# STOCKHOLM 1.0
#=GF ID 3.30.420.140/FF/000013
#=GF DE Putative pre-16S rRNA nuclease
#=GF AC 3.30.420.140/FF/000013
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 89.051
#=GS O25101/1-134      AC O25101
#=GS O25101/1-134      OS Helicobacter pylori 26695
#=GS O25101/1-134      DE Putative pre-16S rRNA nuclease
#=GS O25101/1-134      DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GS Q9RRI2/16-136     AC Q9RRI2
#=GS Q9RRI2/16-136     OS Deinococcus radiodurans R1
#=GS Q9RRI2/16-136     DE Putative pre-16S rRNA nuclease
#=GS Q9RRI2/16-136     DR ORG; Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus; Deinococcus radiodurans; 
#=GS B8CG17/204-349    AC B8CG17
#=GS B8CG17/204-349    OS Thalassiosira pseudonana
#=GS B8CG17/204-349    DE Uncharacterized protein
#=GS B8CG17/204-349    DR ORG; Eukaryota; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira; Thalassiosira pseudonana; 
#=GS Q9ZB76/2-138      AC Q9ZB76
#=GS Q9ZB76/2-138      OS Mycoplasma genitalium G37
#=GS Q9ZB76/2-138      DE Putative pre-16S rRNA nuclease
#=GS Q9ZB76/2-138      DR ORG; Bacteria; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Mycoplasma; Mycoplasma genitalium; 
#=GS A0A2T6RMH6/1-130  AC A0A2T6RMH6
#=GS A0A2T6RMH6/1-130  OS Helicobacter pylori
#=GS A0A2T6RMH6/1-130  DE Putative pre-16S rRNA nuclease
#=GS A0A2T6RMH6/1-130  DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GS Q1CUG7/1-130      AC Q1CUG7
#=GS Q1CUG7/1-130      OS Helicobacter pylori HPAG1
#=GS Q1CUG7/1-130      DE Putative pre-16S rRNA nuclease
#=GS Q1CUG7/1-130      DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GS A0A2J9KK45/1-134  AC A0A2J9KK45
#=GS A0A2J9KK45/1-134  OS Helicobacter pylori
#=GS A0A2J9KK45/1-134  DE Putative pre-16S rRNA nuclease
#=GS A0A2J9KK45/1-134  DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GS A0A1Y3DZY2/1-134  AC A0A1Y3DZY2
#=GS A0A1Y3DZY2/1-134  OS Helicobacter pylori SS1
#=GS A0A1Y3DZY2/1-134  DE Putative pre-16S rRNA nuclease
#=GS A0A1Y3DZY2/1-134  DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GS B5ZAA2/1-133      AC B5ZAA2
#=GS B5ZAA2/1-133      OS Helicobacter pylori G27
#=GS B5ZAA2/1-133      DE Putative pre-16S rRNA nuclease
#=GS B5ZAA2/1-133      DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GS B6JKR0/1-134      AC B6JKR0
#=GS B6JKR0/1-134      OS Helicobacter pylori P12
#=GS B6JKR0/1-134      DE Putative pre-16S rRNA nuclease
#=GS B6JKR0/1-134      DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GS A0A1W0VPM7/1-130  AC A0A1W0VPM7
#=GS A0A1W0VPM7/1-130  OS Helicobacter pylori
#=GS A0A1W0VPM7/1-130  DE Putative pre-16S rRNA nuclease
#=GS A0A1W0VPM7/1-130  DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GS Q9ZMA5/1-130      AC Q9ZMA5
#=GS Q9ZMA5/1-130      OS Helicobacter pylori J99
#=GS Q9ZMA5/1-130      DE Putative pre-16S rRNA nuclease
#=GS Q9ZMA5/1-130      DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GS B2USG5/1-130      AC B2USG5
#=GS B2USG5/1-130      OS Helicobacter pylori Shi470
#=GS B2USG5/1-130      DE Putative pre-16S rRNA nuclease
#=GS B2USG5/1-130      DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GS A0A2A6T0W7/1-134  AC A0A2A6T0W7
#=GS A0A2A6T0W7/1-134  OS Helicobacter pylori
#=GS A0A2A6T0W7/1-134  DE Putative pre-16S rRNA nuclease
#=GS A0A2A6T0W7/1-134  DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter pylori; 
#=GF SQ 14
O25101/1-134              -MILACDVGLKRIGIAALLNGVILPLEA-ILRHNRNQASRDLSDL-LREKN----IQVLVVGKP---HESYADTNARIEHF-IKLVD-------FKGEIVFINEDRSSIEAYENL--EHLGKKNKRLAIKD--GRLDSLSACRILERYCQKVLKNH--
Q9RRI2/16-136             PTVLALDVSKSRIGFAVSAGRLAFGRGS-VDRKRLPLDLKAVRLK-VEETG----AERLVLGLPLRTDGKPSPTADRVRAFGRVLMD-------KGYTVEYQDERFTTQRARA-------------LGAAD--E--DEAAAVQILELWLMR-------
B8CG17/204-349            ----SEDTT---TATATATQTTANNSQSNIIQYNNTLLCNTIINY-AISEQ----VTNLVLGLPLHKNGSISEQSLITRQFGYELLQTVRTRMGYNANVTLWDERYTSKEAASRIVGEAIARNRRIPSASDLNGALDDEAACIILEHYYQALGQDAEV
Q9ZB76/2-138              KYILAIDFGLKKIGTAIANTLDKYPSAF-HVFEVKNNFKTAVNNLFLRIKNDGYELEKIVIGFP--KFHYYSDIQKAIKSF-KQLLEK-----RFNLPIILVDESNTTSAVKDKL--ITMDLKHKDFKKAK-----DTLAAVLILERFFQNYH-----
A0A2T6RMH6/1-130          -MILACDVGLKRIGIAALLNGVILPLEA-ILRQNRNQASRDLSDL-LREKN----IQVLVVGKP---NESYADTNARIEHF-IKLVD-------FKGEIVFINEDNSSIEAYENL--EHLGKKNKWLAIKD--GRLDSLSACRILERYCQQV------
Q1CUG7/1-130              -MILACDVGLKRIGIAALLNGVILPLEA-ILRQNRNQASRDLSDL-LREKN----IQVLVVGKP---NESYADTNARIEHF-IKLVD-------FKGEIVFINEDNSSIEAYENL--EHLGKKNKWLAIKD--GRLDSLSACRILERYCQQV------
A0A2J9KK45/1-134          -MILACDVGLKRIGIAALLNGVILPLEA-ILRHNRNQASRDLSDL-LREKN----IQVLVVGKP---HESYADTNARIEHF-IKLVD-------FKGEIVFINEDRSSIEAYENL--EHLGKKNKRLAIKD--GRLDSLSACRILERYCQKVLKNH--
A0A1Y3DZY2/1-134          -MILACDVGLKRIGIAALLNGVILPLEA-ILRHNRNQASRDLSDL-LREKN----IQVLVVGKP---HESYADTNARIEHF-IKLVD-------FKGEIVFINEDRSSIEAYENL--EHLGKKNKRLAIKD--GRLDSLSACRILERYCQKVLKNH--
B5ZAA2/1-133              -MILACDVGLKRIGIAALLNGVILPLEA-ILRHNRNQASRDLSDL-LREKN----IQVLVVGKP---NESYADTNARIEHF-IKLVD-------FKGEIVFINEDNSSIEAYENL--EHLGRKNKRLATKD--GRLDSLSACRILERYCQQVLKK---
B6JKR0/1-134              -MILACDVGLKRIGIAALLNGVVLPLEA-ILRHNRNQASRDLSDL-LREKN----IQVLVVGKP---NESYADTNVRIEHF-IKLVD-------FTGEIVFINEDNSSIEAYDNL--EHLGRKNKRLATKD--GRLDSLSACRILERYCQQVLKNH--
A0A1W0VPM7/1-130          -MILACDVGLKRIGIAALLNGVILPLEA-ILRHNRNQASRDLSDL-LRKKD----IQVLVVGKP---NESYADTHARIEHF-IKLVD-------FKGEIVFINEDNSSVEAYENL--EHLGKKNKRIATKD--GRLDSLSACRILERYCQQV------
Q9ZMA5/1-130              -MILACDVGLKRIGIAALLNGVILPLEA-ILRHNRNQASRDLSDL-LRKKD----IQVLVVGKP---NESYADTHARIEHF-IKLVD-------FKGEIVFINEDNSSVEAYENL--EHLGKKNKRIATKD--GRLDSLSACRILERYCQQV------
B2USG5/1-130              -MILACDVGLKRIGIAVLLNGVILPLEA-ILRHNRNQASRDLNDL-LREKN----IQVLVVGKP---NESYADTNARIEHF-IKLLD-------FKGEIVFINEDRSSIEAYENL--GHLGKKNKRLAIKD--GRLDSLSACGILERYCQQV------
A0A2A6T0W7/1-134          -MILACDVGLKRIGIAVLLNGVVLPLEA-ILRRNRNQASRDLSDL-LREKN----IQVLVVGKP---NESYVDMNARIEHF-IKLVD-------FKGEIVFINEDNSSIEAYENL--EYLGKKNKRLATKD--GRLDSLSACKILECYCQQVLKNH--
#=GC scorecons            03567395544577594444444454440545454543454544405545500005537969390004554555435654903495600000005434745369435635734350043433435254447005249445953999464643010000
#=GC scorecons_70         ____*_*_____**_*__________________________________________**_*_*_____________*__*___*_*___________*___**___*__*___________________*_____*___*__***_*_*________
#=GC scorecons_80         ____*_*_____**_*__________________________________________**_*_*________________*___*_____________*____*______*___________________*_____*___*__***____________
#=GC scorecons_90         ______*________*___________________________________________*_*_*________________*___*__________________*________________________________*___*__***____________
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