# STOCKHOLM 1.0
#=GF ID 3.30.2230.10/FF/000008
#=GF DE Ubiquitin carboxyl-terminal hydrolase 11
#=GF AC 3.30.2230.10/FF/000008
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 38.636
#=GS 4melB01/1-120      AC P51784
#=GS 4melB01/1-120      OS Homo sapiens
#=GS 4melB01/1-120      DE Ubiquitin carboxyl-terminal hydrolase 11
#=GS 4melB01/1-120      DR CATH; 4mel; B:32-142; 
#=GS 4melB01/1-120      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 4melB01/1-120      DR GO; GO:0004197; GO:0004843; GO:0005515; GO:0005634; GO:0005654; GO:0005829; GO:0016579; GO:0036459; 
#=GS 4melB01/1-120      DR EC; 3.4.19.12; 
#=GS Q99K46/18-144      AC Q99K46
#=GS Q99K46/18-144      OS Mus musculus
#=GS Q99K46/18-144      DE Ubiquitin carboxyl-terminal hydrolase 11
#=GS Q99K46/18-144      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q99K46/18-144      DR GO; GO:0004843; GO:0005634; GO:0005654; GO:0005829; GO:0016579; 
#=GS Q99K46/18-144      DR EC; 3.4.19.12; 
#=GS G5E9A6/23-151      AC G5E9A6
#=GS G5E9A6/23-151      OS Homo sapiens
#=GS G5E9A6/23-151      DE Ubiquitin carboxyl-terminal hydrolase 11
#=GS G5E9A6/23-151      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS G5E9A6/23-151      DR GO; GO:0005654; GO:0005829; 
#=GS Q5D006/18-144      AC Q5D006
#=GS Q5D006/18-144      OS Rattus norvegicus
#=GS Q5D006/18-144      DE Ubiquitin carboxyl-terminal hydrolase 11
#=GS Q5D006/18-144      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS Q5D006/18-144      DR GO; GO:0004197; GO:0005634; GO:0006511; 
#=GS Q5D006/18-144      DR EC; 3.4.19.12; 
#=GS 4melA01/1-120      AC P51784
#=GS 4melA01/1-120      OS Homo sapiens
#=GS 4melA01/1-120      DE Ubiquitin carboxyl-terminal hydrolase 11
#=GS 4melA01/1-120      DR CATH; 4mel; A:32-142; 
#=GS 4melA01/1-120      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 4melA01/1-120      DR GO; GO:0004197; GO:0004843; GO:0005515; GO:0005634; GO:0005654; GO:0005829; GO:0016579; GO:0036459; 
#=GS 4melA01/1-120      DR EC; 3.4.19.12; 
#=GS P51784/66-194      AC P51784
#=GS P51784/66-194      OS Homo sapiens
#=GS P51784/66-194      DE Ubiquitin carboxyl-terminal hydrolase 11
#=GS P51784/66-194      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS P51784/66-194      DR GO; GO:0004197; GO:0004843; GO:0005515; GO:0005634; GO:0005654; GO:0005829; GO:0016579; GO:0036459; 
#=GS P51784/66-194      DR EC; 3.4.19.12; 
#=GS A0A2K5E8Y6/21-149  AC A0A2K5E8Y6
#=GS A0A2K5E8Y6/21-149  OS Aotus nancymaae
#=GS A0A2K5E8Y6/21-149  DE Uncharacterized protein
#=GS A0A2K5E8Y6/21-149  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS A0A2K6N6T2/64-192  AC A0A2K6N6T2
#=GS A0A2K6N6T2/64-192  OS Rhinopithecus bieti
#=GS A0A2K6N6T2/64-192  DE Uncharacterized protein
#=GS A0A2K6N6T2/64-192  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus bieti; 
#=GS A0A2K5RWP4/75-203  AC A0A2K5RWP4
#=GS A0A2K5RWP4/75-203  OS Cebus capucinus imitator
#=GS A0A2K5RWP4/75-203  DE Uncharacterized protein
#=GS A0A2K5RWP4/75-203  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS A0A2K6UPA7/28-155  AC A0A2K6UPA7
#=GS A0A2K6UPA7/28-155  OS Saimiri boliviensis boliviensis
#=GS A0A2K6UPA7/28-155  DE Ubiquitin specific peptidase 11
#=GS A0A2K6UPA7/28-155  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Saimiriinae; Saimiri; Saimiri boliviensis; Saimiri boliviensis boliviensis; 
#=GS F7IS60/29-157      AC F7IS60
#=GS F7IS60/29-157      OS Callithrix jacchus
#=GS F7IS60/29-157      DE Ubiquitin specific peptidase 11
#=GS F7IS60/29-157      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS A0A2I3G364/66-194  AC A0A2I3G364
#=GS A0A2I3G364/66-194  OS Nomascus leucogenys
#=GS A0A2I3G364/66-194  DE Uncharacterized protein
#=GS A0A2I3G364/66-194  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS H2PVG0/66-194      AC H2PVG0
#=GS H2PVG0/66-194      OS Pongo abelii
#=GS H2PVG0/66-194      DE Ubiquitin specific peptidase 11
#=GS H2PVG0/66-194      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS A0A2I2YAR1/66-194  AC A0A2I2YAR1
#=GS A0A2I2YAR1/66-194  OS Gorilla gorilla gorilla
#=GS A0A2I2YAR1/66-194  DE Ubiquitin specific peptidase 11
#=GS A0A2I2YAR1/66-194  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2I3SX49/66-194  AC A0A2I3SX49
#=GS A0A2I3SX49/66-194  OS Pan troglodytes
#=GS A0A2I3SX49/66-194  DE USP11 isoform 2
#=GS A0A2I3SX49/66-194  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2K6Q6A8/22-149  AC A0A2K6Q6A8
#=GS A0A2K6Q6A8/22-149  OS Rhinopithecus roxellana
#=GS A0A2K6Q6A8/22-149  DE Uncharacterized protein
#=GS A0A2K6Q6A8/22-149  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Colobinae; Rhinopithecus; Rhinopithecus roxellana; 
#=GS A0A2K5E8U4/41-169  AC A0A2K5E8U4
#=GS A0A2K5E8U4/41-169  OS Aotus nancymaae
#=GS A0A2K5E8U4/41-169  DE Uncharacterized protein
#=GS A0A2K5E8U4/41-169  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS A0A2K5E8R0/21-149  AC A0A2K5E8R0
#=GS A0A2K5E8R0/21-149  OS Aotus nancymaae
#=GS A0A2K5E8R0/21-149  DE Uncharacterized protein
#=GS A0A2K5E8R0/21-149  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS H2PVG1/34-162      AC H2PVG1
#=GS H2PVG1/34-162      OS Pongo abelii
#=GS H2PVG1/34-162      DE Ubiquitin specific peptidase 11
#=GS H2PVG1/34-162      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GF SQ 19
4melB01/1-120              MDREPQHEELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFQDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIE----------
Q99K46/18-144              EDRDTQPEAMPDLDEQWRQIGN---GRERPLRAGESWFLVEKHWYKQWEVYVKGGDQDASTFPGCINNAGLFEDQISWHLRERLLEGDDYVLLPAPAWNYMVSWYGLMDGQPPIERKVIELPGIRKVEVY
G5E9A6/23-151              EDREPQHEELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFQDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIELPNIQKVEV-
Q5D006/18-144              EDRETQPEAMPDLDQQWRQIGN---GRERPLRAGESWFLVEKHWYKQWEAYVKGGDQDASTFPGSINNSGLFEDQISWHLRERLVEGDDYVLLPAPAWNYLVSWYGLKDDQPPIERKVIELPGIRKVEVY
4melA01/1-120              MDREPQHEELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFQDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIE----------
P51784/66-194              EDREPQHEELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFQDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIELPNIQKVEV-
A0A2K5E8Y6/21-149          EDREPKREELPGLDNQWRQIENSESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFEDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEDGQPPIERKVIELSNIRKVEV-
A0A2K6N6T2/64-192          EDREPQRKELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNAALFQDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIELPNIQKVEV-
A0A2K5RWP4/75-203          EDREPQREELPGLDNQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSGTFPGCINNATLFEDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEDGQPPIERKVIELSNIRKVEV-
A0A2K6UPA7/28-155          -DREPQRGELPGLDNQWRQIENGENGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSGTFPGCINNAPLFEDETNWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLENGQPPIERKVIELSNIRKVEV-
F7IS60/29-157              EDREPKREELPGLDNQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSGTFPGCINNAVLFEDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEDGQPPIERKVIELSNIRKVEV-
A0A2I3G364/66-194          EDREPQHEELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFQDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIELPNIQKVEV-
H2PVG0/66-194              EDKEPQHEELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFQDEINWRLKEGLVEGEDYVLLPAAAWHDMVSWYGLEHGQPPIERKVIELPNIQKVEV-
A0A2I2YAR1/66-194          EDREPQHEELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFQDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIELPNIQKVEV-
A0A2I3SX49/66-194          EDREPQHKELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFQDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIELPNIQKVEV-
A0A2K6Q6A8/22-149          -NREPQRKELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNAALFQDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEHGQPPIERKVIELPNIQKVEV-
A0A2K5E8U4/41-169          EDREPKREELPGLDNQWRQIENSESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFEDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEDGQPPIERKVIELSNIRKVEV-
A0A2K5E8R0/21-149          EDREPKREELPGLDNQWRQIENSESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFEDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLEDGQPPIERKVIELSNIRKVEV-
H2PVG1/34-162              EDKEPQHEELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQDSSTFPGCINNATLFQDEINWRLKEGLVEGEDYVLLPAAAWHDMVSWYGLEHGQPPIERKVIELPNIQKVEV-
#=GC scorecons             5888675767969949999969454999999999999999999999999799799999679999799975996978697979697997999999969967799999965799999999996446466660
#=GC scorecons_70          _*****_*******_*******___********************************************_*************************************__************__*_****_
#=GC scorecons_80          _***_*_*_**_**_*****_*___***************************_*****_**********_**_*_*_*_***_************_**_********__***********__________
#=GC scorecons_90          _***______*_**_*****_*___************************_**_*****__****_***__**_*_*_*_*_*_*_**_*******_**___******___**********__________
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