# STOCKHOLM 1.0 #=GF ID 3.30.160.20/FF/000073 #=GF DE Double-stranded RNA-binding protein Staufen homolog #=GF AC 3.30.160.20/FF/000073 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 64.164 #=GS P25159/299-382 AC P25159 #=GS P25159/299-382 OS Drosophila melanogaster #=GS P25159/299-382 DE Maternal effect protein staufen #=GS P25159/299-382 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS P25159/299-382 DR GO; GO:0000932; GO:0003723; GO:0003725; GO:0003729; GO:0003730; GO:0005515; GO:0005737; GO:0005938; GO:0006403; GO:0007315; GO:0007316; GO:0007317; GO:0007318; GO:0007400; GO:0007616; GO:0008017; GO:0008104; GO:0008298; GO:0008595; GO:0009925; GO:0010606; GO:0016324; GO:0035418; GO:0043025; GO:0045167; GO:0045177; GO:0045179; GO:0045180; GO:0045450; GO:0045451; GO:0045887; GO:0046011; GO:0046012; GO:0048477; GO:0055059; GO:0060293; GO:0071212; GO:0071598; GO:1990124; #=GS Q3L1C9/331-413 AC Q3L1C9 #=GS Q3L1C9/331-413 OS Aplysia californica #=GS Q3L1C9/331-413 DE Double-stranded RNA-binding protein Staufen homolog #=GS Q3L1C9/331-413 DR ORG; Eukaryota; Metazoa; Mollusca; Gastropoda; Heterobranchia; Aplysiida; Aplysioidea; Aplysiidae; Aplysia; Aplysia californica; #=GS Q3L1C9/331-413 DR GO; GO:0003729; GO:0032880; GO:0043005; GO:0043025; #=GS Q7ZW47/6-74 AC Q7ZW47 #=GS Q7ZW47/6-74 OS Danio rerio #=GS Q7ZW47/6-74 DE Double-stranded RNA-binding protein Staufen homolog 2 #=GS Q7ZW47/6-74 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS Q7ZW47/6-74 DR GO; GO:0007281; GO:0008354; #=GS E1JGK6/299-382 AC E1JGK6 #=GS E1JGK6/299-382 OS Drosophila melanogaster #=GS E1JGK6/299-382 DE Staufen, isoform C #=GS E1JGK6/299-382 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS A0A2D0PPH0/6-74 AC A0A2D0PPH0 #=GS A0A2D0PPH0/6-74 OS Ictalurus punctatus #=GS A0A2D0PPH0/6-74 DE double-stranded RNA-binding protein Staufen homolog 2 isoform X3 #=GS A0A2D0PPH0/6-74 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Siluriformes; Siluroidei; Ictaluridae; Ictalurus; Ictalurus punctatus; #=GS A0A3B4CZ47/76-144 AC A0A3B4CZ47 #=GS A0A3B4CZ47/76-144 OS Pygocentrus nattereri #=GS A0A3B4CZ47/76-144 DE Uncharacterized protein #=GS A0A3B4CZ47/76-144 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Characiformes; Characoidei; Serrasalmidae; Pygocentrus; Pygocentrus nattereri; #=GS B4J9H0/314-397 AC B4J9H0 #=GS B4J9H0/314-397 OS Drosophila grimshawi #=GS B4J9H0/314-397 DE GH20445 #=GS B4J9H0/314-397 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; #=GS B4KNT3/167-250 AC B4KNT3 #=GS B4KNT3/167-250 OS Drosophila mojavensis #=GS B4KNT3/167-250 DE Uncharacterized protein #=GS B4KNT3/167-250 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; #=GS F1QJT6/78-146 AC F1QJT6 #=GS F1QJT6/78-146 OS Danio rerio #=GS F1QJT6/78-146 DE Double-stranded RNA-binding protein Staufen homolog 2 #=GS F1QJT6/78-146 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS A0A2R8RW72/6-74 AC A0A2R8RW72 #=GS A0A2R8RW72/6-74 OS Danio rerio #=GS A0A2R8RW72/6-74 DE Double-stranded RNA-binding protein Staufen homolog 2 #=GS A0A2R8RW72/6-74 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Cypriniphysae; Cypriniformes; Cyprinoidei; Cyprinidae; Danio; Danio rerio; #=GS A0A3B4ECT8/76-144 AC A0A3B4ECT8 #=GS A0A3B4ECT8/76-144 OS Pygocentrus nattereri #=GS A0A3B4ECT8/76-144 DE Uncharacterized protein #=GS A0A3B4ECT8/76-144 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Otomorpha; Ostariophysi; Characiphysae; Characiformes; Characoidei; Serrasalmidae; Pygocentrus; Pygocentrus nattereri; #=GS B4HNC0/301-384 AC B4HNC0 #=GS B4HNC0/301-384 OS Drosophila sechellia #=GS B4HNC0/301-384 DE GM19927 #=GS B4HNC0/301-384 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; #=GS A0A1W4V0U5/301-384 AC A0A1W4V0U5 #=GS A0A1W4V0U5/301-384 OS Drosophila ficusphila #=GS A0A1W4V0U5/301-384 DE maternal effect protein staufen isoform X2 #=GS A0A1W4V0U5/301-384 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; #=GS A0A1W4VD53/301-384 AC A0A1W4VD53 #=GS A0A1W4VD53/301-384 OS Drosophila ficusphila #=GS A0A1W4VD53/301-384 DE maternal effect protein staufen isoform X1 #=GS A0A1W4VD53/301-384 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; #=GS B4QBV2/301-384 AC B4QBV2 #=GS B4QBV2/301-384 OS Drosophila simulans #=GS B4QBV2/301-384 DE GD25416 #=GS B4QBV2/301-384 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GS B4MYL8/164-248 AC B4MYL8 #=GS B4MYL8/164-248 OS Drosophila willistoni #=GS B4MYL8/164-248 DE Uncharacterized protein #=GS B4MYL8/164-248 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; #=GS A0A3B0IZG2/313-396 AC A0A3B0IZG2 #=GS A0A3B0IZG2/313-396 OS Drosophila guanche #=GS A0A3B0IZG2/313-396 DE Blast:Maternal effect protein staufen #=GS A0A3B0IZG2/313-396 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; #=GS Q290Q6/303-386 AC Q290Q6 #=GS Q290Q6/303-386 OS Drosophila pseudoobscura pseudoobscura #=GS Q290Q6/303-386 DE Uncharacterized protein #=GS Q290Q6/303-386 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; #=GS B3MHU6/305-388 AC B3MHU6 #=GS B3MHU6/305-388 OS Drosophila ananassae #=GS B3MHU6/305-388 DE Uncharacterized protein #=GS B3MHU6/305-388 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; #=GS A0A3B0JK14/200-283 AC A0A3B0JK14 #=GS A0A3B0JK14/200-283 OS Drosophila guanche #=GS A0A3B0JK14/200-283 DE Blast:Maternal effect protein staufen #=GS A0A3B0JK14/200-283 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; #=GS A0A0J9RGY3/301-384 AC A0A0J9RGY3 #=GS A0A0J9RGY3/301-384 OS Drosophila simulans #=GS A0A0J9RGY3/301-384 DE Uncharacterized protein, isoform B #=GS A0A0J9RGY3/301-384 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GF SQ 21 P25159/299-382 -DTSSSGRGGKDKTPMCLVNELARYNKITHQYRLTEERGPAHCKTFTVTLMLGDEEYSADGFKIKKAQHLAASKAIEETMYKHPP-- Q3L1C9/331-413 SEMQQSLANTKEKTPMCLINELARFNKMSHQYTLVDEQGPAHKKTFYVKLKLGDEEYSASGESIKKAQHAAAAIALVETKCPH---- Q7ZW47/6-74 -----------EKTPMCLVNELARFNRIQPQYKLLNEKGPAHAKIFTVQLCLGNQVWESEGSSIKKAQHSTATKALAESS------- E1JGK6/299-382 -DTSSSGRGGKDKTPMCLVNELARYNKITHQYRLTEERGPAHCKTFTVTLMLGDEEYSADGFKIKKAQHLAASKAIEETMYKHPP-- A0A2D0PPH0/6-74 -----------EKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLCLGEQVWEAEGSSIKKAQHSTANKALAESL------- A0A3B4CZ47/76-144 -----------EKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLCLGEQEWEAEGTSIKKAQHSTATKALAESS------- B4J9H0/314-397 -EDSSSARGAKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLKLGEEEYSADGFKIKKAQHLAASKAIEETKYKHPP-- B4KNT3/167-250 -EDGSTGRNGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLKLGEEEYSADGFKIKKAQHLAASKAIEETKYKHPP-- F1QJT6/78-146 -----------EKTPMCLVNELARFNRIQPQYKLLNEKGPAHAKIFTVQLCLGNQVWESEGSSIKKAQHSTATKALAESS------- A0A2R8RW72/6-74 -----------EKTPMCLVNELARFNRIQPQYKLLNEKGPAHAKIFTVQLCLGNQVWESEGSSIKKAQHSTATKALAESS------- A0A3B4ECT8/76-144 -----------EKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLCLGEQEWEAEGTSIKKAQHSTATKALAESS------- B4HNC0/301-384 -DTSSSGRGGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLMLGDEEYSADGFKIKKAQHLAASKAIEETMYKHPP-- A0A1W4V0U5/301-384 -DTSSSARGGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLMLGNEEYSADGFKIKKAQHLAASKAIEETTYKHPP-- A0A1W4VD53/301-384 -DTSSSARGGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLMLGNEEYSADGFKIKKAQHLAASKAIEETTYKHPP-- B4QBV2/301-384 -DTSSSGRGGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLMLGDEEYSADGFKIKKAQHLAASKAIEETMYKHPP-- B4MYL8/164-248 --VSASGRNGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLKLGDEEYSADGFKIKKAQHLAASKAIEETKYKHPPPK A0A3B0IZG2/313-396 -EDGSSGRSGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLKLGDEEYSADGFKIKKAQHMAASRAIEETKYKHPP-- Q290Q6/303-386 -EDSSSGRSGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLKLGDEEYSADGFKIKKAQHMAASRAIEETKYKHPP-- B3MHU6/305-388 -DTSSSARGAKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLKLGEEEYSADGFKIKKAQHLAASKAIEETKYKHPP-- A0A3B0JK14/200-283 -EDGSSGRSGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLKLGDEEYSADGFKIKKAQHMAASRAIEETKYKHPP-- A0A0J9RGY3/301-384 -DTSSSGRGGKDKTPMCLVNELARYNKITHQYRLTGERGPAHCKTFTVTLMLGDEEYSADGFKIKKAQHLAASKAIEETMYKHPP-- #=GC scorecons 021222121237999999899999797855996955979999596979593995655576945999999469579659632232200 #=GC scorecons_70 ___________*****************__****__******_*_***_*_**_*___***__******_**_***_*_________ #=GC scorecons_80 ____________**************_*__**_*__*_****_*_***_*_**_______*__******__*_**__*_________ #=GC scorecons_90 ____________************_*_*__**_*__*_****_*_*_*_*_**_______*__******__*__*__*_________ //