*__**_****_***_____________________**__*_*__*_***__**__**__*___*__*__________*__*******__*______*______*________________________*_________________________**_*_*_**___________________ #=GC scorecons_80 _____________**_****_***_____________________*___*____*__**__**__**__*______*__________*__*_*****__*______________________________________*_________________________**___*__*___________________ #=GC scorecons_90 ______________*_**___***_________________________*____*__**__**__**_______________________*_*****__*______________________________________*_________________________**______*___________________ //