# STOCKHOLM 1.0 #=GF ID 3.30.1370.10/FF/000095 #=GF DE Exosome complex component Rrp4 #=GF AC 3.30.1370.10/FF/000095 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 85.658 #=GS 4ba2I03/156-233 AC Q9UXC4 #=GS 4ba2I03/156-233 OS Saccharolobus solfataricus P2 #=GS 4ba2I03/156-233 DE Exosome complex component Rrp4 #=GS 4ba2I03/156-233 DR CATH; 4ba2; I:154-231; #=GS 4ba2I03/156-233 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; #=GS 3l7zC03/154-228 AC Q9UXC4 #=GS 3l7zC03/154-228 OS Saccharolobus solfataricus P2 #=GS 3l7zC03/154-228 DE Exosome complex component Rrp4 #=GS 3l7zC03/154-228 DR CATH; 3l7z; C:154-228; #=GS 3l7zC03/154-228 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; #=GS 3l7zF03/154-249 AC Q9UXC4 #=GS 3l7zF03/154-249 OS Saccharolobus solfataricus P2 #=GS 3l7zF03/154-249 DE Exosome complex component Rrp4 #=GS 3l7zF03/154-249 DR CATH; 3l7z; F:154-241; #=GS 3l7zF03/154-249 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; #=GS B1L6N8/145-228 AC B1L6N8 #=GS B1L6N8/145-228 OS Candidatus Korarchaeum cryptofilum OPF8 #=GS B1L6N8/145-228 DE Exosome complex component Rrp4 #=GS B1L6N8/145-228 DR ORG; Archaea; Candidatus Korarchaeota; Candidatus Korarchaeum; Candidatus Korarchaeum cryptofilum; #=GS Q8TPX7/138-226 AC Q8TPX7 #=GS Q8TPX7/138-226 OS Methanosarcina acetivorans C2A #=GS Q8TPX7/138-226 DE Exosome complex component Rrp4 #=GS Q8TPX7/138-226 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina acetivorans; #=GS Q5JIR5/149-234 AC Q5JIR5 #=GS Q5JIR5/149-234 OS Thermococcus kodakarensis KOD1 #=GS Q5JIR5/149-234 DE Exosome complex component Rrp4 #=GS Q5JIR5/149-234 DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus kodakarensis; #=GS Q9UXC4/158-249 AC Q9UXC4 #=GS Q9UXC4/158-249 OS Saccharolobus solfataricus P2 #=GS Q9UXC4/158-249 DE Exosome complex component Rrp4 #=GS Q9UXC4/158-249 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; #=GS Q8ZVM8/147-235 AC Q8ZVM8 #=GS Q8ZVM8/147-235 OS Pyrobaculum aerophilum str. IM2 #=GS Q8ZVM8/147-235 DE Exosome complex component Rrp4 #=GS Q8ZVM8/147-235 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum aerophilum; #=GS A0A0E3R9I7/138-229 AC A0A0E3R9I7 #=GS A0A0E3R9I7/138-229 OS Methanosarcina mazei SarPi #=GS A0A0E3R9I7/138-229 DE Exosome complex component Rrp4 #=GS A0A0E3R9I7/138-229 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; #=GS Q469M4/142-229 AC Q469M4 #=GS Q469M4/142-229 OS Methanosarcina barkeri str. Fusaro #=GS Q469M4/142-229 DE Exosome complex component Rrp4 #=GS Q469M4/142-229 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina barkeri; #=GS A0A1E7GAC2/142-230 AC A0A1E7GAC2 #=GS A0A1E7GAC2/142-230 OS Methanosarcina sp. Ant1 #=GS A0A1E7GAC2/142-230 DE Exosome complex component Rrp4 #=GS A0A1E7GAC2/142-230 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina sp. Ant1; #=GS B7R2M5/149-234 AC B7R2M5 #=GS B7R2M5/149-234 OS Thermococcus sp. AM4 #=GS B7R2M5/149-234 DE Exosome complex component Rrp4 #=GS B7R2M5/149-234 DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus sp. AM4; #=GS Q8PTT9/138-229 AC Q8PTT9 #=GS Q8PTT9/138-229 OS Methanosarcina mazei Go1 #=GS Q8PTT9/138-229 DE Exosome complex component Rrp4 #=GS Q8PTT9/138-229 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; #=GS A0A0E3RM00/138-229 AC A0A0E3RM00 #=GS A0A0E3RM00/138-229 OS Methanosarcina mazei S-6 #=GS A0A0E3RM00/138-229 DE Exosome complex component Rrp4 #=GS A0A0E3RM00/138-229 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; #=GS A0A0E3WNJ6/138-229 AC A0A0E3WNJ6 #=GS A0A0E3WNJ6/138-229 OS Methanosarcina mazei LYC #=GS A0A0E3WNJ6/138-229 DE Exosome complex component Rrp4 #=GS A0A0E3WNJ6/138-229 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; #=GS A0A0E3QMD7/142-229 AC A0A0E3QMD7 #=GS A0A0E3QMD7/142-229 OS Methanosarcina barkeri str. Wiesmoor #=GS A0A0E3QMD7/142-229 DE Exosome complex component Rrp4 #=GS A0A0E3QMD7/142-229 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina barkeri; #=GS A0A157SZ15/158-249 AC A0A157SZ15 #=GS A0A157SZ15/158-249 OS Saccharolobus solfataricus #=GS A0A157SZ15/158-249 DE Exosome complex component Rrp4 #=GS A0A157SZ15/158-249 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Saccharolobus; Saccharolobus solfataricus; #=GS A0A371QWJ1/147-235 AC A0A371QWJ1 #=GS A0A371QWJ1/147-235 OS Pyrobaculum aerophilum #=GS A0A371QWJ1/147-235 DE Exosome complex component Rrp4 #=GS A0A371QWJ1/147-235 DR ORG; Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum; Pyrobaculum aerophilum; #=GF SQ 18 4ba2I03/156-233 GIVIDIMPVKVPRVIGKNKSMYETLTSKSGCSIFVANNGRIWATCPSRFSEEILIEAIRKIENESHIKGLTDRIKQFI------------------- 3l7zC03/154-228 GIVIDIMPVKVPRVIGKNKSMYETLTSKSGCSIFVANNGRIWATCPSRFSEEILIEAIRKIENESHIKGLTDRIK---------------------- 3l7zF03/154-249 GIVIDIMPVKVPRVIGKNKSMYETLTSKSGCSIFVANNGRIWATCPSRFSEEILIEAIRKIENESHIKGLTDRIKQFIEEKLGERNASSGETKTNS- B1L6N8/145-228 GYLLEVDPAKVPRVIGKRQSMLSMLKEATRSEIIVANNGRIWVKPPSVKELIVLEKALKKIEEESHVSGLSDRISSLLSQELSR------------- Q8TPX7/138-226 GQIIKVESVKVPRVIGHGGSMISMLKKETNCSIFVGQNGRIWIDGKDE-DIELLSKALRKIELEAQRSGLTDRIYNFLKNERIRQKESKP------- Q5JIR5/149-234 GQLVTITPSKVPRLIGKGGSMINMIKTLTGTRIIVGQNGWVWVSGKNDELERLAIEAILKVDRESHTQGLTDRVKEFLLSRLRELK----------- Q9UXC4/158-249 ----DIMPVKVPRVIGKNKSMYETLTSKSGCSIFVANNGRIWATCPSRFSEEILIEAIRKIENESHIKGLTDRIKQFIEEKLGERNASSGETKTNS- Q8ZVM8/147-235 GTVVEITPVKVPRVIGKRGSMLNTLM-ELGCDIVVGQNGRIWVKCKDPRDEVFLASLIRKIEAESHVMGLTDRIRAEIENYKTSKQQGTV------- A0A0E3R9I7/138-229 GQIVEVEPVKVPRVIGHGGSMISMLKKETNCSIFVGQNGRIWIDGKDE-DIELLSKALRKIEAEAQRSGLTDRIYNFLKNERMKEKESKP---VEF- Q469M4/142-229 ----EVEPVKVPRVIGHGGSMISMLKKETNCSIFVGQNGRIWIDGKDD-DVELLSKALRKIEAEAQRSGLTDRIYNFLKNERSKQKESKP---AKF- A0A1E7GAC2/142-230 ----EVEPVKVPRVIGHGGSMISMLKKETNCSIFVGQNGRIWIDGKDE-DVELLSRALRKIEAEAQRSGLTDKIYNFLKNERIRQKESKP---VKFF B7R2M5/149-234 GQLVTITPSKVPRVIGKGGSMINMIKKLTGTRIIVGQNGWVWVSGKNDELEKLAVEAILKVDRESHTQGLTDRVKEFLLSRLRDLK----------- Q8PTT9/138-229 GQIVEVEPVKVPRVIGHGGSMISMLKKETNCSIFVGQNGRIWIDGKDE-DIELLSKALRKIEAEAQRSGLTDRIYNFLKNERMKEKESKP---VEF- A0A0E3RM00/138-229 GQIVEVEPVKVPRVIGHGGSMISMLKKETNCSIFVGQNGRIWIDGKDE-DIELLSKALRKIEAEAQRSGLTDRIYNFLKNERMKEKESKP---VEF- A0A0E3WNJ6/138-229 GQIVEVEPVKVPRVIGHGGSMISMLKKETNCSIFVGQNGRIWIDGKDE-DIELLSKALRKIEAEAQRSGLTDRIYNFLKNERMKEKESKP---VEF- A0A0E3QMD7/142-229 ----EVEPVKVPRVIGHGGSMISMLKKETNCSIFVGQNGRIWIDGKDD-DVELLSKALRKIEAEAQRSGLTDRIYNFLKNERSKQKESKP---AKF- A0A157SZ15/158-249 ----DIMPVKVPRVIGKNKSMYETLTSKSGCSIFVANNGRIWATCPSRFSEEILIEAIRKIENESHIKGLTDRIKQFIEEKLGERNASSGETKTNS- A0A371QWJ1/147-235 GTVVEITPVKVPRVIGKRGSMLNTLM-ELGCDIVVGQNGRIWVKCKDPRDEVFLASLIRKIEAESHVMGLTDRIRAEIENYKTSKQQGTV------- #=GC scorecons 4233574869999899655994457434556596966997895455531445574576698849664499898843553333232323220001110 #=GC scorecons_70 _____*_**********__**___*_____*_*_**_*****___________*__******_***__******_______________________ #=GC scorecons_80 _______*_*******___**___*_______*_*__*****___________*__*__***_*____******_______________________ #=GC scorecons_90 _______*_*******___**___________*_*__**_**_________________***_*____******_______________________ //