# STOCKHOLM 1.0
#=GF ID 3.30.230.70/FF/000047
#=GF DE Exosome complex exonuclease RRP41A
#=GF AC 3.30.230.70/FF/000047
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 88.387
#=GS Q95Z13/4-240      AC Q95Z13
#=GS Q95Z13/4-240      OS Trypanosoma brucei
#=GS Q95Z13/4-240      DE Rrp41p homologue
#=GS Q95Z13/4-240      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; 
#=GS Q95Z13/4-240      DR GO; GO:0000178; GO:0005634; GO:0005737; GO:0006364; GO:0031981; GO:0097014; 
#=GS Q38AL8/4-240      AC Q38AL8
#=GS Q38AL8/4-240      OS Trypanosoma brucei brucei TREU927
#=GS Q38AL8/4-240      DE Exosome complex exonuclease RRP41A
#=GS Q38AL8/4-240      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q38AL8/4-240      DR GO; GO:0005634; GO:0005737; GO:0006364; GO:0031981; GO:0097014; 
#=GS Q4Q1B7/1-243      AC Q4Q1B7
#=GS Q4Q1B7/1-243      OS Leishmania major
#=GS Q4Q1B7/1-243      DE Putative exosome complex exonuclease rrp41
#=GS Q4Q1B7/1-243      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q4Q1B7/1-243      DR GO; GO:0006364; 
#=GS A2DCK7/4-236      AC A2DCK7
#=GS A2DCK7/4-236      OS Trichomonas vaginalis
#=GS A2DCK7/4-236      DE 3' exoribonuclease family, domain 1 containing protein
#=GS A2DCK7/4-236      DR ORG; Eukaryota; Trichomonadida; Trichomonadidae; Trichomonas; Trichomonas vaginalis; 
#=GS A0D7C7/2-226      AC A0D7C7
#=GS A0D7C7/2-226      OS Paramecium tetraurelia
#=GS A0D7C7/2-226      DE Uncharacterized protein
#=GS A0D7C7/2-226      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS A0A1G4IJF5/4-240  AC A0A1G4IJF5
#=GS A0A1G4IJF5/4-240  OS Trypanosoma equiperdum
#=GS A0A1G4IJF5/4-240  DE Exosome complex exonuclease RRP41A
#=GS A0A1G4IJF5/4-240  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS A4ID90/1-243      AC A4ID90
#=GS A4ID90/1-243      OS Leishmania infantum
#=GS A4ID90/1-243      DE Exosome_complex_exonuclease_RRP41A
#=GS A4ID90/1-243      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS E9AT80/1-243      AC E9AT80
#=GS E9AT80/1-243      OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AT80/1-243      DE Putative exosome complex exonuclease rrp41
#=GS E9AT80/1-243      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS A0A3S7XB24/1-243  AC A0A3S7XB24
#=GS A0A3S7XB24/1-243  OS Leishmania donovani
#=GS A0A3S7XB24/1-243  DE Exosome complex exonuclease RRP41A
#=GS A0A3S7XB24/1-243  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS E9BU26/1-243      AC E9BU26
#=GS E9BU26/1-243      OS Leishmania donovani BPK282A1
#=GS E9BU26/1-243      DE Exosome complex exonuclease rrp41, putative
#=GS E9BU26/1-243      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GF SQ 10
Q95Z13/4-240              I---KEYINPAGLRLDGRRQNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVSNRLDGKYNEVTITCDVVVAAFAGERRREQQRYSRLSEDISASVLDVARSVVLLSQYPNSQIHICIEVLKQDGSDKAACINAACLALIDASIAMRDVVYTQTVGLIEGFDVVDLTTEEIHSQCPSICITVQGHDPTNIVWMESNSRLAPEVITRLVKVAQKASTDVFETALR----GPLEEHAAT---
Q38AL8/4-240              I---KEYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVSNRLEGKYNEVTITCDVVVAAFAGERRREQQRYSRLSEDISASVLDVARSVVLLSQYPNSQIHICIEVLKQDGSDKAACINAACLALIDASIAMKDVVYTQTVGLIEGFDVVDLTTEEIHSQCPSICITVQGHDPTNIVWMESNSRLAPEVITRLVKVAQKASTDVFETALR----GPLEEHAAT---
Q4Q1B7/1-243              MSRQKEYVSPAGLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRESLHKQEAKHDKGLVTCEVAVAAFAGENRRNPQRRSKLSEDIGAAVVQVARSVILLSQYPNSQIHIYIEVLQQDGNEKIACVNAACLALIDANVAMRDAVCCIDAGILDEHMLIDLTSNELRSQCPVIAAAFTGHDTRNIIWLETASRLPPDSVTRLLKCAEEGATKLFEATMR----KALEEHAKKILT
A2DCK7/4-236              ------YNQFTGLRIDGRPPNEMRLVEAKIGTIPGCTGSSHFKIGQTEVIAQIFGPRDNR----SGDNAAEIRVTFEYADFAKVPHASDTSMTRRGRESEVIMKRTFEEAIKRELFPHSKILIAITVIQDDGSCQSAAINAATLALIDAGIPMFDFVVSMTVALYDDKCFLDAGRAESNARFPVLEVSIF-PSTSEILSMNLTARIEPQASKNLMAAAIDGCKELHAIMQDVVRVASMERYAQS---
A0D7C7/2-226              ----------SLKRQDGRNLQQMRNIEFKLAIDLSVDGSCLYKQGLTEVICLVQGPR-------AKTQSELLLIEYSVSPFSNIESKRSSKFDKDYSMFAENLKESFENLIILDENGKSEISISVCVIQNDGSSKSAVFNAITLALLDAGVSMKDFLVSVTVGLDQGNLIVDLTQEESKTAQGELTISYQSRKQKIDFYELKTLKLQQQEMDQLSKLAVSKADEIYQWMKE----EIYQIKQKQI-D
A0A1G4IJF5/4-240          I---KEYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVSNRLEGKYNEVTITCDVVVAAFAGERRREQQRYSRLSEDISASVLDVARSVVLLSQYPNSQIHICIEVLKQDGSDKAACINAACLALIDASIAMKDVVYTQTVGLIEGFDVVDLTTEEIHSQCPSICITVQGHDPTNIVWMESNSRLAPEVITRLVKVAQKASTDVFETALR----GPLEEHAAT---
A4ID90/1-243              MSRQKEYVSPAGLRLDGRRPLEARRMDIAFSTLSACDGSCDITLGQSKVCACVFGPRESLHKQEAKHDKGLVTCEVAVAAFAGENRRNPQRRSKLSEDIGAAVVQVARSVILLSQYPNSQIHIYIEVLQKDGNEKIACVNAACLALIDANVAMRDAVCCIDAGILDEHMLIDLTNDELRSQCPVIAAAFTGHDTRNIIWLETASRLPPDSAARLLKCAEEGATKLFETAMR----KALEEHAKKILT
E9AT80/1-243              MSRQKEYVSPAGLRLDGRRPREARRMDIAFGTLSACDGSCDITLGQSKVCASVFGPRESLHKQEAKHDKALVTCEVAVAAFAGENRRNPQRRSRLSEDIGAAVVQVARSVILLSQYPNSQIHIYIEVLQQDGNEKIACINAACLALIDANVAMRDAVCCIDAGILDEHMLIDLTNDELRSQCPVIAAAFTGHDTRNIIWLETTSRLPPDSATRLLKCAEEGATKLFETTMR----KALEEHARKILA
A0A3S7XB24/1-243          MSRQKEYVSPAGLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRESLHKQEAKHDKGLVTCEVAVAAFAGENRRNPQRRSKLSEDIGAAVVQVARSVILLSQYPNSQIHIYIEVLQKDGNEKIACVNAACLALIDANVAMRDAVCCIDAGILDEHMLIDLTNDELRSQCPVIAAAFTGHDTRNIIWLETASRLPPDSAARLLKCAEEGATKLFETAMR----KALEEHAKKILT
E9BU26/1-243              MSRQKEYVSPAGLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRESLHKQEAKHDKGLVTCEVAVAAFAGENRRNPQRRSKLSEDIGAAVVQVARSVILLSQYPNSQIHIYIEVLQKDGNEKIACVNAACLALIDANVAMRDAVCCIDAGILDEHMLIDLTNDELRSQCPVIAAAFTGHDTRNIIWLETASRLPPDSAARLLKCAEEGATKLFETAMR----KALEEHAKKILT
#=GC scorecons            2111335334566959995637494544456445566967343394649563759995222223564533465555367597543554355356455554546345455575655565969494749664996474955996599979946594947444567635533469673594455464635543455545654443557736534459463934455556544350000445746643211
#=GC scorecons_70         ____________**_***___*_*______*____*****____*___*_*_*_***________*___________**_**___________*________________*_*___*_*_*_*_*_***_**__*_*__***_******_*_*_*_*_____**_______***__*_____*_*___________*_______**_*_____*_*_*_______*____________*__*_____
#=GC scorecons_80         _____________*_***___*_*_____________*_*____*___*___*_***_______________________*_____________________________*_______*_*_*_*_*___**__*_*__**__******___*_*_*_____*________*____*___________________________**_______*___*____________________*________
#=GC scorecons_90         _____________*_***_____*_____________*______*___*_____***_______________________*_____________________________________*_*_*___*___**____*__**__***_**___*_*________________*____*____________________________________*___*_____________________________
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