# STOCKHOLM 1.0
#=GF ID 3.30.470.30/FF/000032
#=GF DE Mitochondrial DNA ligase, putative
#=GF AC 3.30.470.30/FF/000032
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 65.090
#=GS Q384Z5/12-201_272-324  AC Q384Z5
#=GS Q384Z5/12-201_272-324  OS Trypanosoma brucei brucei TREU927
#=GS Q384Z5/12-201_272-324  DE DNA ligase, putative
#=GS Q384Z5/12-201_272-324  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q384Z5/12-201_272-324  DR GO; GO:0003910; GO:0006260; GO:0006281; 
#=GS Q56AN9/186-420         AC Q56AN9
#=GS Q56AN9/186-420         OS Trypanosoma brucei
#=GS Q56AN9/186-420         DE Ligase IV-alpha
#=GS Q56AN9/186-420         DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; 
#=GS Q56AN9/186-420         DR GO; GO:0005737; GO:0005739; GO:0020023; 
#=GS Q4Q959/95-339          AC Q4Q959
#=GS Q4Q959/95-339          OS Leishmania major
#=GS Q4Q959/95-339          DE Putative DNA ligase
#=GS Q4Q959/95-339          DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4Q959/95-339          DR GO; GO:0005737; 
#=GS A4HEZ0/141-383         AC A4HEZ0
#=GS A4HEZ0/141-383         OS Leishmania braziliensis
#=GS A4HEZ0/141-383         DE Putative DNA ligase
#=GS A4HEZ0/141-383         DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS A0A1G4I2F6/186-420     AC A0A1G4I2F6
#=GS A0A1G4I2F6/186-420     OS Trypanosoma equiperdum
#=GS A0A1G4I2F6/186-420     DE Mitochondrial DNA ligase homolog, LIG k-beta
#=GS A0A1G4I2F6/186-420     DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS A0A088SC34/141-383     AC A0A088SC34
#=GS A0A088SC34/141-383     OS Leishmania panamensis
#=GS A0A088SC34/141-383     DE Mitochondrial DNA ligase, putative
#=GS A0A088SC34/141-383     DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS A4I264/95-339          AC A4I264
#=GS A4I264/95-339          OS Leishmania infantum
#=GS A4I264/95-339          DE Mitochondrial_DNA_ligase_homolog_-_putative
#=GS A4I264/95-339          DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS E9AYB4/95-337          AC E9AYB4
#=GS E9AYB4/95-337          OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AYB4/95-337          DE Putative DNA ligase (Putative mitochondrial dna ligase homolog)
#=GS E9AYB4/95-337          DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS E9BIE5/95-339          AC E9BIE5
#=GS E9BIE5/95-339          OS Leishmania donovani BPK282A1
#=GS E9BIE5/95-339          DE DNA ligase, putative
#=GS E9BIE5/95-339          DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS D6XJX8/186-420         AC D6XJX8
#=GS D6XJX8/186-420         OS Trypanosoma brucei brucei TREU927
#=GS D6XJX8/186-420         DE DNA ligase, putative
#=GS D6XJX8/186-420         DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS D6XJX8/186-420         DR GO; GO:0005737; GO:0005739; GO:0020023; 
#=GF SQ 10
Q384Z5/12-201_272-324          PFEPMALSTFDVF--ERAATAASPSGSSPQGPPYFVSPKHDGVR-IVSYVPPQAESTKSTCFSRFGRPIYGVTWIEEELRLLRWLSGDPRLVLDGELYIHRSHNPRTASSGATQTGFLAVSALVHRL--RSAKSACSSEDEVLRYVASLPIMCVFDIVSLQP--------NERVKL--------GGDK-------SGRGIPRIEKE---RL--AILRGVMEANKYVKLVPYTLITSLEEVRTVYLDKYLSTGYEGAVVRSASNVYEIREKEKKVLQ-
Q56AN9/186-420                 -ILPMLAQRWELVAEELLHPADTE-----EQESLLVSPKIDGIRCLIGYNKSQ---KKLQFFSRSGILLECCHGLVPH--AMPLFKADPSLLLDGELF-------------APHCGFERLSGLVRRLEKFTTQTTRRKQAKLLEYFA-------FDIMASDQLSSPDAPFSERYRLLKELIPHSGADRVFDTMKPNGRRNHQLEKE---EL--SSRKKIPKLYH----VPATLV-SPDEVESV-LEKACSQGYEGVIIRRPKFPYEHGKRSLGLLKY
Q4Q959/95-339                  -IQPMLAQRWELVADELIKGSNGESGTAPDKHLLLASPKIDGIRCMIGYNEKL---REVQFFSRGGIVLECCHGLVPQ--LLPLFEKDPTLMLDGELF-------------APECNFEQLNGLVRRLNKRSDTKTMEAQARLLEYFA-------FDIMYSAQLSSVSAPFNERYMLLKKLIPVCGAKRISNYVHDDTRKKVIRATHGGVATAAVANGQAAKIYH----VPAAQV-HPSDMEDV-LSEACSQGFEGVMIRLPKFPYEHGKRSFGLLKY
A4HEZ0/141-383                 -IQPMLAQRWELVVDELTKSSNGENGTTPDKHLLLASPKIDGIRCMIGYNQKL---QEVQFFSRGGIVLECCHGLVPQ--LLPLFKEDPTLMLDGELF-------------APECNFEQLNGLVRRLNKKSSPKVMEAQARLLEYFA-------FDIMYSAQLSSPSAPFDERYQLLKKLIPVCGAKRISNYIHDDAKKKVIRAKHGSVAT--AANGQAVKIYH----VPAAQV-HPSDMKDV-LDEACSQGFEGVMIRLPKFPYEHGKRSFGLLKY
A0A1G4I2F6/186-420             -ILPMLAQRWELVAEELLHPADTE-----EQESLLVSPKIDGIRCLIGYNKSQ---KKLQFFSRSGILLECCHGLVPH--AMPLFKADPSLLLDGELF-------------APHCGFERLSGLVRRLEKFTTQTTRRKQAKLLEYFA-------FDIMASDQLSSPDAPFSERYRLLKELIPHSGADRVFDTMKPNGRRNHQLEKE---EL--SSRKKIPKLYH----VPATLV-SPDEVESV-LEKACSQGYEGVIIRRPKFPYEHGKRSLGLLKY
A0A088SC34/141-383             -IQPMLAQRWELVVDELTKSSNGENGTTPDKHLLLASPKIDGIRCMIGYNQKL---QEVQFFSRGGIVLECCHGLVPQ--LLPLFKEDPTLMLDGELF-------------APECNFEQLNGLVRRLNKKSSPKVMEAQARLLEYFA-------FDIMYSAQLSSPSAPFDERYQLLKKLIPVCGAKRISNYIHDDAKKKVIRAKHGSVAT--AANGQAVKIYH----VPAAQV-HPSDMKDV-LDEACSQGFEGVMIRLPKFPYEHGKRSFGLLKY
A4I264/95-339                  -IQPMLAQRWELVADELMKSSNGESGTASDKHLLLASPKIDGIRCMIGYNEKL---REVQFFSRGGIVLECCHGLVPQ--LLPLFEKDPTLMLDGELF-------------APECNFEQLNGLVRRLNKKSDPKIMEAQARLLEYFA-------FDIMYSAQLSSVSAPFDERYMLLKKLIPVCGAKRISNYVHDDTRKKVIRATHGGVATAAAANGQAVKIYH----VPAAQV-HPSDMEDV-LNEACSQGFEGVMIRLPKFPYEHGKRSFGLLKY
E9AYB4/95-337                  -IQPMLAQRWELVVDELMNSSNGESGTAPDKHLLLASPKIDGIRCMIGYNEKL---GEVQFFSRGGIVLECCHGLAPQ--LLPLFAKDPTLMLDGELF-------------APECNFEQLNGLVRRLNRKSDPNIMEAQARLLEYFA-------FDIMYSAQLSSLSAPFDERYMLLKKLIPVCGAKRISNYVHDDTRKKVIRATHGGVAT--AENGQAVKIYH----VPAAQV-HPSDMEDV-LNEACSQGFEGVMIRLPKFPYEHGKRSFGLLKY
E9BIE5/95-339                  -IQPMLAQRWELVADELMKSSNGESGTASDKHLLLASPKIDGIRCMIGYNEKL---REVQFFSRGGIVLECCHGLVPQ--LLPLFEKDPTLMLDGELF-------------APECNFEQLNGLVRRLNKKSDPKIMEAQARLLEYFA-------FDIMYSAQLSSVSAPFDERYMLLKKLIPVCGAKRISNYVHDDTRKKVIRATHGGVATAAAANGQAVKIYH----VPAAQV-HPSDMEDV-LNEACSQGFEGVMIRLPKFPYEHGKRSFGLLKY
D6XJX8/186-420                 -ILPMLAQRWELVAEELLHPADTE-----EQESLLVSPKIDGIRCLIGYNKSQ---KKLQFFSRSGILLECCHGLVPH--AMPLFKADPSLLLDGELF-------------APHCGFERLSGLVRRLEKFTTQTTRRKQAKLLEYFA-------FDIMASDQLSSPDAPFSERYRLLKELIPHSGADRVFDTMKPNGRRNHQLEKE---EL--SSRKKIPKLYH----VPATLV-SPDEVESV-LEKACSQGYEGVIIRRPKFPYEHGKRSLGLLKY
#=GC scorecons                 0649966666766349544454452322254446659995997955769534400045466999395465656565550056656439949599999700000000000009656595465699699343644443446656969690000000999635465553355549954955355523965742323325575433355511145005434454646600009956470564665490955559697996579366569956676366965
#=GC scorecons_70              _*_**_____***__*__________________*_***_****__***___________****_*__*_____*______*__*__**_*_******_____________**___*__*_******___*_______*__******_______****___*_________**__*________**_*_________*______________________*__*____**___*__*_*___*_*____*_*****_**_*___**_***___***_
#=GC scorecons_80              ___**_____*____*____________________***_****__*_*____________***_*_____________________**_*_******_____________*____*_____**_**_______________*_*_*_______***______________**__*________*__*_________*______________________________**___*________*_*____*_****__**_____**___*____*__
#=GC scorecons_90              ___**__________*____________________***_**_*____*____________***_*_____________________**_*_*****______________*____*_____**_**_______________*_*_*_______***______________**__*________*___________________________________________**____________*_*____*_*_**___*_____**________*__
//