# STOCKHOLM 1.0
#=GF ID 3.30.420.390/FF/000004
#=GF DE DNA polymerase subunit gamma-1, mitochondrial
#=GF AC 3.30.420.390/FF/000004
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 94.872
#=GS Q27607/312-404      AC Q27607
#=GS Q27607/312-404      OS Drosophila melanogaster
#=GS Q27607/312-404      DE DNA polymerase subunit gamma-1, mitochondrial
#=GS Q27607/312-404      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q27607/312-404      DR GO; GO:0003887; GO:0005515; GO:0005739; GO:0005760; GO:0006261; GO:0006264; GO:0007562; GO:0008340; GO:0019896; 
#=GS Q27607/312-404      DR EC; 2.7.7.7; 
#=GS E9HXB5/551-649      AC E9HXB5
#=GS E9HXB5/551-649      OS Daphnia pulex
#=GS E9HXB5/551-649      DE Uncharacterized protein
#=GS E9HXB5/551-649      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS A0A0D1CMM9/489-585  AC A0A0D1CMM9
#=GS A0A0D1CMM9/489-585  OS Ustilago maydis 521
#=GS A0A0D1CMM9/489-585  DE Uncharacterized protein
#=GS A0A0D1CMM9/489-585  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago maydis; 
#=GS A9UXT9/188-289      AC A9UXT9
#=GS A9UXT9/188-289      OS Monosiga brevicollis
#=GS A9UXT9/188-289      DE Predicted protein
#=GS A9UXT9/188-289      DR ORG; Eukaryota; Choanoflagellida; Salpingoecidae; Monosiga; Monosiga brevicollis; 
#=GS A8XZ80/26-137       AC A8XZ80
#=GS A8XZ80/26-137       OS Caenorhabditis briggsae
#=GS A8XZ80/26-137       DE Protein CBG21034
#=GS A8XZ80/26-137       DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS F4PEI2/278-379      AC F4PEI2
#=GS F4PEI2/278-379      OS Batrachochytrium dendrobatidis JAM81
#=GS F4PEI2/278-379      DE Uncharacterized protein
#=GS F4PEI2/278-379      DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS A0A0F7S003/488-584  AC A0A0F7S003
#=GS A0A0F7S003/488-584  OS Sporisorium scitamineum
#=GS A0A0F7S003/488-584  DE Uncharacterized protein
#=GS A0A0F7S003/488-584  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; 
#=GS R9PNG7/479-576      AC R9PNG7
#=GS R9PNG7/479-576      OS Pseudozyma hubeiensis SY62
#=GS R9PNG7/479-576      DE DNA polymerase gamma
#=GS R9PNG7/479-576      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Pseudozyma; Pseudozyma hubeiensis; 
#=GS A0A077QWW3/481-577  AC A0A077QWW3
#=GS A0A077QWW3/481-577  OS Melanopsichium pennsylvanicum 4
#=GS A0A077QWW3/481-577  DE Related to MIP1-DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial
#=GS A0A077QWW3/481-577  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Melanopsichium; Melanopsichium pennsylvanicum; 
#=GS I2FPZ7/485-583      AC I2FPZ7
#=GS I2FPZ7/485-583      OS Ustilago hordei Uh4857-4
#=GS I2FPZ7/485-583      DE Related to MIP1-DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial
#=GS I2FPZ7/485-583      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago; Ustilago hordei; 
#=GS E6ZN15/477-573      AC E6ZN15
#=GS E6ZN15/477-573      OS Sporisorium reilianum SRZ2
#=GS E6ZN15/477-573      DE Related to MIP1-DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial
#=GS E6ZN15/477-573      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GS A0A177X140/367-468  AC A0A177X140
#=GS A0A177X140/367-468  OS Batrachochytrium dendrobatidis JEL423
#=GS A0A177X140/367-468  DE DNA polymerase family A
#=GS A0A177X140/367-468  DR ORG; Eukaryota; Fungi; Chytridiomycota; Chytridiomycetes; Rhizophydiales; Batrachochytrium; Batrachochytrium dendrobatidis; 
#=GS A0A2N8UH24/476-572  AC A0A2N8UH24
#=GS A0A2N8UH24/476-572  OS Sporisorium reilianum f. sp. reilianum
#=GS A0A2N8UH24/476-572  DE Related to MIP1-DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial
#=GS A0A2N8UH24/476-572  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium reilianum; 
#=GS A0A127ZH83/488-584  AC A0A127ZH83
#=GS A0A127ZH83/488-584  OS Sporisorium scitamineum
#=GS A0A127ZH83/488-584  DE Related to MIP1-DNA-directed DNA polymerase gamma catalytic subunit, mitochondrial
#=GS A0A127ZH83/488-584  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Sporisorium; Sporisorium scitamineum; 
#=GS B4HXA2/313-404      AC B4HXA2
#=GS B4HXA2/313-404      OS Drosophila sechellia
#=GS B4HXA2/313-404      DE GM15104
#=GS B4HXA2/313-404      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A0J9TMZ7/313-404  AC A0A0J9TMZ7
#=GS A0A0J9TMZ7/313-404  OS Drosophila simulans
#=GS A0A0J9TMZ7/313-404  DE Uncharacterized protein
#=GS A0A0J9TMZ7/313-404  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS A0A1W4UUS9/312-403  AC A0A1W4UUS9
#=GS A0A1W4UUS9/312-403  OS Drosophila ficusphila
#=GS A0A1W4UUS9/312-403  DE DNA polymerase subunit gamma-1, mitochondrial
#=GS A0A1W4UUS9/312-403  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B3MN26/310-401      AC B3MN26
#=GS B3MN26/310-401      OS Drosophila ananassae
#=GS B3MN26/310-401      DE Uncharacterized protein, isoform C
#=GS B3MN26/310-401      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS A0A0N8NZ99/243-334  AC A0A0N8NZ99
#=GS A0A0N8NZ99/243-334  OS Drosophila ananassae
#=GS A0A0N8NZ99/243-334  DE Uncharacterized protein, isoform B
#=GS A0A0N8NZ99/243-334  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B3NAD1/313-404      AC B3NAD1
#=GS B3NAD1/313-404      OS Drosophila erecta
#=GS B3NAD1/313-404      DE Uncharacterized protein
#=GS B3NAD1/313-404      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4P3Q5/313-404      AC B4P3Q5
#=GS B4P3Q5/313-404      OS Drosophila yakuba
#=GS B4P3Q5/313-404      DE Uncharacterized protein
#=GS B4P3Q5/313-404      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 21
Q27607/312-404              ----------LGWLEQSSLNSLVEVHRLYC------GGDTLSKEPRNIFVEGT------LEQVRQS--FQSLTNYCASDVEATHRILRVLYPLYAERFPHPASLAGMLEMGSAYLPV
E9HXB5/551-649              -------EHAPTWTKHTCPANLKDLANFLC-------GIKLDKDIKDLWVTKKKEAPKPFSVITEN--LNDIWRYAVMDTYATLEVYKKEYAEIA-KFPSLIYLVGQLERSTQMIG-
A0A0D1CMM9/489-585          -------SSESQWLEETSKNSLADVARLHR------IPIKVSKAARDVFVDGAS-----REEVLQD--VQHLLSYCASDVVVTHEIFRRTWPDFAARCPHPATMAGVFGLGSTFLPV
A9UXT9/188-289              -----NLSHAPRWVHESSPLSLVDVYRHTVDPKGHVDAKELSKETRNIFGS--------LDDVRDA--FQEVTTYCARDVLATLAIYQKILPKFLAHTGHLATLVGMLEMSKMYLPV
A8XZ80/26-137               SENKPPSDWVNTWKDRVSKNSLLAVHNHFY-PYKEVEKPKIDDESKDKLRSAFV--KEPIETIRAK--FQKLMTYCARDNILCAEIYYGLWPEFVKRFPHPATLSGMLNMGNVYLPI
F4PEI2/278-379              TD--LELADANPWLTKTSVNSLFEVAKLH-------LKRKVDKAVRDYFSSSD------MSQFDDPALFQTLMSYCAEDVKVTHELFGFLFPRFEVKCPHPASFAGVLHMGKSYLTV
A0A0F7S003/488-584          -------SAESQWLEETSKNSLADVARLHR------IPMKVSKSARDVFVDGTS-----REEILHD--AQHLLTYCASDVAVTHEIFRRIWPDFAARCPHPATMAGVFGLGSTFLPV
R9PNG7/479-576              ------VSSESQWLEETSKNSLADVARLHR------IPMKVSKAARDVFVDGAS-----REEILQD--VQHLLSYCASDVVVTHEIFRRTWPDFAARCPHPATMAGVFGLGSTFLPV
A0A077QWW3/481-577          -------SSESKWLEETSKNSLADVARLHR------IPMKVSKSARNVFVDGAS-----REEILGD--VQHLLSYCASDVVVTHEIFRRTWPDFAARCPHPATMAGVFGLGSTFLPV
I2FPZ7/485-583              -----PTTTESQWLEETSKNSLADVARLHR------IPMKVSKSARDVFVNGTS-----REEILKD--VQHLLTYCASDVVVTHEIFRRTWPDFAARCPHPATMAGVFGLGSTFLPV
E6ZN15/477-573              -------SAESQWLEETSKNSLADVARLHR------IPMKVSKSARDVFVDGTP-----REEILRD--AQHLLAYCASDVAVTHEIFRRTWPDFAARCPHPATMAGVFGLGSTFLPV
A0A177X140/367-468          TD--LELADANPWLTKTSVNSLFEVAKLH-------LKRKVDKAVRDYFSSSD------MSQFDDPALFQTLMSYCAEDVKVTHELFGFLFPRFEVKCPHPASFAGVLHMGKSYLTV
A0A2N8UH24/476-572          -------SAESQWLEETSKNSLADVARLHR------IPMKVSKSARDVFVDGTS-----REEILRD--AQHLLAYCASDVAVTHEIFRRTWPDFAARCPHPATMAGVFGLGSTFLPV
A0A127ZH83/488-584          -------SAESQWLEETSKNSLADVARLHR------IPMKVSKSARDVFVDGTS-----REEILHD--AQHLLTYCASDVAVTHEIFRRIWPDFAARCPHPATMAGVFGLGSTFLPV
B4HXA2/313-404              -----------GWLEQSSLNSLVEVHRLYC------GGDALSKEPRNIFVEGT------LEQVRQS--FQSLTNYCASDVEATHRILRVLYPLYAERFPHPASLAGMLEMGSAYLPV
A0A0J9TMZ7/313-404          -----------GWLEQSSLNSLVEVHRLYC------GGDALSKEPRNIFVEGT------LEQVRQS--FQSLTNYCASDVEATHRILRVLYPLYAERFPHPASLAGMLEMGSAYLPV
A0A1W4UUS9/312-403          -----------GWLEQSSLNSLVEVHRLYC------GGEPLSKEPRNIFVEGT------LDQVRQN--FQSLTNYCAGDVEATHRVLRVLYPLYAERFPHPASLAGMLEMGSAYLPV
B3MN26/310-401              -----------GWLDKSSLNSLVEVHRLYC------GGEPLSKEPRNIFVEGT------LEQVRQH--FQSLVNYCASDVEATHRVLQALYPLYAERFPHPASLAGMLEMGSAYLPV
A0A0N8NZ99/243-334          -----------GWLDKSSLNSLVEVHRLYC------GGEPLSKEPRNIFVEGT------LEQVRQH--FQSLVNYCASDVEATHRVLQALYPLYAERFPHPASLAGMLEMGSAYLPV
B3NAD1/313-404              -----------GWLEQSSLNSLVDVHRLYC------GGDALSKEPRNIFVEGT------LEQVRQS--FQSLTNYCASDVEATHRILRVLYPLYADRFPHPASLAGMLEMGSAYLPV
B4P3Q5/313-404              -----------GWLEQSSLNSLVEVHRLYC------GGDALSKEPRNIFVEGT------LEQVRQS--FQSLTNYCASDVEATHRILRVLYPLYADRFPHPASLAGMLEMGSAYLPV
#=GC scorecons              000000021223965558378946846653000000343566844764754541000004646343005847449784973586565534583663758778566956567546867
#=GC scorecons_70           ____________**___*_***_**_**_____________**__**_*____________________*_*__***_**__*__*_____*_*__*_****__**_*__*__****
#=GC scorecons_80           ____________*____*__**__*_________________*__*__*____________________*_*__***_*___*________*____*_****___*____*___*__
#=GC scorecons_90           ____________*____*__**__*_________________*_______________________________*_*_*____________*______*______*________*__
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