# STOCKHOLM 1.0
#=GF ID 3.30.40.210/FF/000004
#=GF DE Transcription elongation factor SPT4
#=GF AC 3.30.40.210/FF/000004
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 61.755
#=GS Q8IJA5/30-132      AC Q8IJA5
#=GS Q8IJA5/30-132      OS Plasmodium falciparum 3D7
#=GS Q8IJA5/30-132      DE Transcription elongation factor SPT4, putative
#=GS Q8IJA5/30-132      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IJA5/30-132      DR GO; GO:0003682; GO:0003700; GO:0006351; 
#=GS Q54NF2/6-91        AC Q54NF2
#=GS Q54NF2/6-91        OS Dictyostelium discoideum
#=GS Q54NF2/6-91        DE Transcription initiation factor Spt4
#=GS Q54NF2/6-91        DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q54NF2/6-91        DR GO; GO:0005634; GO:0006357; 
#=GS F1A3F8/1-73        AC F1A3F8
#=GS F1A3F8/1-73        OS Dictyostelium purpureum
#=GS F1A3F8/1-73        DE Uncharacterized protein
#=GS F1A3F8/1-73        DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS A0A2P9BF01/30-132  AC A0A2P9BF01
#=GS A0A2P9BF01/30-132  OS Plasmodium sp. gorilla clade G1
#=GS A0A2P9BF01/30-132  DE Transcription elongation factor SPT4, putative
#=GS A0A2P9BF01/30-132  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. gorilla clade G1; 
#=GS A0A2P9C3X3/32-133  AC A0A2P9C3X3
#=GS A0A2P9C3X3/32-133  OS Plasmodium sp. gorilla clade G2
#=GS A0A2P9C3X3/32-133  DE Transcription elongation factor SPT4, putative
#=GS A0A2P9C3X3/32-133  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. gorilla clade G2; 
#=GS A0A151LL20/32-133  AC A0A151LL20
#=GS A0A151LL20/32-133  OS Plasmodium gaboni
#=GS A0A151LL20/32-133  DE Putative transcription elongation factor SPT4
#=GS A0A151LL20/32-133  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium gaboni; 
#=GS A0A2P9CQB1/32-133  AC A0A2P9CQB1
#=GS A0A2P9CQB1/32-133  OS Plasmodium sp. DRC-Itaito
#=GS A0A2P9CQB1/32-133  DE Transcription elongation factor SPT4, putative
#=GS A0A2P9CQB1/32-133  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. DRC-Itaito; 
#=GS A0A060RTG5/31-133  AC A0A060RTG5
#=GS A0A060RTG5/31-133  OS Plasmodium reichenowi
#=GS A0A060RTG5/31-133  DE Transcription elongation factor SPT4, putative
#=GS A0A060RTG5/31-133  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A2P9D8C8/31-133  AC A0A2P9D8C8
#=GS A0A2P9D8C8/31-133  OS Plasmodium sp. gorilla clade G3
#=GS A0A2P9D8C8/31-133  DE Transcription elongation factor SPT4, putative
#=GS A0A2P9D8C8/31-133  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. gorilla clade G3; 
#=GS A0A024X6E4/30-132  AC A0A024X6E4
#=GS A0A024X6E4/30-132  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024X6E4/30-132  DE Uncharacterized protein
#=GS A0A024X6E4/30-132  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L0CT93/30-132  AC A0A0L0CT93
#=GS A0A0L0CT93/30-132  OS Plasmodium falciparum RAJ116
#=GS A0A0L0CT93/30-132  DE Transcription factor
#=GS A0A0L0CT93/30-132  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BQI8/30-132  AC A0A2I0BQI8
#=GS A0A2I0BQI8/30-132  OS Plasmodium falciparum NF54
#=GS A0A2I0BQI8/30-132  DE Transcription elongation factor SPT4
#=GS A0A2I0BQI8/30-132  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024V5K9/30-132  AC A0A024V5K9
#=GS A0A024V5K9/30-132  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024V5K9/30-132  DE Uncharacterized protein
#=GS A0A024V5K9/30-132  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7G4Y4/30-132      AC W7G4Y4
#=GS W7G4Y4/30-132      OS Plasmodium falciparum Santa Lucia
#=GS W7G4Y4/30-132      DE Uncharacterized protein
#=GS W7G4Y4/30-132      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024W6D3/30-132  AC A0A024W6D3
#=GS A0A024W6D3/30-132  OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024W6D3/30-132  DE Uncharacterized protein
#=GS A0A024W6D3/30-132  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7F053/30-132      AC W7F053
#=GS W7F053/30-132      OS Plasmodium falciparum 7G8
#=GS W7F053/30-132      DE Uncharacterized protein
#=GS W7F053/30-132      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7M696/30-132  AC A0A0L7M696
#=GS A0A0L7M696/30-132  OS Plasmodium falciparum Dd2
#=GS A0A0L7M696/30-132  DE Uncharacterized protein
#=GS A0A0L7M696/30-132  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7K8Y1/30-132  AC A0A0L7K8Y1
#=GS A0A0L7K8Y1/30-132  OS Plasmodium falciparum HB3
#=GS A0A0L7K8Y1/30-132  DE Uncharacterized protein
#=GS A0A0L7K8Y1/30-132  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IHE6/30-132      AC W4IHE6
#=GS W4IHE6/30-132      OS Plasmodium falciparum NF135/5.C10
#=GS W4IHE6/30-132      DE Uncharacterized protein
#=GS W4IHE6/30-132      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1ICQ0/30-132  AC A0A0L1ICQ0
#=GS A0A0L1ICQ0/30-132  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1ICQ0/30-132  DE Transcription factor
#=GS A0A0L1ICQ0/30-132  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7K4P5/11-111      AC W7K4P5
#=GS W7K4P5/11-111      OS Plasmodium falciparum NF54
#=GS W7K4P5/11-111      DE Uncharacterized protein
#=GS W7K4P5/11-111      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4J459/32-134      AC W4J459
#=GS W4J459/32-134      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4J459/32-134      DE Uncharacterized protein
#=GS W4J459/32-134      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JMT2/27-127      AC W7JMT2
#=GS W7JMT2/27-127      OS Plasmodium falciparum UGT5.1
#=GS W7JMT2/27-127      DE Uncharacterized protein
#=GS W7JMT2/27-127      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2P9GL36/31-133  AC A0A2P9GL36
#=GS A0A2P9GL36/31-133  OS Plasmodium sp. DRC-Itaito
#=GS A0A2P9GL36/31-133  DE Transcription elongation factor SPT4, putative
#=GS A0A2P9GL36/31-133  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. DRC-Itaito; 
#=GF SQ 24
Q8IJA5/30-132              SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
Q54NF2/6-91                GRDESIVPSSFKHARACTECGLVKSAQQFEDNGCENCS---------SSSSSTTQNFEGIIAIMNPKESWIARRLQFERRVPGLYALSMDSD--------TRR
F1A3F8/1-73                ------VPPSFKQSRACVDCGLVKTAQQFDENGCENC----------EGTNSTTQNFEGVIAIMNPGQSWIARRMRSEKKVPGLYALSM--------------
A0A2P9BF01/30-132          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A2P9C3X3/32-133          -RSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A151LL20/32-133          -RSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A2P9CQB1/32-133          -RSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A060RTG5/31-133          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A2P9D8C8/31-133          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A024X6E4/30-132          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A0L0CT93/30-132          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A2I0BQI8/30-132          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A024V5K9/30-132          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
W7G4Y4/30-132              SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A024W6D3/30-132          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
W7F053/30-132              SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A0L7M696/30-132          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A0L7K8Y1/30-132          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
W4IHE6/30-132              SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A0L1ICQ0/30-132          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
W7K4P5/11-111              --SGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
W4J459/32-134              SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
W7JMT2/27-127              --SGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
A0A2P9GL36/31-133          SRSGLQEDKALLKLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMAQYNDLSKYAPGFYALQVIGELPESIRDLKPN
#=GC scorecons             2433324445645499944956696556945999499322222222244455996995956995594599696444457459969995623422222222333
#=GC scorecons_70          ______________***__*_*_**___*__***_**_______________**_**_*_***__*__****______*__**_***________________
#=GC scorecons_80          ______________***__*___*____*__***_**_______________**_**_*__**__*__**_*______*__**_***________________
#=GC scorecons_90          ______________***__*___*____*__***_**_______________**_**_*__**__*__**_*_________**_***________________
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