# STOCKHOLM 1.0
#=GF ID 3.30.470.30/FF/000024
#=GF DE ATP-dependent DNA ligase
#=GF AC 3.30.470.30/FF/000024
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 89.390
#=GS Q89VA3/274-483      AC Q89VA3
#=GS Q89VA3/274-483      OS Bradyrhizobium diazoefficiens USDA 110
#=GS Q89VA3/274-483      DE Bll1144 protein
#=GS Q89VA3/274-483      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; 
#=GS Q8PB36/207-408      AC Q8PB36
#=GS Q8PB36/207-408      OS Xanthomonas campestris pv. campestris str. ATCC 33913
#=GS Q8PB36/207-408      DE DNA ligase
#=GS Q8PB36/207-408      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GS Q7UX47/222-423      AC Q7UX47
#=GS Q7UX47/222-423      OS Rhodopirellula baltica SH 1
#=GS Q7UX47/222-423      DE Thermostable DNA ligase
#=GS Q7UX47/222-423      DR ORG; Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula; Rhodopirellula baltica; 
#=GS F6UX10/253-466      AC F6UX10
#=GS F6UX10/253-466      OS Ciona intestinalis
#=GS F6UX10/253-466      DE Uncharacterized protein
#=GS F6UX10/253-466      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS A0E0N6/276-488      AC A0E0N6
#=GS A0E0N6/276-488      OS Paramecium tetraurelia
#=GS A0E0N6/276-488      DE DNA ligase
#=GS A0E0N6/276-488      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS A0A1L3F3H3/239-448  AC A0A1L3F3H3
#=GS A0A1L3F3H3/239-448  OS Bradyrhizobium japonicum
#=GS A0A1L3F3H3/239-448  DE ATP-dependent DNA ligase
#=GS A0A1L3F3H3/239-448  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium japonicum; 
#=GS A0A1I3WWT2/274-483  AC A0A1I3WWT2
#=GS A0A1I3WWT2/274-483  OS Bradyrhizobium sp. Gha
#=GS A0A1I3WWT2/274-483  DE DNA ligase-1
#=GS A0A1I3WWT2/274-483  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. Gha; 
#=GS H5YCD7/274-483      AC H5YCD7
#=GS H5YCD7/274-483      OS Bradyrhizobium sp. WSM471
#=GS H5YCD7/274-483      DE ATP-dependent DNA ligase
#=GS H5YCD7/274-483      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. WSM471; 
#=GS A0A2A6N5B1/274-483  AC A0A2A6N5B1
#=GS A0A2A6N5B1/274-483  OS Bradyrhizobium diazoefficiens
#=GS A0A2A6N5B1/274-483  DE ATP-dependent DNA ligase
#=GS A0A2A6N5B1/274-483  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; 
#=GS A0A176YR77/294-503  AC A0A176YR77
#=GS A0A176YR77/294-503  OS 
#=GS A0A176YR77/294-503  DE ATP-dependent DNA ligase
#=GS A0A176YR77/294-503  DR ORG; 
#=GS G7DPB2/202-411      AC G7DPB2
#=GS G7DPB2/202-411      OS Bradyrhizobium japonicum USDA 6
#=GS G7DPB2/202-411      DE ATP-dependent DNA ligase
#=GS G7DPB2/202-411      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium japonicum; 
#=GS A0A3E1L0P3/207-408  AC A0A3E1L0P3
#=GS A0A3E1L0P3/207-408  OS Xanthomonas campestris pv. campestris
#=GS A0A3E1L0P3/207-408  DE ATP-dependent DNA ligase
#=GS A0A3E1L0P3/207-408  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GS A0A0H2X996/207-408  AC A0A0H2X996
#=GS A0A0H2X996/207-408  OS Xanthomonas campestris pv. campestris str. 8004
#=GS A0A0H2X996/207-408  DE DNA ligase
#=GS A0A0H2X996/207-408  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GS B0RX10/207-408      AC B0RX10
#=GS B0RX10/207-408      OS Xanthomonas campestris pv. campestris str. B100
#=GS B0RX10/207-408      DE ATP-dependent DNA ligase, probable
#=GS B0RX10/207-408      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas; Xanthomonas campestris; 
#=GF SQ 14
Q89VA3/274-483              ----PFRPVMLAHAIDDTDFVAL-DPADYIAEWKWDGIRVQAVAGRDDRGHVTARLYSRTGEDITGSFPDL-VPSLRLP--------------GAIDGELLILR---------EGRV--QSFNVLQQRLNRKAVSPKLI--KEFPIHLRAYDLLGD-----DENDLRELPFTERRERLETFITKLGDPRIDLSPIVPFASWEALTAARADPASAGAGEDADAVEGVMLKRRDAPYLPGRPKGQ-WWKWK--
Q8PB36/207-408              ----PY-PFFLASPLE-ADVESLGAIDDWLLEWKWDGIRLQLLRRAG-----EAALWSRGEERLDGRFPEIEQAAMGLP------------DGTVIDGELLAWQ---------PEQLLPMPFTALQTRIQRLKPGPKTL--AAAPARVVAYDLLEL-----DGEDLRERPLHARRALLERVLATLADPRIIASPLVHSTDWQAAAQVRLDARARGV-------EGLMLKRARSPYQSGRRRGD-WWKWK--
Q7UX47/222-423              ---------------DGPDWQTLGDPSEYQAEWKWDGIRGQVIRRAG-----RTYIWSRGEDLMVNRWPEIERAAEFLP------------DGTVIDGEILASRHVSPALDDSKQAIEVLPFAQLQRRIGRKTVGKKLL--TEVPVMFHAFDCLEL-----DGNDLRAKPLGDRRDALLKMLSIHQPPSVVWNEPLSFDSWDDLAAIRSTSRHALA-------EGVMIKRLDAPYSVGRVRGV-WWKWK--
F6UX10/253-466              QLFQPFRPMLALNANI-TEVEKLLGNQPFKIEIKYDGERSQLHKEGN-----RYKYFSRSGREYSTVFGETPYTGTLTPFIYGCFHESV--SSCILDGEMMGFD---------PQ-------LNIFMQKGGKFDIKHITEDSELQPCFVVFDILLL-----NQERLTSKPQSERFKLFNKLIQPLEG-RMHLTEAKEASSNQEVMSSLNDAIDRRE-------EGIIVKNPNAKYFPNKRKGSGWFKIKPE
A0E0N6/276-488              RIFHAIKPMLAAKKSP-EEIRKLIEGKELLVETKFDGERIQCHFTPE-----VIRFFTRNSNDYTYLYKDK---------LGDIVRQSVQAQCAILDGEIIVVN---------KET-----GDNVRFGLNKTVALSKDVNDDAFGLCYKIFDILYLKTYQGQEVNTMSAPLSTRRSLLQRIIVPIPN-QLEVVQAATIKSFEELIQQFDMAIERNQ-------EGIIIKQMDSQYLPNERSTK-WVKMKGD
A0A1L3F3H3/239-448          ----PFRPVMLAHAIEDTDFAAL-DPADYIAEWKWDGIRVQAVAGRDDRGQITARLYSRTGEDITGSFPDL-VPSLRLA--------------GAIDGELLILR---------EGRV--QSFNVLQQRLNRKVVSPKLI--KEFPIHLRAYDLLGD-----DENDLRELPFAERRERLETFIGKLDDPRIDLSPTVPFASWQALTAARADPASAGAGEDADAVEGVMLKRRDAPYLPGRPKGQ-WWKWK--
A0A1I3WWT2/274-483          ----PFRPVMLAHAIEDSDFASL-DPADYVAEWKWDGIRVQAVAGRDGHGQITARLYSRTGEDITGSFPDL-VPSLRLP--------------GAIDGELLILR---------EGRV--QSFNVLQQRLNRKVVSPKLI--KEFPIHLRAYDLLGD-----DENDLRELPFAERRERLEAFIGKLGDPRIDLSPTVPFSSWEALTAARADPAGAGAGEDADAVEGVMLKRRDAAYLPGRPKGQ-WWKWK--
H5YCD7/274-483              ----PFRPVMLAHAIEDTDFAAL-DPADYIAEWKWDGIRVQAVAGRDEHGRITARLYSRTGEDITGSFPDL-VPSLRLP--------------GAIDGELLILR---------EGRV--QSFNVLQQRLNRKVVSPKLI--KEFPIHLRAYDLLGD-----DENDLRELPFAERRERLETFIGKLDDPRIDLSPTVAFASWEALTAARADPASAGAGEDADAVEGVMLKRRDAPYLPGRPKGQ-WWKWK--
A0A2A6N5B1/274-483          ----PFRPVMLAHAIDDTDFVAL-DPADYIAEWKWDGIRVQAVAGRDDRGHVTARLYSRTGEDITGSFPDL-VPSLRLP--------------GAIDGELLILR---------EGRV--QSFNVLQQRLNRKAVSPKLI--KEFPIHLRAYDLLGD-----DENDLRELPFTERRERLETFITKLGDPRIDLSPIVPFASWEALTAARADPASAGAGEDADAVEGVMLKRRDAPYLPGRPKGQ-WWKWK--
A0A176YR77/294-503          ----PFRPVMLAHAIEGTDFATL-DPADYIAEWKWDGIRVQAVAGRDDRGHITARLYSRTGEDITGSFPDL-VPALRLP--------------GAIDGELLILR---------DGRV--QSFNVLQQRLNRKVVSPKLI--KDFPIHLRAYDLLGD-----DENDLRELPFAERRERLETFVRKLDDPRIDLSPTVPFASWEALTAARADPVSAGAGEDAAAVEGVMLKRRDAPYLPGRPKGQ-WWKWK--
G7DPB2/202-411              ----PFRPVMLAHAIEDTDFAAL-DPADYVAEWKWDGIRVQAVAGRDERGQITARLYSRTGEDITGSFPDL-VPSLRLA--------------GAIDGELLILR---------EGRV--QSFNVLQQRLNRKVVSPKLI--KEFPIHLRAYDLLGD-----DANDLRELPFAERRERLETFIGKLDDPRIDLSPTVPFASWQALTAARADPASAGAGADADAVEGVMLKRRDAPYLPGRPKGQ-WWKWK--
A0A3E1L0P3/207-408          ----PY-PFFLASPLE-ADVESLGAIDDWLLEWKWDGIRLQLLRRAG-----EAALWSRGEERLDGRFPEIEQAAMGLP------------DGTVIDGELLAWQ---------PEQLLPMPFTALQTRIQRLKPGPKTL--AAAPARVVAYDLLEL-----DGEDLRERPLHARRALLERVLATLADPRIIASPLVHSTDWQAAAQVRLDARARGV-------EGLMLKRARSPYQSGRRRGD-WWKWK--
A0A0H2X996/207-408          ----PY-PFFLASPLE-ADVESLGAIDDWLLEWKWDGIRLQLLRRAG-----EAALWSRGEERLDGRFPEIEQAAMGLP------------DGTVIDGELLAWQ---------PEQLLPMPFTALQTRIQRLKPGPKTL--AAAPARVVAYDLLEL-----DGEDLRERPLHARRALLERVLATLADPRIIASPLVHSTDWQAAAQVRLDARARGV-------EGLMLKRARSPYQSGRRRGD-WWKWK--
B0RX10/207-408              ----PY-PFFLASPLE-ADVESLGAIDDWLLEWKWDGIRLQLLRRAG-----EAALWSRGEERLDGRFPEIEQAAMGLP------------DGTVIDGELLAWQ---------PEQLLPMPFTALQTRIQRLKPGPKTL--AAAPARVVAYDLLEL-----DGEDLRERPLHARRALLERVLATLADPRIIASPLVHSTDWQAAAQVRLDARARGV-------EGLMLKRARSPYQSGRRRGD-WWKWK--
#=GC scorecons              00006527445534341474349143464449596995949444445001003545579456444537674124432550000000000001145799967435000000000453300235447636546434457450045464444679593400000655676539534974475446336355663455453446555554453654355410110119967696356594566467309595900
#=GC scorecons_70           _______*__________*___*________*_****_*_*________________**________*_*_________________________******_______________________*__*__*_____*_______*____***_*_______*__**___*___**__*___*__*___**_________*_______________________**_****____*__**__*__*_*_*__
#=GC scorecons_80           _______*__________*___*________*_*_**_*_*________________**_____________________________________***_____________________________________*_____________**_*___________*___*___*___*_____________________________________________**_*_*_____*______*__*_*_*__
#=GC scorecons_90           ______________________*________*_*_**_*_*_________________*_____________________________________***____________________________________________________*_*_______________*___*_________________________________________________**___*_____*_________*_*_*__
//