# STOCKHOLM 1.0
#=GF ID 3.30.160.20/FF/000086
#=GF DE double-stranded RNA-binding protein Staufen homolog 1 isoform X2
#=GF AC 3.30.160.20/FF/000086
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 26.999
#=GS A0A2R8Q731/63-142  AC A0A2R8Q731
#=GS A0A2R8Q731/63-142  OS Danio rerio
#=GS A0A2R8Q731/63-142  DE Staufen double-stranded RNA-binding protein 1
#=GS A0A2R8Q731/63-142  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A2R8Q731/63-142  DR GO; GO:0003723; GO:0007281; 
#=GS A0A3Q3DL61/64-144  AC A0A3Q3DL61
#=GS A0A3Q3DL61/64-144  OS Hippocampus comes
#=GS A0A3Q3DL61/64-144  DE Uncharacterized protein
#=GS A0A3Q3DL61/64-144  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampinae; Hippocampus; Hippocampus comes; 
#=GS A0A1A8U250/64-144  AC A0A1A8U250
#=GS A0A1A8U250/64-144  OS Nothobranchius furzeri
#=GS A0A1A8U250/64-144  DE Staufen, RNA binding protein, homolog 1
#=GS A0A1A8U250/64-144  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Euteleosteomorpha; Atherinomorphae; Cyprinodontiformes; Aplocheiloidei; Nothobranchiidae; Nothobranchius; Nothobranchius furzeri; 
#=GS A0A2D0S094/63-142  AC A0A2D0S094
#=GS A0A2D0S094/63-142  OS Ictalurus punctatus
#=GS A0A2D0S094/63-142  DE double-stranded RNA-binding protein Staufen homolog 1 isoform X3
#=GS A0A2D0S094/63-142  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Siluriformes; Siluroidei; Ictaluridae; Ictalurus; Ictalurus punctatus; 
#=GS A0A3B4BZ31/63-141  AC A0A3B4BZ31
#=GS A0A3B4BZ31/63-141  OS Pygocentrus nattereri
#=GS A0A3B4BZ31/63-141  DE Uncharacterized protein
#=GS A0A3B4BZ31/63-141  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Characiformes; Characoidei; Serrasalmidae; Pygocentrus; Pygocentrus nattereri; 
#=GS F1Q5V4/63-142      AC F1Q5V4
#=GS F1Q5V4/63-142      OS Danio rerio
#=GS F1Q5V4/63-142      DE Staufen double-stranded RNA-binding protein 1
#=GS F1Q5V4/63-142      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS F1Q5V4/63-142      DR GO; GO:0003723; GO:0007281; 
#=GS A0A2R8QEG8/63-142  AC A0A2R8QEG8
#=GS A0A2R8QEG8/63-142  OS Danio rerio
#=GS A0A2R8QEG8/63-142  DE Staufen double-stranded RNA-binding protein 1
#=GS A0A2R8QEG8/63-142  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS A0A2R8QEG8/63-142  DR GO; GO:0003723; GO:0007281; 
#=GS F1QTC1/1-76        AC F1QTC1
#=GS F1QTC1/1-76        OS Danio rerio
#=GS F1QTC1/1-76        DE Staufen double-stranded RNA-binding protein 1
#=GS F1QTC1/1-76        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS F1QTC1/1-76        DR GO; GO:0003723; GO:0007281; 
#=GS Q6P114/1-76        AC Q6P114
#=GS Q6P114/1-76        OS Danio rerio
#=GS Q6P114/1-76        DE Staufen, RNA binding protein, homolog 1 (Drosophila)
#=GS Q6P114/1-76        DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS Q6P114/1-76        DR GO; GO:0003723; GO:0007281; 
#=GS E9QIB8/63-142      AC E9QIB8
#=GS E9QIB8/63-142      OS Danio rerio
#=GS E9QIB8/63-142      DE Staufen double-stranded RNA-binding protein 1
#=GS E9QIB8/63-142      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; 
#=GS E9QIB8/63-142      DR GO; GO:0003723; GO:0007281; 
#=GS A0A2D0RYQ9/63-142  AC A0A2D0RYQ9
#=GS A0A2D0RYQ9/63-142  OS Ictalurus punctatus
#=GS A0A2D0RYQ9/63-142  DE double-stranded RNA-binding protein Staufen homolog 1 isoform X2
#=GS A0A2D0RYQ9/63-142  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Siluriformes; Siluroidei; Ictaluridae; Ictalurus; Ictalurus punctatus; 
#=GS A0A2D0RYQ2/63-142  AC A0A2D0RYQ2
#=GS A0A2D0RYQ2/63-142  OS Ictalurus punctatus
#=GS A0A2D0RYQ2/63-142  DE double-stranded RNA-binding protein Staufen homolog 1 isoform X1
#=GS A0A2D0RYQ2/63-142  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Siluriformes; Siluroidei; Ictaluridae; Ictalurus; Ictalurus punctatus; 
#=GS A0A2D0RYQ7/63-142  AC A0A2D0RYQ7
#=GS A0A2D0RYQ7/63-142  OS Ictalurus punctatus
#=GS A0A2D0RYQ7/63-142  DE double-stranded RNA-binding protein Staufen homolog 1 isoform X4
#=GS A0A2D0RYQ7/63-142  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Siluriformes; Siluroidei; Ictaluridae; Ictalurus; Ictalurus punctatus; 
#=GS A0A3B4BZ70/61-139  AC A0A3B4BZ70
#=GS A0A3B4BZ70/61-139  OS Pygocentrus nattereri
#=GS A0A3B4BZ70/61-139  DE Uncharacterized protein
#=GS A0A3B4BZ70/61-139  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Characiformes; Characoidei; Serrasalmidae; Pygocentrus; Pygocentrus nattereri; 
#=GF SQ 14
A0A2R8Q731/63-142          --TVSNMANPKEKTPMCLVNELARYNKIQPEYKLLSEEGPAHSKIFSVRLTLGDQHWDAEGTSIKKAQHSAASSALAQTTLP
A0A3Q3DL61/64-144          TITVSNMANPKEKTPMCLVNELARFNKLQPEYKLLSEQGPAHSKIFSVRLTLGDQHWDAEGTSIKKAQHSAATSALAETVL-
A0A1A8U250/64-144          -TTTVNMANPKEKTPMCLVNELARFNKLQPEYKLLSEQGPAHSKIFSVRLTLGDQHWEAEGTSIKKAQHSAAASALTETTLP
A0A2D0S094/63-142          --TASNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFTVQLTLGEQHWDAEGTSIKKAQHSAAACALTQTTLP
A0A3B4BZ31/63-141          --TVSNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFSVRLTLGEQHWDAEGTSIKKAQHSAAACALAQTGL-
F1Q5V4/63-142              --TVSNMANPKEKTPMCLVNELARYNKIQPEYKLLSEEGPAHSKIFSVRLTLGDQHWDAEGTSIKKAQHSAASSALAQTTLP
A0A2R8QEG8/63-142          --TVSNMANPKEKTPMCLVNELARYNKIQPEYKLLSEEGPAHSKIFSVRLTLGDQHWDAEGTSIKKAQHSAASSALAQTTLP
F1QTC1/1-76                ------MANPKEKTPMCLVNELARYNKIQPEYKLLSEEGPAHSKIFSVRLTLGDQHWDAEGTSIKKAQHSAASSALAQTTLP
Q6P114/1-76                ------MANPKEKTPMCLVNELARYNKIQPEYKLLSEEGPAHSKIFSVRLTLGDQHWDAEGTSIKKAQHSAASSALAQTTLP
E9QIB8/63-142              --TVSNMANPKEKTPMCLVNELARYNKIQPEYKLLSEEGPAHSKIFSVRLTLGDQHWDAEGTSIKKAQHSAASSALAQTTLP
A0A2D0RYQ9/63-142          --TASNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFTVQLTLGEQHWDAEGTSIKKAQHSAAACALTQTTLP
A0A2D0RYQ2/63-142          --TASNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFTVQLTLGEQHWDAEGTSIKKAQHSAAACALTQTTLP
A0A2D0RYQ7/63-142          --TASNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFTVQLTLGEQHWDAEGTSIKKAQHSAAACALTQTTLP
A0A3B4BZ70/61-139          --TVSNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFSVRLTLGEQHWDAEGTSIKKAQHSAAACALAQTGL-
#=GC scorecons             0053459999999999999999997997999999999699999999697999979998999999999999995699679694
#=GC scorecons_70          ______******************************************************************__*******_
#=GC scorecons_80          ______*******************************_********_*_****_******************__**_**_*_
#=GC scorecons_90          ______******************_**_*********_********_*_****_******************__**__*_*_
//