# STOCKHOLM 1.0
#=GF ID 3.30.1490.180/FF/000007
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 3.30.1490.180/FF/000007
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 65.368
#=GS Q9SVY0/476-554      AC Q9SVY0
#=GS Q9SVY0/476-554      OS Arabidopsis thaliana
#=GS Q9SVY0/476-554      DE DNA-directed RNA polymerase I subunit 1
#=GS Q9SVY0/476-554      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9SVY0/476-554      DR GO; GO:0005634; GO:0009506; 
#=GS Q9SVY0/476-554      DR EC; 2.7.7.6; 
#=GS A0A1I9LME9/463-541  AC A0A1I9LME9
#=GS A0A1I9LME9/463-541  OS Arabidopsis thaliana
#=GS A0A1I9LME9/463-541  DE DNA-directed RNA polymerase subunit
#=GS A0A1I9LME9/463-541  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A5BD07/591-669      AC A5BD07
#=GS A5BD07/591-669      OS Vitis vinifera
#=GS A5BD07/591-669      DE Uncharacterized protein
#=GS A5BD07/591-669      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS F6HL45/494-572      AC F6HL45
#=GS F6HL45/494-572      OS Vitis vinifera
#=GS F6HL45/494-572      DE DNA-directed RNA polymerase subunit
#=GS F6HL45/494-572      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS A0A1D6K230/423-501  AC A0A1D6K230
#=GS A0A1D6K230/423-501  OS Zea mays
#=GS A0A1D6K230/423-501  DE DNA-directed RNA polymerase subunit
#=GS A0A1D6K230/423-501  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1L9X1/461-539      AC I1L9X1
#=GS I1L9X1/461-539      OS Glycine max
#=GS I1L9X1/461-539      DE DNA-directed RNA polymerase subunit
#=GS I1L9X1/461-539      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS D7LVV3/478-556      AC D7LVV3
#=GS D7LVV3/478-556      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LVV3/478-556      DE DNA-directed RNA polymerase subunit
#=GS D7LVV3/478-556      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A1B6PAK0/466-544  AC A0A1B6PAK0
#=GS A0A1B6PAK0/466-544  OS Sorghum bicolor
#=GS A0A1B6PAK0/466-544  DE DNA-directed RNA polymerase subunit
#=GS A0A1B6PAK0/466-544  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS A0A0B2QR88/103-181  AC A0A0B2QR88
#=GS A0A0B2QR88/103-181  OS Glycine soja
#=GS A0A0B2QR88/103-181  DE DNA-directed RNA polymerase I subunit rpa1
#=GS A0A0B2QR88/103-181  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine soja; 
#=GS A0A1D6K250/466-544  AC A0A1D6K250
#=GS A0A1D6K250/466-544  OS Zea mays
#=GS A0A1D6K250/466-544  DE DNA-directed RNA polymerase subunit
#=GS A0A1D6K250/466-544  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K244/466-544  AC A0A1D6K244
#=GS A0A1D6K244/466-544  OS Zea mays
#=GS A0A1D6K244/466-544  DE DNA-directed RNA polymerase subunit
#=GS A0A1D6K244/466-544  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K251/466-544  AC A0A1D6K251
#=GS A0A1D6K251/466-544  OS Zea mays
#=GS A0A1D6K251/466-544  DE DNA-directed RNA polymerase subunit
#=GS A0A1D6K251/466-544  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K243/466-544  AC A0A1D6K243
#=GS A0A1D6K243/466-544  OS Zea mays
#=GS A0A1D6K243/466-544  DE DNA-directed RNA polymerase subunit
#=GS A0A1D6K243/466-544  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K232/466-544  AC A0A1D6K232
#=GS A0A1D6K232/466-544  OS Zea mays
#=GS A0A1D6K232/466-544  DE DNA-directed RNA polymerase subunit
#=GS A0A1D6K232/466-544  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K224/466-544  AC A0A1D6K224
#=GS A0A1D6K224/466-544  OS Zea mays
#=GS A0A1D6K224/466-544  DE DNA-directed RNA polymerase subunit
#=GS A0A1D6K224/466-544  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K242/466-544  AC A0A1D6K242
#=GS A0A1D6K242/466-544  OS Zea mays
#=GS A0A1D6K242/466-544  DE DNA-directed RNA polymerase subunit
#=GS A0A1D6K242/466-544  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K240/371-449  AC A0A1D6K240
#=GS A0A1D6K240/371-449  OS Zea mays
#=GS A0A1D6K240/371-449  DE DNA-directed RNA polymerase I subunit 1
#=GS A0A1D6K240/371-449  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K228/277-355  AC A0A1D6K228
#=GS A0A1D6K228/277-355  OS Zea mays
#=GS A0A1D6K228/277-355  DE DNA-directed RNA polymerase I subunit 1
#=GS A0A1D6K228/277-355  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K225/423-501  AC A0A1D6K225
#=GS A0A1D6K225/423-501  OS Zea mays
#=GS A0A1D6K225/423-501  DE DNA-directed RNA polymerase subunit
#=GS A0A1D6K225/423-501  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1D6K226/423-501  AC A0A1D6K226
#=GS A0A1D6K226/423-501  OS Zea mays
#=GS A0A1D6K226/423-501  DE DNA-directed RNA polymerase subunit
#=GS A0A1D6K226/423-501  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A1Z5R3S8/410-488  AC A0A1Z5R3S8
#=GS A0A1Z5R3S8/410-488  OS Sorghum bicolor
#=GS A0A1Z5R3S8/410-488  DE DNA-directed RNA polymerase subunit
#=GS A0A1Z5R3S8/410-488  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GF SQ 21
Q9SVY0/476-554              TYPERVTPWNVEKLREAIINGPDIHPGATHYSDKSSTMKLPSTEKARRAIARKLLSSRGATTELGKTCDINFEGKTVHR
A0A1I9LME9/463-541          TYPERVTPWNVEKLREAIINGPDIHPGATHYSDKSSTMKLPSTEKARRAIARKLLSSRGATTELGKTCDINFEGKTVHR
A5BD07/591-669              TYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYR
F6HL45/494-572              TYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISISRKLPSSRGVVAQPGRSSDNEFEGKIVYR
A0A1D6K230/423-501          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
I1L9X1/461-539              SYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRGVILHQGKISDHEFEGKVVYR
D7LVV3/478-556              TYPERVTPWNVEKLREAIINGPDIHPGATHYSDKLSTVKLPSTEKARRAIARKLLSSRGATTELGKTCDINFEGKTVHR
A0A1B6PAK0/466-544          TYPEKVTPWNTKKLQEAIRNGADIHPGATHYRDKNNTYKLQAVPAKRHSVAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A0B2QR88/103-181          SYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLTSRKLPTSRGVILHQGKISDHEFEGKVVYR
A0A1D6K250/466-544          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1D6K244/466-544          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1D6K251/466-544          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1D6K243/466-544          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1D6K232/466-544          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1D6K224/466-544          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1D6K242/466-544          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1D6K240/371-449          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1D6K228/277-355          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1D6K225/423-501          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1D6K226/423-501          TYPEKVTPWNTKRLQEAIRNGADIHPGATHYRDNNSMYKLQAVPAKRRSIAKMLPASRGSICQPGRDPNCEFESKVVYR
A0A1Z5R3S8/410-488          TYPEKVTPWNTKKLQEAIRNGADIHPGATHYRDKNNTYKLQAVPAKRHSVAKMLPASRGSICQPGRDPNCEFESKVVYR
#=GC scorecons              7999799999547966994996779999999496485499544454645667596599946465974464799696979
#=GC scorecons_70           **********__******_**_*********_*__*__**______*__***_**_***_____**__*_***_*_***
#=GC scorecons_80           ****_*****___*__**_**_*_*******_*__*__**_____________*__***_____*______**_*_***
#=GC scorecons_90           _***_*****___*__**_**___*******_*__*__**_____________*__***_____*______**_*_*_*
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