# STOCKHOLM 1.0
#=GF ID 3.30.310.130/FF/000007
#=GF DE polyhomeotic-proximal chromatin protein isoform X2
#=GF AC 3.30.310.130/FF/000007
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 79.562
#=GS Q9VRY4/1558-1612      AC Q9VRY4
#=GS Q9VRY4/1558-1612      OS Drosophila melanogaster
#=GS Q9VRY4/1558-1612      DE LD13895p
#=GS Q9VRY4/1558-1612      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VRY4/1558-1612      DR GO; GO:0005634; GO:0007411; GO:0016926; GO:0021952; GO:0060548; GO:0060997; GO:0070140; 
#=GS Q8MR14/436-490        AC Q8MR14
#=GS Q8MR14/436-490        OS Drosophila melanogaster
#=GS Q8MR14/436-490        DE LD44235p
#=GS Q8MR14/436-490        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q8MR14/436-490        DR GO; GO:0005634; GO:0007411; GO:0016926; GO:0021952; GO:0060548; GO:0060997; GO:0070140; 
#=GS T1FRV6/922-987        AC T1FRV6
#=GS T1FRV6/922-987        OS Helobdella robusta
#=GS T1FRV6/922-987        DE Uncharacterized protein
#=GS T1FRV6/922-987        DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS W4YB42/713-769        AC W4YB42
#=GS W4YB42/713-769        OS Strongylocentrotus purpuratus
#=GS W4YB42/713-769        DE Uncharacterized protein
#=GS W4YB42/713-769        DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS Q7PNN3/1731-1786      AC Q7PNN3
#=GS Q7PNN3/1731-1786      OS Anopheles gambiae
#=GS Q7PNN3/1731-1786      DE AGAP005881-PA
#=GS Q7PNN3/1731-1786      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS T1EKR4/1-51           AC T1EKR4
#=GS T1EKR4/1-51           OS Helobdella robusta
#=GS T1EKR4/1-51           DE Uncharacterized protein
#=GS T1EKR4/1-51           DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS C3ZM73/921-974        AC C3ZM73
#=GS C3ZM73/921-974        OS Branchiostoma floridae
#=GS C3ZM73/921-974        DE Uncharacterized protein
#=GS C3ZM73/921-974        DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS A0A182I244/1446-1501  AC A0A182I244
#=GS A0A182I244/1446-1501  OS Anopheles arabiensis
#=GS A0A182I244/1446-1501  DE Uncharacterized protein
#=GS A0A182I244/1446-1501  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles arabiensis; 
#=GS A0A182JSY7/1560-1615  AC A0A182JSY7
#=GS A0A182JSY7/1560-1615  OS Anopheles christyi
#=GS A0A182JSY7/1560-1615  DE Uncharacterized protein
#=GS A0A182JSY7/1560-1615  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles christyi; 
#=GS A0A182UE68/1076-1131  AC A0A182UE68
#=GS A0A182UE68/1076-1131  OS Anopheles melas
#=GS A0A182UE68/1076-1131  DE Uncharacterized protein
#=GS A0A182UE68/1076-1131  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles melas; 
#=GS A0A0M4F0S6/1210-1264  AC A0A0M4F0S6
#=GS A0A0M4F0S6/1210-1264  OS Drosophila busckii
#=GS A0A0M4F0S6/1210-1264  DE CG10107
#=GS A0A0M4F0S6/1210-1264  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS A0A1W4UXC2/1541-1595  AC A0A1W4UXC2
#=GS A0A1W4UXC2/1541-1595  OS Drosophila ficusphila
#=GS A0A1W4UXC2/1541-1595  DE polyhomeotic-proximal chromatin protein isoform X1
#=GS A0A1W4UXC2/1541-1595  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A1W4UXC7/435-489    AC A0A1W4UXC7
#=GS A0A1W4UXC7/435-489    OS Drosophila ficusphila
#=GS A0A1W4UXC7/435-489    DE uncharacterized protein LOC108093162 isoform X4
#=GS A0A1W4UXC7/435-489    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS Q29DR9/914-969        AC Q29DR9
#=GS Q29DR9/914-969        OS Drosophila pseudoobscura pseudoobscura
#=GS Q29DR9/914-969        DE Uncharacterized protein, isoform E
#=GS Q29DR9/914-969        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A3B0JZV5/1558-1611  AC A0A3B0JZV5
#=GS A0A3B0JZV5/1558-1611  OS Drosophila guanche
#=GS A0A3B0JZV5/1558-1611  DE Blast:Sentrin-specific protease 7
#=GS A0A3B0JZV5/1558-1611  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS A0A1W4V991/1531-1585  AC A0A1W4V991
#=GS A0A1W4V991/1531-1585  OS Drosophila ficusphila
#=GS A0A1W4V991/1531-1585  DE polyhomeotic-proximal chromatin protein isoform X3
#=GS A0A1W4V991/1531-1585  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0Q9X1K9/455-508    AC A0A0Q9X1K9
#=GS A0A0Q9X1K9/455-508    OS Drosophila willistoni
#=GS A0A0Q9X1K9/455-508    DE Uncharacterized protein
#=GS A0A0Q9X1K9/455-508    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS A0A1W4UWY2/1540-1594  AC A0A1W4UWY2
#=GS A0A1W4UWY2/1540-1594  OS Drosophila ficusphila
#=GS A0A1W4UWY2/1540-1594  DE polyhomeotic-proximal chromatin protein isoform X2
#=GS A0A1W4UWY2/1540-1594  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0Q5U2Z8/436-490    AC A0A0Q5U2Z8
#=GS A0A0Q5U2Z8/436-490    OS Drosophila erecta
#=GS A0A0Q5U2Z8/436-490    DE Uncharacterized protein, isoform B
#=GS A0A0Q5U2Z8/436-490    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B3NFM3/1553-1607      AC B3NFM3
#=GS B3NFM3/1553-1607      OS Drosophila erecta
#=GS B3NFM3/1553-1607      DE Uncharacterized protein, isoform A
#=GS B3NFM3/1553-1607      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS A0A0J9RRN1/1561-1615  AC A0A0J9RRN1
#=GS A0A0J9RRN1/1561-1615  OS Drosophila simulans
#=GS A0A0J9RRN1/1561-1615  DE Uncharacterized protein
#=GS A0A0J9RRN1/1561-1615  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GF SQ 21
Q9VRY4/1558-1612              ----PAVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHVFNKDNMPGHC
Q8MR14/436-490                ----PAVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHVFNKDNMPGHC
T1FRV6/922-987                T--DDTIKCPLIIVLDSLAGGKPRWDVSTILREYLQVEWNLKKRDGPGGVKGMDGEKIFHKMSMKGCV
W4YB42/713-769                VGEHKHFKQPCILVFDSLAGPP-RRNVIAKLRDYLTIEWEKRKEGKC----------EFTTANMKGMN
Q7PNN3/1731-1786              ---RPPIKQPCILIFDSLTGAS-RSRVVATLRDYLTCEYRVKMPDKP--------AKQFNKLNMPGHC
T1EKR4/1-51                   ---------PCILIFDSLKGDN-RYDVVNILRQYLQVEWNLKKRD-------VEGERVFDRISMKGSM
C3ZM73/921-974                ---MSIRRRPCILLFDSLRGPR-RAHVMKNLKEYLTVEWEVRKKDQP--------KREFT--NMKGAN
A0A182I244/1446-1501          ---RPPIKQPCILIFDSLTGAS-RSRVVATLRDYLTCEYRAKMPDKP--------AKQFNKLNMPGHC
A0A182JSY7/1560-1615          ---RPPIKQPCILIFDSLTGAS-RSRVVATLRDYLTCEYRAKMPDKP--------PKQFNKLNMPGHC
A0A182UE68/1076-1131          ---RPPIKQPCILIFDSLTGAS-RSRVVATLRDYLTCEYRAKMPDKP--------AKQFNKLNMPGHC
A0A0M4F0S6/1210-1264          ----PPVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHVFNKDNMPGHC
A0A1W4UXC2/1541-1595          ----PAVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHVFNKDNMPGHC
A0A1W4UXC7/435-489            ----PAVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHVFNKDNMPGHC
Q29DR9/914-969                ---VPAVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHVFNKDNMPGHC
A0A3B0JZV5/1558-1611          -----AVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRIKKPDAQ--------AHVFNKDNMPGHC
A0A1W4V991/1531-1585          ----PAVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHVFNKDNMPGHC
A0A0Q9X1K9/455-508            -----AVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHIFNKDNMPGHC
A0A1W4UWY2/1540-1594          ----PAVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHVFNKDNMPGHC
A0A0Q5U2Z8/436-490            ----PAVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHIFNKDNMPGHC
B3NFM3/1553-1607              ----PAVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHIFNKDNMPGHC
A0A0J9RRN1/1561-1615          ----PAVKQPLILIFDSLAGAS-RSRVVATLRDYLTCEYRVKKPDAQ--------AHVFNKDNMPGHC
#=GC scorecons                00003346494976799959550945965598699649554764733000000004449552695944
#=GC scorecons_70             _______*_*_*******_*___*__*___******_*___**_*_____________*___**_*__
#=GC scorecons_80             _________*_**_****_*___*__*___**_**__*___*__*_____________*____*_*__
#=GC scorecons_90             _________*_*___***_*___*__*___**_**__*____________________*____*_*__
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