# STOCKHOLM 1.0
#=GF ID 3.30.2230.10/FF/000013
#=GF DE Ubiquitin carboxyl-terminal hydrolase cyk-3
#=GF AC 3.30.2230.10/FF/000013
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 56.569
#=GS Q8WT44/293-414          AC Q8WT44
#=GS Q8WT44/293-414          OS Caenorhabditis elegans
#=GS Q8WT44/293-414          DE Ubiquitin carboxyl-terminal hydrolase cyk-3
#=GS Q8WT44/293-414          DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q8WT44/293-414          DR GO; GO:0004843; GO:0005737; GO:0005815; GO:0009792; GO:0009992; GO:0016579; GO:0030010; GO:0031023; GO:1903673; GO:1904785; GO:2000251; 
#=GS Q8WT44/293-414          DR EC; 3.4.19.12; 
#=GS H3DY57/299-368_414-464  AC H3DY57
#=GS H3DY57/299-368_414-464  OS Pristionchus pacificus
#=GS H3DY57/299-368_414-464  DE Uncharacterized protein
#=GS H3DY57/299-368_414-464  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Diplogasteromorpha; Diplogasteroidea; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; 
#=GS E3NH01/294-415          AC E3NH01
#=GS E3NH01/294-415          OS Caenorhabditis remanei
#=GS E3NH01/294-415          DE CRE-CYK-3 protein
#=GS E3NH01/294-415          DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A8X800/308-423          AC A8X800
#=GS A8X800/308-423          OS Caenorhabditis briggsae
#=GS A8X800/308-423          DE Protein CBR-CYK-3
#=GS A8X800/308-423          DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A0A2G5URR4/294-412      AC A0A2G5URR4
#=GS A0A2G5URR4/294-412      OS Caenorhabditis nigoni
#=GS A0A2G5URR4/294-412      DE Uncharacterized protein
#=GS A0A2G5URR4/294-412      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GS A0A261BH36/295-409      AC A0A261BH36
#=GS A0A261BH36/295-409      OS Caenorhabditis latens
#=GS A0A261BH36/295-409      DE Uncharacterized protein
#=GS A0A261BH36/295-409      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis latens; 
#=GS A0A2G5USL9/294-409      AC A0A2G5USL9
#=GS A0A2G5USL9/294-409      OS Caenorhabditis nigoni
#=GS A0A2G5USL9/294-409      DE Uncharacterized protein
#=GS A0A2G5USL9/294-409      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni; 
#=GF SQ 7
Q8WT44/293-414                  LRPESRKMELQIVNEFEKRASELPLS---EWNIVASGWHAELRSFL---------EADKNPNPIDNSGIKGTREDSWTSK---VACISAESARLKPDLIPSDYIRVPVPLWRAWLRWHGCALTVDSQFTRKYLDGEF-
H3DY57/299-368_414-464          ----TPAIELEVVRGFVHRMDRMGASLPTECNILSAVWYREWETRLTRAAAAPPMEKCEQPPPIDNSPLLANVDDFFIID---FCALK----------LLKEWLAIPRVLWSALVRWHGLMRPSDEIVRRRLPHGRCP
E3NH01/294-415                  LRPESRKMELQIVNEFEARASILPLT---EWNIVSSGWHSEFRTLL---------EADKSPMPIDNSGIKGTREDSWTSR---VACISAESARLKPDLVPSDYIRVPVPLWRAWLRWHGCALTVDSQFTRKYLDGEF-
A8X800/308-423                  LRPESKKMELQVVNEFESRASELPLS---EWNIVASGWHSEYRTLL---------EAERTPNPIDNSGIKGTREDSWTSR---VACISAESARLKPDLLPMDYIRVPVPLWRAWLRWHGCALTVDSQFTRK-------
A0A2G5URR4/294-412              LRPESKKMELQIVNEFESRASELPLS---EWNIVASGWHSEYRTLL---------EAEKTPNPIDNTGIKGTREDSWTSRLLQVACISAESARLKPDLLPADYIRVPVPLWRAWLRWHGCALTVDSQFTRK-------
A0A261BH36/295-409              -RPESKKMELQIVNEFEARASILPLT---EWNIVASGWHSEFRTLL---------EADKSPMPIDNSGIKGTREDSWTSR---VACISAESARLKPDLVPSDYIRVPVPLWRAWLRWHGCALTVDSQFTRK-------
A0A2G5USL9/294-409              LRPESKKMELQIVNEFESRASELPLS---EWNIVASGWHSEYRTLL---------EAEKTPNPIDNTGIKGTREDSWTSR---VACISAESARLKPDLLPADYIRVPVPLWRAWLRWHGCALTVDSQFTRK-------
#=GC scorecons                  233354569966955943955365560009599655496493573900000000095353939999656455469455540005556533333333336536565694599594699994545595455960002000
#=GC scorecons_70               _______***_**__*__*___*__*___*_**____**_*__*_*_________*____*_*****______**__________________________*___**__**_*__****_____*____**_______
#=GC scorecons_80               ________**__*__*__*__________*_**____*__*__*_*_________*____*_****________*_______________________________*__**_*__****_____*____*________
#=GC scorecons_90               ________**__*__*__*__________*_**____*__*____*_________*____*_****________*_______________________________*__**_*__****_____*____*________
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