# STOCKHOLM 1.0 #=GF ID 3.30.342.10/FF/000012 #=GF DE DNA polymerase epsilon catalytic subunit #=GF AC 3.30.342.10/FF/000012 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 77.359 #=GS A0A0P0VJF5/77-178_209-250 AC A0A0P0VJF5 #=GS A0A0P0VJF5/77-178_209-250 OS Oryza sativa Japonica Group #=GS A0A0P0VJF5/77-178_209-250 DE DNA polymerase epsilon catalytic subunit #=GS A0A0P0VJF5/77-178_209-250 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A8IDG4/83-174_248-284 AC A8IDG4 #=GS A8IDG4/83-174_248-284 OS Chlamydomonas reinhardtii #=GS A8IDG4/83-174_248-284 DE DNA polymerase epsilon catalytic subunit #=GS A8IDG4/83-174_248-284 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; #=GS A8XWD9/56-234 AC A8XWD9 #=GS A8XWD9/56-234 OS Caenorhabditis briggsae #=GS A8XWD9/56-234 DE DNA polymerase epsilon catalytic subunit #=GS A8XWD9/56-234 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS F0ZPX6/37-149_200-237 AC F0ZPX6 #=GS F0ZPX6/37-149_200-237 OS Dictyostelium purpureum #=GS F0ZPX6/37-149_200-237 DE DNA polymerase epsilon catalytic subunit #=GS F0ZPX6/37-149_200-237 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; #=GS H3FZP3/56-156_192-230 AC H3FZP3 #=GS H3FZP3/56-156_192-230 OS Pristionchus pacificus #=GS H3FZP3/56-156_192-230 DE DNA polymerase epsilon catalytic subunit #=GS H3FZP3/56-156_192-230 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A287F4V8/141-242_273-311 AC A0A287F4V8 #=GS A0A287F4V8/141-242_273-311 OS Hordeum vulgare subsp. vulgare #=GS A0A287F4V8/141-242_273-311 DE DNA polymerase epsilon catalytic subunit #=GS A0A287F4V8/141-242_273-311 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A0A1D6H8Z2/73-174_205-244 AC A0A1D6H8Z2 #=GS A0A1D6H8Z2/73-174_205-244 OS Zea mays #=GS A0A1D6H8Z2/73-174_205-244 DE DNA polymerase epsilon catalytic subunit #=GS A0A1D6H8Z2/73-174_205-244 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A452YAT4/46-147_178-216 AC A0A452YAT4 #=GS A0A452YAT4/46-147_178-216 OS Aegilops tauschii subsp. strangulata #=GS A0A452YAT4/46-147_178-216 DE DNA polymerase epsilon catalytic subunit #=GS A0A452YAT4/46-147_178-216 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; #=GS A0A0D3F5K4/77-178_220-261 AC A0A0D3F5K4 #=GS A0A0D3F5K4/77-178_220-261 OS Oryza barthii #=GS A0A0D3F5K4/77-178_220-261 DE DNA polymerase epsilon catalytic subunit #=GS A0A0D3F5K4/77-178_220-261 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS M8C197/144-252_283-320 AC M8C197 #=GS M8C197/144-252_283-320 OS Aegilops tauschii #=GS M8C197/144-252_283-320 DE DNA polymerase epsilon catalytic subunit #=GS M8C197/144-252_283-320 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; #=GS A0A287F502/140-241_272-310 AC A0A287F502 #=GS A0A287F502/140-241_272-310 OS Hordeum vulgare subsp. vulgare #=GS A0A287F502/140-241_272-310 DE DNA polymerase epsilon catalytic subunit #=GS A0A287F502/140-241_272-310 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A0A287F4Y6/4-106_137-175 AC A0A287F4Y6 #=GS A0A287F4Y6/4-106_137-175 OS Hordeum vulgare subsp. vulgare #=GS A0A287F4Y6/4-106_137-175 DE DNA polymerase epsilon catalytic subunit #=GS A0A287F4Y6/4-106_137-175 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A0A287F525/137-242_273-311 AC A0A287F525 #=GS A0A287F525/137-242_273-311 OS Hordeum vulgare subsp. vulgare #=GS A0A287F525/137-242_273-311 DE DNA polymerase epsilon catalytic subunit #=GS A0A287F525/137-242_273-311 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A0A452YAV3/47-148_179-217 AC A0A452YAV3 #=GS A0A452YAV3/47-148_179-217 OS Aegilops tauschii subsp. strangulata #=GS A0A452YAV3/47-148_179-217 DE DNA polymerase epsilon catalytic subunit #=GS A0A452YAV3/47-148_179-217 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; #=GS A0A452YAU3/44-145_176-214 AC A0A452YAU3 #=GS A0A452YAU3/44-145_176-214 OS Aegilops tauschii subsp. strangulata #=GS A0A452YAU3/44-145_176-214 DE DNA polymerase epsilon catalytic subunit #=GS A0A452YAU3/44-145_176-214 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; #=GS A0A287F4Z6/71-172_203-240 AC A0A287F4Z6 #=GS A0A287F4Z6/71-172_203-240 OS Hordeum vulgare subsp. vulgare #=GS A0A287F4Z6/71-172_203-240 DE DNA polymerase epsilon catalytic subunit #=GS A0A287F4Z6/71-172_203-240 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A0A452YAU4/69-170_201-238 AC A0A452YAU4 #=GS A0A452YAU4/69-170_201-238 OS Aegilops tauschii subsp. strangulata #=GS A0A452YAU4/69-170_201-238 DE DNA polymerase epsilon catalytic subunit #=GS A0A452YAU4/69-170_201-238 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; #=GS A0A0D3F5K3/77-178_220-261 AC A0A0D3F5K3 #=GS A0A0D3F5K3/77-178_220-261 OS Oryza barthii #=GS A0A0D3F5K3/77-178_220-261 DE DNA polymerase epsilon catalytic subunit #=GS A0A0D3F5K3/77-178_220-261 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS A0A452YAU1/46-147_178-216 AC A0A452YAU1 #=GS A0A452YAU1/46-147_178-216 OS Aegilops tauschii subsp. strangulata #=GS A0A452YAU1/46-147_178-216 DE DNA polymerase epsilon catalytic subunit #=GS A0A452YAU1/46-147_178-216 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Triticinae; Aegilops; Aegilops tauschii; Aegilops tauschii subsp. strangulata; #=GF SQ 19 A0A0P0VJF5/77-178_209-250 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKDKMELEVEAYLRRRYEGDIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLLHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSSDVLLH A8IDG4/83-174_248-284 -----------------------AS-GDGSMFKARLAFAPYFYVRVQEGREVEAENYLRRKCEGAVREVAVVEREDLDLKNHLSGIRRRLLRVSTYTVQQLMEVRKEVAPLVAAN-----------------------------------TEAFLEMREYDVPYHIRFAIDTDVRVGHWYTVRCHEGV---- A8XWD9/56-234 ----SELVDEQTKVIVSVVDYFFIS-DMDERFKISYPFRPYFYIATLDGFEFQVSSYLSKKY-GAQAQVEHMDKEDLDLKDHLSGLKKTYIKLSFTSTVEMMKIRKDLMPLVRKNTDRIKKESAYADYLARNLGGKGGSGTSDAQLNGDILNQIVDIREYDVPFHMRVSIDEKIFVGLWYDVKGV------- F0ZPX6/37-149_200-237 -----SSKDKELGIDKSSLELFFIQ-DDASSFRAWIPYNPYFYIYVKEGHQNEVESYLKKTYEKKIAGIDILEKEDLDLENHLSGLKKKYLKIRFHNVQTLMAIRNDIFPIIKKN----KQK----------------------------TEYILDIREYDVPYYVRAAIDLNIRVGLWYTVSKSSQSS--- H3FZP3/56-156_192-230 ------MVDEHTKVILSAVDFYFLE-ESGKRLKITYPFRPYFYIAIADNFDLQAAAYLTKKY--NFIHVEHLEKEDLDLKNHLSGLRAKYIKLSFPSTAELQKVKKDLMPLTK----------------------------------------FIDMREHDVPLDCRVSIDEKIFVGKWYSIVGMGKDR--- A0A287F4V8/141-242_273-311 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSDV--- A0A1D6H8Z2/73-174_205-244 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFRPYFYAATKDKMELEVEAYIRRRYEGEISDIEIIEKEDLDLKNHLSGLKRKYLKLQFDTVQQLMRVRNDLLHI----------------------------------------NYIIDLREYDVPYHVRFAIDNDVRSGQWYNVNVSGSDVL-- A0A452YAT4/46-147_178-216 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSDV--- A0A0D3F5K4/77-178_220-261 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKDKMELEVEAYLRRRYEGDIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLLHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSSDVLLH M8C197/144-252_283-320 CLIQSSWEDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSD---- A0A287F502/140-241_272-310 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSDV--- A0A287F4Y6/4-106_137-175 -------EDEDTGKIYSCVDLYFVSQQDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSDV--- A0A287F525/137-242_273-311 ---QSSWEDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSDV--- A0A452YAV3/47-148_179-217 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSDV--- A0A452YAU3/44-145_176-214 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSDV--- A0A287F4Z6/71-172_203-240 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSD---- A0A452YAU4/69-170_201-238 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSD---- A0A0D3F5K3/77-178_220-261 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKDKMELEVEAYLRRRYEGDIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLLHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSSDVLLH A0A452YAU1/46-147_178-216 -------EDEDTGKIYSCVDLYFVS-QDGSTFKVKYKFPPYFYAATKEKTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDLMHI----------------------------------------NCIIDLREYDVPYHVRFAIDNDVRSGQWYNVGVSGSDV--- #=GC scorecons 000000036545435363664565605566478546484999956547537576659857674545557655889999977999977667786574565577578487556000000000000000000000000000000000000000053668699899967595699457549499483344341000 #=GC scorecons_70 ________*_______*_____*_*___*__**____*_****____*__*_**__**_*_*______**__********************__*__*__**_**_**__*__________________________________________***_********_*_***__*__*_**_*__________ #=GC scorecons_80 _______________________________**____*_****_______*_____**___*__________***************__*_*__*_____**_**_*________________________________________________*_******___*__**_____*_**_*__________ #=GC scorecons_90 ________________________________*____*_****_____________**_______________******__****______*____________*_*________________________________________________*_******___*__**_____*_**_*__________ //