# STOCKHOLM 1.0
#=GF ID 3.30.470.20/FF/000065
#=GF DE Carbamoyl-phosphate synthase, large subunit
#=GF AC 3.30.470.20/FF/000065
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 36.673
#=GS D0NFC4/1065-1087_1157-1330      AC D0NFC4
#=GS D0NFC4/1065-1087_1157-1330      OS Phytophthora infestans T30-4
#=GS D0NFC4/1065-1087_1157-1330      DE CAD protein
#=GS D0NFC4/1065-1087_1157-1330      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS D0NFC5/1121-1143_1213-1386      AC D0NFC5
#=GS D0NFC5/1121-1143_1213-1386      OS Phytophthora infestans T30-4
#=GS D0NFC5/1121-1143_1213-1386      DE Carbamoyl-phosphate synthase [ammonia], putative
#=GS D0NFC5/1121-1143_1213-1386      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS B8C8T5/1110-1132_1203-1376      AC B8C8T5
#=GS B8C8T5/1110-1132_1203-1376      OS Thalassiosira pseudonana
#=GS B8C8T5/1110-1132_1203-1376      DE Uncharacterized protein
#=GS B8C8T5/1110-1132_1203-1376      DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS F0WYW1/1089-1111_1181-1354      AC F0WYW1
#=GS F0WYW1/1089-1111_1181-1354      OS Albugo laibachii Nc14
#=GS F0WYW1/1089-1111_1181-1354      DE Uncharacterized protein ALNC14_128180
#=GS F0WYW1/1089-1111_1181-1354      DR ORG; Eukaryota; Oomycetes; Albuginales; Albuginaceae; Albugo; Albugo laibachii; 
#=GS K3WPG9/765-787_857-1030         AC K3WPG9
#=GS K3WPG9/765-787_857-1030         OS Globisporangium ultimum DAOM BR144
#=GS K3WPG9/765-787_857-1030         DE Uncharacterized protein
#=GS K3WPG9/765-787_857-1030         DR ORG; Eukaryota; Oomycetes; Pythiales; Pythiaceae; Globisporangium; Globisporangium ultimum; 
#=GS A0A0P1AIV8/1065-1087_1157-1330  AC A0A0P1AIV8
#=GS A0A0P1AIV8/1065-1087_1157-1330  OS Plasmopara halstedii
#=GS A0A0P1AIV8/1065-1087_1157-1330  DE Carbamoyl-phosphate large partial
#=GS A0A0P1AIV8/1065-1087_1157-1330  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Plasmopara; Plasmopara halstedii; 
#=GS W2XIB6/950-972_1042-1215        AC W2XIB6
#=GS W2XIB6/950-972_1042-1215        OS Phytophthora parasitica CJ01A1
#=GS W2XIB6/950-972_1042-1215        DE Carbamoyl-phosphate synthase, large subunit
#=GS W2XIB6/950-972_1042-1215        DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A024GBK7/1079-1101_1171-1344  AC A0A024GBK7
#=GS A0A024GBK7/1079-1101_1171-1344  OS Albugo candida
#=GS A0A024GBK7/1079-1101_1171-1344  DE Uncharacterized protein
#=GS A0A024GBK7/1079-1101_1171-1344  DR ORG; Eukaryota; Oomycetes; Albuginales; Albuginaceae; Albugo; Albugo candida; 
#=GS A0A0W8DI62/1137-1159_1229-1402  AC A0A0W8DI62
#=GS A0A0W8DI62/1137-1159_1229-1402  OS Phytophthora nicotianae
#=GS A0A0W8DI62/1137-1159_1229-1402  DE Uncharacterized protein
#=GS A0A0W8DI62/1137-1159_1229-1402  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS H3GA51/1062-1084_1154-1327      AC H3GA51
#=GS H3GA51/1062-1084_1154-1327      OS Phytophthora ramorum
#=GS H3GA51/1062-1084_1154-1327      DE Uncharacterized protein
#=GS H3GA51/1062-1084_1154-1327      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS G4ZAQ2/1064-1086_1156-1329      AC G4ZAQ2
#=GS G4ZAQ2/1064-1086_1156-1329      OS Phytophthora sojae strain P6497
#=GS G4ZAQ2/1064-1086_1156-1329      DE Uncharacterized protein
#=GS G4ZAQ2/1064-1086_1156-1329      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora sojae; 
#=GS A0A329RYG1/1065-1087_1157-1330  AC A0A329RYG1
#=GS A0A329RYG1/1065-1087_1157-1330  OS Phytophthora cactorum
#=GS A0A329RYG1/1065-1087_1157-1330  DE Uncharacterized protein
#=GS A0A329RYG1/1065-1087_1157-1330  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS A0A225VPJ5/1090-1112_1182-1355  AC A0A225VPJ5
#=GS A0A225VPJ5/1090-1112_1182-1355  OS Phytophthora megakarya
#=GS A0A225VPJ5/1090-1112_1182-1355  DE Carbamoyl-phosphate synthase
#=GS A0A225VPJ5/1090-1112_1182-1355  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora megakarya; 
#=GS A0A3R7JZF2/1039-1061_1131-1304  AC A0A3R7JZF2
#=GS A0A3R7JZF2/1039-1061_1131-1304  OS Phytophthora kernoviae
#=GS A0A3R7JZF2/1039-1061_1131-1304  DE Uncharacterized protein
#=GS A0A3R7JZF2/1039-1061_1131-1304  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora kernoviae; 
#=GS K0TB25/976-998_1069-1241        AC K0TB25
#=GS K0TB25/976-998_1069-1241        OS Thalassiosira oceanica
#=GS K0TB25/976-998_1069-1241        DE Uncharacterized protein
#=GS K0TB25/976-998_1069-1241        DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira oceanica; 
#=GS A0A081AQJ2/1069-1091_1161-1334  AC A0A081AQJ2
#=GS A0A081AQJ2/1069-1091_1161-1334  OS Phytophthora parasitica P1976
#=GS A0A081AQJ2/1069-1091_1161-1334  DE Carbamoyl-phosphate synthase, large subunit
#=GS A0A081AQJ2/1069-1091_1161-1334  DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2QII2/1069-1091_1161-1334      AC W2QII2
#=GS W2QII2/1069-1091_1161-1334      OS Phytophthora parasitica INRA-310
#=GS W2QII2/1069-1091_1161-1334      DE Carbamoyl-phosphate synthase, large subunit
#=GS W2QII2/1069-1091_1161-1334      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2NU14/504-526_596-769          AC W2NU14
#=GS W2NU14/504-526_596-769          OS Phytophthora parasitica
#=GS W2NU14/504-526_596-769          DE Carbamoyl-phosphate synthase, large subunit
#=GS W2NU14/504-526_596-769          DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2NU39/508-530_600-773          AC W2NU39
#=GS W2NU39/508-530_600-773          OS Phytophthora parasitica
#=GS W2NU39/508-530_600-773          DE Carbamoyl-phosphate synthase, large subunit
#=GS W2NU39/508-530_600-773          DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8CC07/154-175_245-418      AC A0A0W8CC07
#=GS A0A0W8CC07/154-175_245-418      OS Phytophthora nicotianae
#=GS A0A0W8CC07/154-175_245-418      DE PYR1-3 protein
#=GS A0A0W8CC07/154-175_245-418      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS A0A0W8CD93/119-141_211-384      AC A0A0W8CD93
#=GS A0A0W8CD93/119-141_211-384      OS Phytophthora nicotianae
#=GS A0A0W8CD93/119-141_211-384      DE Uncharacterized protein
#=GS A0A0W8CD93/119-141_211-384      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS A0A081AQL4/45-67_137-310        AC A0A081AQL4
#=GS A0A081AQL4/45-67_137-310        OS Phytophthora parasitica P1976
#=GS A0A081AQL4/45-67_137-310        DE Uncharacterized protein
#=GS A0A081AQL4/45-67_137-310        DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS V9FNS4/808-830_900-1073         AC V9FNS4
#=GS V9FNS4/808-830_900-1073         OS Phytophthora parasitica P1569
#=GS V9FNS4/808-830_900-1073         DE Carbamoyl-phosphate synthase, large subunit
#=GS V9FNS4/808-830_900-1073         DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8DR01/12-35_105-278        AC A0A0W8DR01
#=GS A0A0W8DR01/12-35_105-278        OS Phytophthora nicotianae
#=GS A0A0W8DR01/12-35_105-278        DE URA2 protein
#=GS A0A0W8DR01/12-35_105-278        DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GF SQ 24
D0NFC4/1065-1087_1157-1330              -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARDNDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
D0NFC5/1121-1143_1213-1386              -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARDNDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
B8C8T5/1110-1132_1203-1376              -TSARDIDRAEDRHQFSDMLDDMGLGAKEIEFDAVANEGKILNYAIGEHLENAGVHSGDATVILPAQKLYVGTIRQIKKYATAIAKALNITGPFNIQFMAIGNDVQVIECNLRASRTFPFVSKTFHRNFISLATRAMCGLHVTPYNISLLDIDYVCVKAPMFSFTRLRGADPTLGVEMASTGEVACFGDDAQEAFLQA
F0WYW1/1089-1111_1181-1354              -TSADSIDHCEDRNRFSALLDSLGLNAKEVEFDGVAQDGAILNYAISEHVENAGVHSGDATLVLPAQKLYVQTIKQVKRIASAIASVLDISGPFNIQLMARDNDVKVIECNLRASRTFPFISKTFDMNFINLATKAMLGLPVKSVPIALVDIDYVGVKAPQFSFTRLHGADPMLGVEMASTGEVACFGTDMHEAYLKA
K3WPG9/765-787_857-1030                 -THPENIDRCEDRNRFSALLDTLGLNAKEVEFDGVAKDGAIINYAISEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAIALNITGPFNIQLMARDNDVKVIECNLRASRTFPFISKTFDLNFINLATKAMLGLPVKSVPIALTDIDYVGVKAPQFSFTRLHGADPTLGVEMASTGEVACFGTDMHEAYLKA
A0A0P1AIV8/1065-1087_1157-1330          -TSPESIDQCENRNKFSALLDTLGLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALNITGPFNIQLMARDNDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
W2XIB6/950-972_1042-1215                -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
A0A024GBK7/1079-1101_1171-1344          -TSADSIDHCEDRNRFSALLDSLGLNAKEVEFDGVAQDGAILNYAISEHVENAGVHSGDATLVLPAQKLYVQTIKQVKRIASAIASVLNISGPFNIQLMARDNDVKVIECNLRASRTFPFISKTFDMNFINLATKAMLGLPVKSVPIALVDIDYVGVKAPQFSFTRLHGADPMLGVEMASTGEVACFGTDMHEAYLKA
A0A0W8DI62/1137-1159_1229-1402          -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
H3GA51/1062-1084_1154-1327              -TSPESIDQCEDRNKFSALLDTLGLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIASALNITGPFNIQLMAKANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
G4ZAQ2/1064-1086_1156-1329              -TAPESIDQCEDRNKFSALLDTLGLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIASALNITGPFNIQLMARDNDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
A0A329RYG1/1065-1087_1157-1330          -TSPESIDQCEDRNKFSALLDTLGLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
A0A225VPJ5/1090-1112_1182-1355          -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAAALNITGPFNIQLMARDNDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
A0A3R7JZF2/1039-1061_1131-1304          -TDPESIDQCEDRNKFSALLDTLGLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIASALKITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
K0TB25/976-998_1069-1241                -TAARDIERAEDRQQFSDMLDDMGLGAKEIEFDGVASGGKILNYAIGEHLENAGVHSGDATVILPAQKLYVGTIRQIKKYGAAIAKALNITGPFNIQFMATGNDVMVIECNLRASRTFPFVSKTLHANFISLATRAMCGLPVTPYRISLLDIDYCCVKAPMFSFTRLRGADPTLGVEMSSTGEVACFGDDPYEAFLQ-
A0A081AQJ2/1069-1091_1161-1334          -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
W2QII2/1069-1091_1161-1334              -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
W2NU14/504-526_596-769                  -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
W2NU39/508-530_600-773                  -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
A0A0W8CC07/154-175_245-418              --SPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
A0A0W8CD93/119-141_211-384              -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
A0A081AQL4/45-67_137-310                -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
V9FNS4/808-830_900-1073                 -TSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
A0A0W8DR01/12-35_105-278                GTSPESIDQCEDRNKFSALLDTLNLNAKEIEFDGVAKDGAILNYAMSEHVENAGVHSGDATLVLPAQKLYVGTIKQVKRIASAIAQALDITGPFNIQLMARANDVKVIECNLRASRTFPFISKTFDLNFINLATKAMIGLPVKSVPIALIDIDYVGVKAPQFSFTRLHGADPSLGVEMASTGEVACFGTDMHEAYLKA
#=GC scorecons                          086655976598966995699566969997999799569598999669969999999999967999999997997979757699947969799999969954999599999999999999799976499969997994997956559695999965999959999996999959999979999999995956997966
#=GC scorecons_70                       _*____**__***__**_***_*_*_**********_**_***************************************_*_***_**_***********__***_*******************__**********_****_*__***_*****_****_***********_***************_*_******_
#=GC scorecons_80                       _*____**__***__**__**___*_**********__*_*****__**_***********_*****************_*_***_**_********_**__***_*******************__***_******_****____*_*_****__****_******_****_***************_*__****__
#=GC scorecons_90                       _*____*___***__**__**___*_***_***_**__*_*****__**_***********__********_**_*_*____***__*_*_******_**__***_**************_***___***_***_**_**_*____*_*_****__****_******_****_*****_*********_*__**_*__
//