# STOCKHOLM 1.0 #=GF ID 3.30.70.240/FF/000022 #=GF DE U5 snRNP-specific protein #=GF AC 3.30.70.240/FF/000022 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 74.317 #=GS P36048/853-976 AC P36048 #=GS P36048/853-976 OS Saccharomyces cerevisiae S288C #=GS P36048/853-976 DE Pre-mRNA-splicing factor SNU114 #=GS P36048/853-976 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS P36048/853-976 DR GO; GO:0000244; GO:0000349; GO:0000388; GO:0000398; GO:0003924; GO:0005515; GO:0005634; GO:0005682; GO:0030623; GO:0046540; #=GS B8C667/960-1102 AC B8C667 #=GS B8C667/960-1102 OS Thalassiosira pseudonana #=GS B8C667/960-1102 DE Uncharacterized protein #=GS B8C667/960-1102 DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; #=GS A0A1D8N5N7/804-925 AC A0A1D8N5N7 #=GS A0A1D8N5N7/804-925 OS Yarrowia lipolytica #=GS A0A1D8N5N7/804-925 DE P-loop containing nucleoside triphosphate hydrolase protein #=GS A0A1D8N5N7/804-925 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS Q757Y4/785-909 AC Q757Y4 #=GS Q757Y4/785-909 OS Eremothecium gossypii ATCC 10895 #=GS Q757Y4/785-909 DE AEL124Wp #=GS Q757Y4/785-909 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; #=GS R9XIC7/785-909 AC R9XIC7 #=GS R9XIC7/785-909 OS Saccharomycetaceae sp. 'Ashbya aceri' #=GS R9XIC7/785-909 DE AaceriAEL124Wp #=GS R9XIC7/785-909 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; #=GS J5PSD4/846-970 AC J5PSD4 #=GS J5PSD4/846-970 OS Saccharomyces kudriavzevii IFO 1802 #=GS J5PSD4/846-970 DE SNU114-like protein #=GS J5PSD4/846-970 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; #=GS H0GXB8/769-893 AC H0GXB8 #=GS H0GXB8/769-893 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GXB8/769-893 DE Snu114p #=GS H0GXB8/769-893 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS A0A0L8VM88/853-976 AC A0A0L8VM88 #=GS A0A0L8VM88/853-976 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VM88/853-976 DE SNU114p GTPase component of U5 snRNP involved in mRNA splicing via spliceosome #=GS A0A0L8VM88/853-976 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS A0A0L8RFM3/852-976 AC A0A0L8RFM3 #=GS A0A0L8RFM3/852-976 OS Saccharomyces eubayanus #=GS A0A0L8RFM3/852-976 DE SNU114-like protein #=GS A0A0L8RFM3/852-976 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; #=GS G2WHL9/853-976 AC G2WHL9 #=GS G2WHL9/853-976 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WHL9/853-976 DE K7_Snu114p #=GS G2WHL9/853-976 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS N1P2W5/853-976 AC N1P2W5 #=GS N1P2W5/853-976 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1P2W5/853-976 DE Snu114p #=GS N1P2W5/853-976 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LQT2/853-976 AC B3LQT2 #=GS B3LQT2/853-976 OS Saccharomyces cerevisiae RM11-1a #=GS B3LQT2/853-976 DE 114 kDa U5 small nuclear ribonucleoprotein component #=GS B3LQT2/853-976 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A6ZZF2/853-976 AC A6ZZF2 #=GS A6ZZF2/853-976 OS Saccharomyces cerevisiae YJM789 #=GS A6ZZF2/853-976 DE U5 snRNP-specific protein #=GS A6ZZF2/853-976 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS Q6CGB0/804-925 AC Q6CGB0 #=GS Q6CGB0/804-925 OS Yarrowia lipolytica CLIB122 #=GS Q6CGB0/804-925 DE YALI0A20768p #=GS Q6CGB0/804-925 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GF SQ 14 P36048/853-976 -AIPILLEPIYEVDITVHAPL--LPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMC-QLYFWHKIWRKVPGDVLDKDAFIPKLK---------------PAPINSLSRDFVMKTRRRKGI------------ B8C667/960-1102 ---ARLVEG--HLRLTLHSSLAGLGPLHAVLSKRRG-KVVTDAMVDGTDLIRITATIPQAESFGLAPELLKKSSGEVTAPELVFSH--WEVLNEDPF----WIPTTEEEREDYGEILMSGDLSTGLDNNALKYIRMVRSRKGLLVDASKLIVAAE A0A1D8N5N7/804-925 LAGPRLMEPIYSVHVTCPHAA--VKVVLEVLEKRRG-HLTSDTPIGGTTLYEVMGYVPVMDSFGLETDIRVATQGQALV-SLIFND--WQVVPGDPLDRSIKLPSLQ---------------AMSGTSLARDFVVKTRRHKGL------------ Q757Y4/785-909 TAVPVILEPIYEVDIVVHEVL--ASIVKNLFAKRRSARIYKIEAIVGTPLIEVKGQMPVIESVGFETDLRLATSGGAMC-QMHFWNKIWHKVPGDVMDEEAVIPKLK---------------PAPMDSLSRDFVMKTRRRKGL------------ R9XIC7/785-909 TAVPVILEPIYEVDIVVHEVL--TSIVKNLFAKRRSARIYKVEAIVGTPLIEVKGQMPVIESVGFETDLRLATSGGAMC-HMHFWNKIWHKVPGDVMDEEAVIPKLK---------------PAPMDSLSRDFVMKTRRRKGL------------ J5PSD4/846-970 TATPTLLEPIYEVDVTVHAPL--LPIVEELFKKRRGSRIYKTTKVVGTPLLEIRGQIPVIESAGFETDLRLSTNGLGMC-QLYFWNKIWRKVPGDVLDKDAFIPKLK---------------PAPVNSLSRDFVIKTRRRKGI------------ H0GXB8/769-893 TATPTLLEPIYEVDVTVHAPL--LPIVEELFKKRRGSRIYKTTKVVGTPLLEIRGQIPVIESAGFETDLRLSTNGLGMC-QLYFWNKIWRKVPGDVLDKDAFIPKLK---------------PAPVNSLSRDFVIKTRRRKGI------------ A0A0L8VM88/853-976 -AIPILLEPIYEVDITVHAPL--LPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMC-QLYFWHKIWRKVPGDVLDKDAFIPKLK---------------PAPINSLSRDFVMKTRRRKGI------------ A0A0L8RFM3/852-976 TATPTLLEPIYEVDVMVHAPL--LPIVEELFKKRRGSRLYKITKLVGTPLLEIRGQIPVIESAGFETDLRISTNGLGMC-QLYFWNKIWRKVPGDVLDKDAFIPKLK---------------PAPINSLSRDFVMKTRRRKGI------------ G2WHL9/853-976 -AIPILLEPIYEVDITVHAPL--LPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMC-QLYFWHKIWRKVPGDVLDKDAFIPKLK---------------PAPINSLSRDFVMKTRRRKGI------------ N1P2W5/853-976 -AIPILLEPIYEVDITVHAPL--LPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMC-QLYFWHKIWRKVPGDVLDKDAFIPKLK---------------PAPINSLSRDFVMKTRRRKGI------------ B3LQT2/853-976 -AIPILLEPIYEVDITVHAPL--LPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMC-QLYFWHKIWRKVPGDVLDKDAFIPKLK---------------PAPINSLSRDFVMKTRRRKGI------------ A6ZZF2/853-976 -AIPILLEPIYEVDITVHAPL--LPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLAMC-QLYFWHKIWRKVPGDVLDKDAFIPKLK---------------PAPINSLSRDFVMKTRRRKGI------------ Q6CGB0/804-925 LAGPRLMEPIYSVHVTCPHAA--VKVVLEVLEKRRG-HLTSDTPIGGTTLYEVMGYVPVMDSFGLETDIRVATQGQALV-SLIFND--WQVVPGDPLDRSIKLPSLQ---------------AMSGTSLARDFVVKTRRHKGL------------ #=GC scorecons 15273769655475664644600535735654999726644443639959467474696579496677764474934540474945339547679565334379465000000000000000555357666677466967996000000000000 #=GC scorecons_70 ___*_*_**___*__*_*__*_____*__*__****________*_**_*_**_*_***_**_*******__*_*______*_*____*__****_*_____**_*_____________________**_****_********____________ #=GC scorecons_80 _____*_*____*_____________*_____****__________**_*__*____*__**_*___*______*______*_*____*__*__*________*____________________________**___*__**_____________ #=GC scorecons_90 _______*________________________***___________**_*_______*___*_*__________*________*____*_____*________*_________________________________*__**_____________ //