# STOCKHOLM 1.0
#=GF ID 3.30.390.110/FF/000004
#=GF DE Large subunit ribosomal protein L28e
#=GF AC 3.30.390.110/FF/000004
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 78.092
#=GS D0MYV3/3-123       AC D0MYV3
#=GS D0MYV3/3-123       OS Phytophthora infestans T30-4
#=GS D0MYV3/3-123       DE Ribosomal protein L28, putative
#=GS D0MYV3/3-123       DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS E3K9D8/63-188      AC E3K9D8
#=GS E3K9D8/63-188      OS Puccinia graminis f. sp. tritici CRL 75-36-700-3
#=GS E3K9D8/63-188      DE Uncharacterized protein
#=GS E3K9D8/63-188      DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia graminis; 
#=GS Q5KLF0/2-128       AC Q5KLF0
#=GS Q5KLF0/2-128       OS Cryptococcus neoformans var. neoformans JEC21
#=GS Q5KLF0/2-128       DE 60s ribosomal protein, putative
#=GS Q5KLF0/2-128       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A329T2H7/3-123   AC A0A329T2H7
#=GS A0A329T2H7/3-123   OS Phytophthora cactorum
#=GS A0A329T2H7/3-123   DE Uncharacterized protein
#=GS A0A329T2H7/3-123   DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora cactorum; 
#=GS H3GXK3/11-131      AC H3GXK3
#=GS H3GXK3/11-131      OS Phytophthora ramorum
#=GS H3GXK3/11-131      DE Uncharacterized protein
#=GS H3GXK3/11-131      DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum; 
#=GS A0A080ZKC5/3-123   AC A0A080ZKC5
#=GS A0A080ZKC5/3-123   OS Phytophthora parasitica P1976
#=GS A0A080ZKC5/3-123   DE Uncharacterized protein
#=GS A0A080ZKC5/3-123   DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS A0A0W8DRU6/3-123   AC A0A0W8DRU6
#=GS A0A0W8DRU6/3-123   OS Phytophthora nicotianae
#=GS A0A0W8DRU6/3-123   DE 60S ribosomal protein L28
#=GS A0A0W8DRU6/3-123   DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora nicotianae; 
#=GS G5AEQ3/3-123       AC G5AEQ3
#=GS G5AEQ3/3-123       OS Phytophthora sojae strain P6497
#=GS G5AEQ3/3-123       DE Uncharacterized protein
#=GS G5AEQ3/3-123       DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora sojae; 
#=GS A0A0D0V2I6/2-128   AC A0A0D0V2I6
#=GS A0A0D0V2I6/2-128   OS Cryptococcus gattii VGII Ram5
#=GS A0A0D0V2I6/2-128   DE Unplaced genomic scaffold supercont1.12, whole genome shotgun sequence
#=GS A0A0D0V2I6/2-128   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS A0A2N5U9R0/62-185  AC A0A2N5U9R0
#=GS A0A2N5U9R0/62-185  OS Puccinia coronata var. avenae f. sp. avenae
#=GS A0A2N5U9R0/62-185  DE Uncharacterized protein
#=GS A0A2N5U9R0/62-185  DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia; Puccinia coronata; Puccinia coronata var. avenae; 
#=GS E6QYY3/2-128       AC E6QYY3
#=GS E6QYY3/2-128       OS Cryptococcus gattii WM276
#=GS E6QYY3/2-128       DE 60s ribosomal protein, putative
#=GS E6QYY3/2-128       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A0D0YPW0/2-128   AC A0A0D0YPW0
#=GS A0A0D0YPW0/2-128   OS Cryptococcus gattii VGIV IND107
#=GS A0A0D0YPW0/2-128   DE Unplaced genomic scaffold supercont2.11, whole genome shotgun sequence
#=GS A0A0D0YPW0/2-128   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIV; 
#=GS A0A0D0TJX6/2-128   AC A0A0D0TJX6
#=GS A0A0D0TJX6/2-128   OS Cryptococcus gattii CA1280
#=GS A0A0D0TJX6/2-128   DE Unplaced genomic scaffold supercont1.11, whole genome shotgun sequence
#=GS A0A0D0TJX6/2-128   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGIII; 
#=GS A0A225ZQQ6/2-128   AC A0A225ZQQ6
#=GS A0A225ZQQ6/2-128   OS Cryptococcus neoformans var. grubii c45
#=GS A0A225ZQQ6/2-128   DE Large subunit ribosomal protein L28e
#=GS A0A225ZQQ6/2-128   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS W2ICR5/3-123       AC W2ICR5
#=GS W2ICR5/3-123       OS Phytophthora parasitica
#=GS W2ICR5/3-123       DE Uncharacterized protein
#=GS W2ICR5/3-123       DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2WCL2/3-123       AC W2WCL2
#=GS W2WCL2/3-123       OS Phytophthora parasitica CJ01A1
#=GS W2WCL2/3-123       DE Uncharacterized protein
#=GS W2WCL2/3-123       DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2YML2/3-123       AC W2YML2
#=GS W2YML2/3-123       OS Phytophthora parasitica P10297
#=GS W2YML2/3-123       DE Uncharacterized protein
#=GS W2YML2/3-123       DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS V9EH49/3-123       AC V9EH49
#=GS V9EH49/3-123       OS Phytophthora parasitica P1569
#=GS V9EH49/3-123       DE Uncharacterized protein
#=GS V9EH49/3-123       DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS W2R356/3-123       AC W2R356
#=GS W2R356/3-123       OS Phytophthora parasitica INRA-310
#=GS W2R356/3-123       DE Uncharacterized protein
#=GS W2R356/3-123       DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora parasitica; 
#=GS Q2M3Y8/3-123       AC Q2M3Y8
#=GS Q2M3Y8/3-123       OS Phytophthora infestans
#=GS Q2M3Y8/3-123       DE Ribosomal protein L28
#=GS Q2M3Y8/3-123       DR ORG; Eukaryota; Oomycetes; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora infestans; 
#=GS F5HH08/2-128       AC F5HH08
#=GS F5HH08/2-128       OS Cryptococcus neoformans var. neoformans B-3501A
#=GS F5HH08/2-128       DE Uncharacterized protein
#=GS F5HH08/2-128       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. neoformans; 
#=GS A0A095CJU4/2-128   AC A0A095CJU4
#=GS A0A095CJU4/2-128   OS Cryptococcus gattii VGII R265
#=GS A0A095CJU4/2-128   DE 50S small subunit ribosomal protein L28e
#=GS A0A095CJU4/2-128   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGII; 
#=GS A0A0D0WAN3/2-128   AC A0A0D0WAN3
#=GS A0A0D0WAN3/2-128   OS Cryptococcus gattii EJB2
#=GS A0A0D0WAN3/2-128   DE Unplaced genomic scaffold supercont1.111, whole genome shotgun sequence
#=GS A0A0D0WAN3/2-128   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus gattii species complex; Cryptococcus gattii VGI; 
#=GS A0A226BM28/2-128   AC A0A226BM28
#=GS A0A226BM28/2-128   OS Cryptococcus neoformans var. grubii Bt85
#=GS A0A226BM28/2-128   DE Large subunit ribosomal protein L28e
#=GS A0A226BM28/2-128   DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GS J9VHC1/2-128       AC J9VHC1
#=GS J9VHC1/2-128       OS Cryptococcus neoformans var. grubii H99
#=GS J9VHC1/2-128       DE Large subunit ribosomal protein L28e
#=GS J9VHC1/2-128       DR ORG; Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex; Cryptococcus neoformans; Cryptococcus neoformans var. grubii; 
#=GF SQ 25
D0MYV3/3-123               SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLASTKAVDISISDKKVTLTTKIEKATKKPAK---AQNAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
E3K9D8/63-188              SADLQWFLLRGWNSKVVKRGSAGFMFSSESGNLKNKHSPRYSGLVHPKPMAVTPAPSGGVLITTR-KASANPRHIKSARSTVRVKGSMAGSRRAAGKAA--KAAKNYRSDLARAAILRAARIAQSNIRT-
Q5KLF0/2-128               SSDLTWLLVRNWNSFQVKGG-HGPVFSREKGNLLNKSAHKYSGLANSKVVSIHPSAAGGITITKI-KADAKPNQVASARSHVTLKRS-TGPRRANKIAAAETAGKGYRADLRAVAVARTSALLRAERRTA
A0A329T2H7/3-123           SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLASSKAVDISLADKKVTLTTKIAKATKKPAK---AENAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
H3GXK3/11-131              SDTLTWLLTKNTSSFLVKRN--GNEFAREKYNLLNRNCRKYSGLASTKAVDLSIADKKITLSTKIEKAGKKPSK---SNNDVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
A0A080ZKC5/3-123           SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLASTKAVDISLADKKVTLTTKIEKASKKPVK---AENAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
A0A0W8DRU6/3-123           SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLASTKAVDISLADKKVTLTTKIEKASKKPVK---AENAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
G5AEQ3/3-123               SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLAATKAVDVSIADKKVTLSTKIEKAAKKPVK---AVNAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
A0A0D0V2I6/2-128           SSDLTWLLVRNWNSFQVKGG-HGPVFSKEKGNLLNKSAHKYSGLANSKVVSIHPSAAGGITITKI-KADAKPNQVVSARSHVALKRS-TGPRRANKIAAAETAGKGYRADLRAVAVARTSALLRAERRTA
A0A2N5U9R0/62-185          SADLQWFLVRGWNSRVVKRG--GFMFSSEPGNLKNKHSPRYSGLIHPKPMSVTPAPSGGVLITTR-KDSANPRQLKAARNTVRVKGSMAGSRRAAGKAA--KAAKNYRSDLARAAILRAARIAQSNVRS-
E6QYY3/2-128               SSDLTWLLVRNWNSFQVKGG-HGPVFSKEKGNLLNKSAHKYSGLANSKVVSIHPSADGGITITKI-KADAKPNQVVSARSHVALKRS-TGPRRANKIAAAETAGKGYRADLRAVAVARTSALLRAERRTA
A0A0D0YPW0/2-128           SSDLTWLLVRNWNSFQVKGG-HGPVFSKEKGNLLNKSAHKYSGLANSKVVSIHPSAAGGITITKI-KADAKPNQVVSARSHVALKRS-TGPRRANKIAAAETAGKGYRADLRAVAVARTSALLRAERRTA
A0A0D0TJX6/2-128           SSDLTWLLVRNWNSFQVKGG-HGPVFSKEKGNLLNKSAHKYSGLANSKVVSIHPSAAGGITITKI-KADAKPNQVVSARSHVALKRS-TGPRRANKIAAAETAGKGYRADLRAVAVARTSALLRAERRTA
A0A225ZQQ6/2-128           SSDLTWLLVRNWNSFQVKGG-HGPVFSREKGNLLNKSAHKYSGLANSKVVSIHPSAAGGITITKI-KADAKPNQVVSARSHVTLKRS-TGPRRANKIAAAETAGKGYRADLRAVAVARTSALLRAERRTA
W2ICR5/3-123               SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLASTKAVDISLADKKVTLTTKIEKASKKPVK---AENAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
W2WCL2/3-123               SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLASTKAVDISLADKKVTLTTKIEKASKKPVK---AENAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
W2YML2/3-123               SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLASTKAVDISLADKKVTLTTKIEKASKKPVK---AENAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
V9EH49/3-123               SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLASTKAVDISLADKKVTLTTKIEKASKKPVK---AENAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
W2R356/3-123               SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLASTKAVDISLADKKVTLTTKIEKASKKPVK---AENAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
Q2M3Y8/3-123               SDTLTWLLTKNTSSFLVKRN--GNEFAREKFNLLNRNCRKYSGLASTKAVDISISDKKVTLTTKIEKATKKPAK---AQNAVPLR---KGARGGANTIRANISRNYYRRDLKKAALAKWSRLSTVAKVE-
F5HH08/2-128               SSDLTWLLVRNWNSFQVKGG-HGPVFSREKGNLLNKSAHKYSGLANSKVVSIHPSAAGGITITKI-KADAKPNQVASARSHVTLKRS-TGPRRANKIAAAETAGKGYRADLRAVAVARTSALLRAERRTA
A0A095CJU4/2-128           SSDLTWLLVRNWNSFQVKGG-HGPVFSKEKGNLLNKSAHKYSGLANSKVVSIHPSAAGGITITKI-KADAKPNQVVSARSHVALKRS-TGPRRANKIAAAETAGKGYRADLRAVAVARTSALLRAERRTA
A0A0D0WAN3/2-128           SSDLTWLLVRNWNSFQVKGG-HGPVFSKEKGNLLNKSAHKYSGLANSKVVSIHPSADGGITITKI-KADAKPNQVVSARSHVALKRS-TGPRRANKIAAAETAGKGYRADLRAVAVARTSALLRAERRTA
A0A226BM28/2-128           SSDLTWLLVRNWNSFQVKGG-HGPVFSREKGNLLNKSAHKYSGLANSKVVSIHPSAAGGITITKI-KADAKPNQVVSARSHVTLKRS-TGPRRANKIAAAETAGKGYRADLRAVAVARTSALLRAERRTA
J9VHC1/2-128               SSDLTWLLVRNWNSFQVKGG-HGPVFSREKGNLLNKSAHKYSGLANSKVVSIHPSAAGGITITKI-KADAKPNQVVSARSHVTLKRS-TGPRRANKIAAAETAGKDYRADLRAVAVARTSALLRAERRTA
#=GC scorecons             9559797957746964995501944966974997975558999975595757456445555597719845794621285649477120595956555556456564994996569677475745555451
#=GC scorecons_70          *__*****_**__**_**____*__*_***_*****___******__*_*_*__________***_**__**_____*___*_**____*_*_______*______**_**___*_**_*_*________
#=GC scorecons_80          *__*****__*__*__**____*__*__**_**_*____******__*_*_*__________**__**__**_____*___*_*_____*_*______________**_**___*_*__*_*________
#=GC scorecons_90          *__*_*_*_____*__**____*__*__*__**_*____*****___*______________*___**___*_____*___*_______*_*______________**_**___*_______________
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