# STOCKHOLM 1.0
#=GF ID 3.30.1360.140/FF/000003
#=GF DE DNA-directed RNA polymerase subunit
#=GF AC 3.30.1360.140/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 10.613
#=GS P14248/1482-1619      AC P14248
#=GS P14248/1482-1619      OS Plasmodium falciparum CDC/Honduras
#=GS P14248/1482-1619      DE DNA-directed RNA polymerase II subunit RPB1
#=GS P14248/1482-1619      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS P14248/1482-1619      DR EC; 2.7.7.6; 
#=GS O77375/1479-1616      AC O77375
#=GS O77375/1479-1616      OS Plasmodium falciparum 3D7
#=GS O77375/1479-1616      DE DNA-directed RNA polymerase subunit
#=GS O77375/1479-1616      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS O77375/1479-1616      DR GO; GO:0003899; GO:0005515; GO:0005665; GO:0006366; 
#=GS A0A151LVS8/1469-1610  AC A0A151LVS8
#=GS A0A151LVS8/1469-1610  OS Plasmodium gaboni
#=GS A0A151LVS8/1469-1610  DE DNA-directed RNA polymerase subunit
#=GS A0A151LVS8/1469-1610  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium gaboni; 
#=GS A0A151LU26/1482-1617  AC A0A151LU26
#=GS A0A151LU26/1482-1617  OS Plasmodium reichenowi
#=GS A0A151LU26/1482-1617  DE DNA-directed RNA polymerase subunit
#=GS A0A151LU26/1482-1617  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A024WXX9/190-328    AC A0A024WXX9
#=GS A0A024WXX9/190-328    OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WXX9/190-328    DE DNA-directed RNA polymerase II subunit RPB1
#=GS A0A024WXX9/190-328    DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JV02/740-877        AC W7JV02
#=GS W7JV02/740-877        OS Plasmodium falciparum UGT5.1
#=GS W7JV02/740-877        DE DNA-directed RNA polymerase II subunit RPB1
#=GS W7JV02/740-877        DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BTT7/1479-1616  AC A0A2I0BTT7
#=GS A0A2I0BTT7/1479-1616  OS Plasmodium falciparum NF54
#=GS A0A2I0BTT7/1479-1616  DE DNA-directed RNA polymerase subunit
#=GS A0A2I0BTT7/1479-1616  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024XD78/1489-1626  AC A0A024XD78
#=GS A0A024XD78/1489-1626  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024XD78/1489-1626  DE DNA-directed RNA polymerase subunit
#=GS A0A024XD78/1489-1626  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1IEZ8/1483-1620  AC A0A0L1IEZ8
#=GS A0A0L1IEZ8/1483-1620  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1IEZ8/1483-1620  DE DNA-directed RNA polymerase subunit
#=GS A0A0L1IEZ8/1483-1620  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L0CUL0/1485-1622  AC A0A0L0CUL0
#=GS A0A0L0CUL0/1485-1622  OS Plasmodium falciparum RAJ116
#=GS A0A0L0CUL0/1485-1622  DE DNA-directed RNA polymerase subunit
#=GS A0A0L0CUL0/1485-1622  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VVE9/1481-1618  AC A0A024VVE9
#=GS A0A024VVE9/1481-1618  OS Plasmodium falciparum FCH/4
#=GS A0A024VVE9/1481-1618  DE DNA-directed RNA polymerase subunit
#=GS A0A024VVE9/1481-1618  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7GCA2/1482-1619      AC W7GCA2
#=GS W7GCA2/1482-1619      OS Plasmodium falciparum Santa Lucia
#=GS W7GCA2/1482-1619      DE DNA-directed RNA polymerase subunit
#=GS W7GCA2/1482-1619      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7K7P4/1482-1619  AC A0A0L7K7P4
#=GS A0A0L7K7P4/1482-1619  OS Plasmodium falciparum HB3
#=GS A0A0L7K7P4/1482-1619  DE DNA-directed RNA polymerase subunit
#=GS A0A0L7K7P4/1482-1619  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FEB7/1483-1620      AC W7FEB7
#=GS W7FEB7/1483-1620      OS Plasmodium falciparum 7G8
#=GS W7FEB7/1483-1620      DE DNA-directed RNA polymerase subunit
#=GS W7FEB7/1483-1620      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7K048/1479-1616      AC W7K048
#=GS W7K048/1479-1616      OS Plasmodium falciparum NF54
#=GS W7K048/1479-1616      DE DNA-directed RNA polymerase subunit
#=GS W7K048/1479-1616      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IPD2/1485-1622      AC W4IPD2
#=GS W4IPD2/1485-1622      OS Plasmodium falciparum NF135/5.C10
#=GS W4IPD2/1485-1622      DE DNA-directed RNA polymerase subunit
#=GS W4IPD2/1485-1622      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IQ17/1482-1619      AC W4IQ17
#=GS W4IQ17/1482-1619      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4IQ17/1482-1619      DE DNA-directed RNA polymerase subunit
#=GS W4IQ17/1482-1619      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7LXL7/1482-1619  AC A0A0L7LXL7
#=GS A0A0L7LXL7/1482-1619  OS Plasmodium falciparum Dd2
#=GS A0A0L7LXL7/1482-1619  DE DNA-directed RNA polymerase subunit
#=GS A0A0L7LXL7/1482-1619  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WD21/1486-1623  AC A0A024WD21
#=GS A0A024WD21/1486-1623  OS Plasmodium falciparum Tanzania (2000708)
#=GS A0A024WD21/1486-1623  DE DNA-directed RNA polymerase subunit
#=GS A0A024WD21/1486-1623  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A060RNM2/1482-1617  AC A0A060RNM2
#=GS A0A060RNM2/1482-1617  OS Plasmodium reichenowi
#=GS A0A060RNM2/1482-1617  DE DNA-directed RNA polymerase subunit
#=GS A0A060RNM2/1482-1617  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A024VBT8/1484-1621  AC A0A024VBT8
#=GS A0A024VBT8/1484-1621  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024VBT8/1484-1621  DE DNA-directed RNA polymerase subunit
#=GS A0A024VBT8/1484-1621  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 21
P14248/1482-1619              TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
O77375/1479-1616              TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
A0A151LVS8/1469-1610          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDAVDHHNEQVDEQEEEDENIVDNERGNFD
A0A151LU26/1482-1617          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHIVGN------
A0A024WXX9/190-328            TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDRG---
W7JV02/740-877                TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
A0A2I0BTT7/1479-1616          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
A0A024XD78/1489-1626          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
A0A0L1IEZ8/1483-1620          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
A0A0L0CUL0/1485-1622          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
A0A024VVE9/1481-1618          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
W7GCA2/1482-1619              TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
A0A0L7K7P4/1482-1619          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
W7FEB7/1483-1620              TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
W7K048/1479-1616              TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
W4IPD2/1485-1622              TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
W4IQ17/1482-1619              TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
A0A0L7LXL7/1482-1619          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
A0A024WD21/1486-1623          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
A0A060RNM2/1482-1617          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHIVGN------
A0A024VBT8/1484-1621          TTLKQLTSHAQIIYDPNTTTTILEEDKSWVNEFYEFPDEDDTQYSLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDELDIIYTDDNSEDLVLRIRVKYLNGEYNFMNYDVVDNANEQVDEQEEDEEHLVANDR----
#=GC scorecons                9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999996996599999999977966949450000
#=GC scorecons_70             **********************************************************************************************************************_*************_*_*______
#=GC scorecons_80             ******************************************************************************************************************_**__************__*_*______
#=GC scorecons_90             ******************************************************************************************************************_**__*********__*__*_*______
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