# STOCKHOLM 1.0
#=GF ID 3.30.420.10/FF/000120
#=GF DE Poly(A)-specific ribonuclease PARN
#=GF AC 3.30.420.10/FF/000120
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 83.161
#=GS Q7ZU92/226-434      AC Q7ZU92
#=GS Q7ZU92/226-434      OS Danio rerio
#=GS Q7ZU92/226-434      DE Poly(A)-specific ribonuclease PARN
#=GS Q7ZU92/226-434      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q7ZU92/226-434      DR GO; GO:0003723; GO:0030097; GO:0043169; 
#=GS Q7ZU92/226-434      DR EC; 3.1.13.4; 
#=GS Q90ZA1/230-435      AC Q90ZA1
#=GS Q90ZA1/230-435      OS Xenopus laevis
#=GS Q90ZA1/230-435      DE Poly(A)-specific ribonuclease PARN
#=GS Q90ZA1/230-435      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS Q90ZA1/230-435      DR GO; GO:0003723; GO:0043169; 
#=GS Q90ZA1/230-435      DR EC; 3.1.13.4; 
#=GS A7T0T2/220-445      AC A7T0T2
#=GS A7T0T2/220-445      OS Nematostella vectensis
#=GS A7T0T2/220-445      DE Predicted protein
#=GS A7T0T2/220-445      DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS D6WYW0/193-427      AC D6WYW0
#=GS D6WYW0/193-427      OS Tribolium castaneum
#=GS D6WYW0/193-427      DE Poly(A)-specific ribonuclease PARN-like Protein
#=GS D6WYW0/193-427      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS E9HMS2/240-439      AC E9HMS2
#=GS E9HMS2/240-439      OS Daphnia pulex
#=GS E9HMS2/240-439      DE Uncharacterized protein
#=GS E9HMS2/240-439      DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia pulex; 
#=GS A7S1J3/263-483      AC A7S1J3
#=GS A7S1J3/263-483      OS Nematostella vectensis
#=GS A7S1J3/263-483      DE Predicted protein
#=GS A7S1J3/263-483      DR ORG; Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella; Nematostella vectensis; 
#=GS F6PI67/197-448      AC F6PI67
#=GS F6PI67/197-448      OS Ciona intestinalis
#=GS F6PI67/197-448      DE Uncharacterized protein
#=GS F6PI67/197-448      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS W5LXE4/234-436      AC W5LXE4
#=GS W5LXE4/234-436      OS Lepisosteus oculatus
#=GS W5LXE4/234-436      DE Uncharacterized protein
#=GS W5LXE4/234-436      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS F6UAK5/229-435      AC F6UAK5
#=GS F6UAK5/229-435      OS Xenopus tropicalis
#=GS F6UAK5/229-435      DE Poly(A)-specific ribonuclease
#=GS F6UAK5/229-435      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS A0A1L8EXJ1/230-435  AC A0A1L8EXJ1
#=GS A0A1L8EXJ1/230-435  OS Xenopus laevis
#=GS A0A1L8EXJ1/230-435  DE Uncharacterized protein
#=GS A0A1L8EXJ1/230-435  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS A0A1L8EXJ1/230-435  DR EC; 3.1.13.4; 
#=GS A0A1W2WH95/197-447  AC A0A1W2WH95
#=GS A0A1W2WH95/197-447  OS Ciona intestinalis
#=GS A0A1W2WH95/197-447  DE poly(A)-specific ribonuclease PARN
#=GS A0A1W2WH95/197-447  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS A0A0R4IW61/225-434  AC A0A0R4IW61
#=GS A0A0R4IW61/225-434  OS Danio rerio
#=GS A0A0R4IW61/225-434  DE Poly(A)-specific ribonuclease PARN
#=GS A0A0R4IW61/225-434  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A0R4IHL6/225-434  AC A0A0R4IHL6
#=GS A0A0R4IHL6/225-434  OS Danio rerio
#=GS A0A0R4IHL6/225-434  DE Poly(A)-specific ribonuclease PARN
#=GS A0A0R4IHL6/225-434  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS F6XLZ1/231-437      AC F6XLZ1
#=GS F6XLZ1/231-437      OS Xenopus tropicalis
#=GS F6XLZ1/231-437      DE Poly(A)-specific ribonuclease
#=GS F6XLZ1/231-437      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS A0A1L8EQ87/230-435  AC A0A1L8EQ87
#=GS A0A1L8EQ87/230-435  OS Xenopus laevis
#=GS A0A1L8EQ87/230-435  DE Uncharacterized protein
#=GS A0A1L8EQ87/230-435  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis; 
#=GS Q28DE5/23-227       AC Q28DE5
#=GS Q28DE5/23-227       OS Xenopus tropicalis
#=GS Q28DE5/23-227       DE Novel protein similar to poly(A)-specific ribonuclease (Deadenylation nuclease)
#=GS Q28DE5/23-227       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS W5LXH8/234-436      AC W5LXH8
#=GS W5LXH8/234-436      OS Lepisosteus oculatus
#=GS W5LXH8/234-436      DE Uncharacterized protein
#=GS W5LXH8/234-436      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GF SQ 17
Q7ZU92/226-434              -------------------------------------EAL--ETEKKERFIQISKVD-DEERRRREQQKQQREQEELNDAVGFSRVIRAISKSGKLVVGHNMLLDVMHTIHQFCGPLPEELDDFKEVAMTVFPRLLDTKLMASTQPFKEIIHNTSLAELHKQLRQKPFRPPTTECPEGLQSYDTSTE--QLHEAGYDAFITGLCFISMANYLGS-FLTPPKSHISARS--KLLEPFYNKLFLMRVIDIPYLNMS----
Q90ZA1/230-435              ------------------------------------------ESEKKERYIVISKVD-EEERKRMEQQKQAKEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMASTNPFKEIIYNTSLAELEKRLKEAPFKPPKVDSAEGFQSYNTASE--QLHEAGYDAYITGLCFISMANYLGS-FLSPPKDYVSCRS--KIVRPFFNKLFLMRIMDIPYLNLE----
A7T0T2/220-445              ------------------------QTVKHRFRSGIHLEKN--MNEKKECFIVATKVD-DNEKKTFEEEKMAKEDELIESAVGFSAVMKMISDSGKLVVGHNMLLDLLHIVDQFFCPLPADLDDFKATVQSLLPRVLDTKVMATTQPFKNHLPSTVLGDLVKHLTVSPFRRPEVFTDQQFSLYEEGSE--NLHEAAYDAYITGLSFVSMANYLGS-FQDPPKVHISPDS--ALVTPFINKIFMMRMEDIPYLNLAGPDL
D6WYW0/193-427              -----------LPKCNAFVRRLIYQTTGQKFTNKIVLHTK--QNKNKDRILVASKCKTKEEQQEIEKRLFEEELTNLDDFIGFTKVLRIIVESGKLIVGHNMCLDFLHTIDKFLTPLSVNYEEFKDCAHSLFRNVLDTKFMSSSDEFKDLIQSTVLKSVLETVSKTPFAIPPVEVEKGGQGYFVEDL--KEHEAGYDAYITGLCFISMWNYLGT-LKKLSIEETFKDF--ALLKPYLNKLFLMMLRDSQYINL-----
E9HMS2/240-439              ---------------------------------------------KK----AASSCN-LEKESVDKKSLPAAEKPRIEDYMGFSEVVRKITNSGKLVVGHNMLLDLCHILGQFCEPLPEDYEEFKAMTNTFFPRVIDTKVMATTKPFRDLLPNSALGPLLKALLKAPFRNTEIVTAKDFPSYKDDSL--KEHEAGYDAFVTGRCLIALTNYLGKLFYASHKAAAVHES--SLIAPFYQKIYMMMVTDIPYMTLS----
A7S1J3/263-483              -------------------------TVKHRFRSGIHLEKN--MNEKKECFIVATKVD-DNEKKKFEEEKMAKEDELIESAVGFSAVMKMISDSGKLVVGHNMLLDLLHIVDQFFCPLPADLDDFKATVQSLLPRVLDTKVMATTQPFKNHLPSTVLGDLVKHLTVSPFRRPEVFTDQQFSLYEEGSE--NLHEAAYDAYITGLSFVSMANYLGS-FQDPPKVHISPDS--ALVTPFINKIFMMRMEDIPYLNLA----
F6PI67/197-448              FLENTEDSEIVLEPCNSYLRKILFENIPAAFPGKILVESRTDEQTHQRHIVVVRGAS-ASLQKERNLQAKVKEESNLEEAVGFSKIVKKLSQSQKLIVGHNMLLDVFYTIQQFVCPLPDVLEEFKSLVGCVFPKLLDTKLMGSMLPFRDLLSTTALGDMNARLREPPFQPPDITVPGKYNVGSTKSQDSNLHEAAYDAYVTGSAFLSMVNYLKS-FQTNKKILTSFSSLCSLISPYVNKVFLMRSFDIPYLNLS----
W5LXE4/234-436              ---------------------------------------------KKERCILISKVD-EEERKRREQYKQEKEQEELNDAVGFSRVIHAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEALNEFKEVTMCVFPRLLDTKLMASTQPFKELINNTSLAELEKQLKETPFKPPKVESADGFPSYNTASE--QLHEAGYDAYITGLCFISMANYFGT-FLTPPKQHISARS--KLIEPFFNKLFLMRVIDIPYLNIS----
F6UAK5/229-435              ---------------------------------------L--ESEKKERYIVISKVD-EEERKRMEQQKQAKEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDIMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMASTNPFKEIIYNTSLAELEKRLKEAPFKPPKVDSAEGFPSYNTASE--QLHEAGYDAYITGLCFISMANYLGS-FLSPPKGYVSSRS--KIIRPFFNKLFLMRIMDIPYLNLE----
A0A1L8EXJ1/230-435          ------------------------------------------ESEKKERYIVISKVD-EEERKRMEQQKQAKEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMASTNPFKEIIYNTSLAELEKRLKEAPFKPPKVDSAEGFQSYNTASE--QLHEAGYDAYITGLCFISMANYLGS-FLSPPKDYVSCRS--KIVRPFFNKLFLMRIMDIPYLNLE----
A0A1W2WH95/197-447          -LENTEDSEIVLEPCNSYLRKILFENIPAAFPGKILVESRTDEQTHQRHIVVVRGAS-ASLQKERNLQAKVKEESNLEEAVGFSKIVKKLSQSQKLIVGHNMLLDVFYTIQQFVCPLPDVLEEFKSLVGCVFPKLLDTKLMGSMLPFRDLLSTTALGDMNARLREPPFQPPDITVPGKYNVGSTKSQDSNLHEAAYDAYVTGSAFLSMVNYLKS-FQTNKKILTSFSSLCSLISPYVNKVFLMRSFDIPYLNLS----
A0A0R4IW61/225-434          ------------------------------------VETL--ETEKKERFIQISKVD-DEERRRREQQKQQREQEELNDAVGFSRVIRAISKSGKLVVGHNMLLDVMHTIHQFCGPLPEELDDFKEVAMTVFPRLLDTKLMASTQPFKEIIHNTSLAELHKQLRQKPFRPPTTECPEGLQSYDTSTE--QLHEAGYDAFITGLCFISMANYLGS-FLTPPKSHISARS--KLLEPFYNKLFLMRVIDIPYLNMS----
A0A0R4IHL6/225-434          ------------------------------------VETL--ETEKKERFIQISKVD-DEERRRREQQKQQREQEELNDAVGFSRVIRAISKSGKLVVGHNMLLDVMHTIHQFCGPLPEELDDFKEVAMTVFPRLLDTKLMASTQPFKEIIHNTSLAELHKQLRQKPFRPPTTECPEGLQSYDTSTE--QLHEAGYDAFITGLCFISMANYLGS-FLTPPKSHISARS--KLLEPFYNKLFLMRVIDIPYLNMS----
F6XLZ1/231-437              ---------------------------------------L--ESEKKERYIVISKVD-EEERKRMEQQKQAKEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDIMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMASTNPFKEIIYNTSLAELEKRLKEAPFKPPKVDSAEGFPSYNTASE--QLHEAGYDAYITGLCFISMANYLGS-FLSPPKGYVSSRS--KIIRPFFNKLFLMRIMDIPYLNLE----
A0A1L8EQ87/230-435          ------------------------------------------ESEKKERYIVISKVD-EEERKRMEQQKQAKEREELDDAVGFSRIIQAISSSAKLVVGHNMLLDIMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMASTNPFKEIIYNTSLAELEKRLKEAPFKPPKVDSAEGFPSYNTASE--QLHEAGYDAYITGLCFISMANYLGS-FLSPPKGYVSSQS--KIIRPFFNKLFLMRIMDIPYLNLE----
Q28DE5/23-227               -------------------------------------------SEKKERYIVISKVD-EEERKRMEQQKQAKEREELDDAVGFSRIIQAISSSGKLVVGHNMLLDIMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMASTNPFKEIIYNTSLAELEKRLKEAPFKPPKVDSAEGFPSYNTASE--QLHEAGYDAYITGLCFISMANYLGS-FLSPPKGYVSSRS--KIIRPFFNKLFLMRIMDIPYLNLE----
W5LXH8/234-436              ---------------------------------------------KKERCILISKVD-EEERKRREQYKQEKEQEELNDAVGFSRVIHAISKSGKLVVGHNMLLDVMHTIHQFYCPLPEALNEFKEVTMCVFPRLLDTKLMASTQPFKELINNTSLAELEKQLKETPFKPPKVESADGFPSYNTASE--QLHEAGYDAYITGLCFISMANYFGT-FLTPPKQHISARS--KLIEPFFNKLFLMRVIDIPYLNIS----
#=GC scorecons              000000000000000000000000000000100010121100323675435555655045556436454446935475667997576547639699799999799557675894569754657994453567766899969666379765635859556364844499558463444554463536500569996999779955868859986608445573456347004763974796879643977978740000
#=GC scorecons_70           _____________________________________________**_______________*__*______*___*_******_*___**_*************__***_**__***__*_***_____*************__***__*__*_*__*___*___**__*__________*___*____************__****_****__*____*___*__*___*__**_**_****__*******_____
#=GC scorecons_80           ______________________________________________*_________________________*_______****_____*__*_***********__*_*_**___**____***______**__****_*____***_____*_*______*___**__*____________________***_*******__*_**_***___*____*______*______**_**_***___******______
#=GC scorecons_90           ________________________________________________________________________*________**_________*_**_*****_**______**___*______**__________****_*_____*________*______*___**_______________________***_***__**__*__*_***___*__________________*___*_*_*___*__*________
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