# STOCKHOLM 1.0
#=GF ID 3.30.1360.10/FF/000033
#=GF DE DNA-directed RNA polymerase II, putative
#=GF AC 3.30.1360.10/FF/000033
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 29.279
#=GS Q386T9/11-132      AC Q386T9
#=GS Q386T9/11-132      OS Trypanosoma brucei brucei TREU927
#=GS Q386T9/11-132      DE DNA-directed RNA polymerase II, putative
#=GS Q386T9/11-132      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS Q386T9/11-132      DR GO; GO:0003899; GO:0005634; GO:0005654; GO:0006351; 
#=GS E9ADD4/15-131      AC E9ADD4
#=GS E9ADD4/15-131      OS Leishmania major
#=GS E9ADD4/15-131      DE DNA-directed RNA polymerase II-like protein
#=GS E9ADD4/15-131      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS A0A1G4IK33/11-132  AC A0A1G4IK33
#=GS A0A1G4IK33/11-132  OS Trypanosoma equiperdum
#=GS A0A1G4IK33/11-132  DE DNA-directed RNA polymerase II, putative
#=GS A0A1G4IK33/11-132  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS D0A622/11-132      AC D0A622
#=GS D0A622/11-132      OS Trypanosoma brucei gambiense DAL972
#=GS D0A622/11-132      DE DNA-directed RNA polymerase II, putative
#=GS D0A622/11-132      DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei gambiense; 
#=GS A0A3L6KUF9/11-132  AC A0A3L6KUF9
#=GS A0A3L6KUF9/11-132  OS Trypanosoma brucei equiperdum
#=GS A0A3L6KUF9/11-132  DE DNA-directed RNA polymerase II
#=GS A0A3L6KUF9/11-132  DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei equiperdum; 
#=GF SQ 5
Q386T9/11-132              NNDITADSLLDTKDCRKIVEEVSSKMPNSSLFKLDREDHTLANLLRMRLHENPLVHIAGYRVPHPTQHRVELRVQTSSDGTGKPIPTPKEALLEAVGSCMKDLEEFEGAFLREAQSKGLDVE
E9ADD4/15-131              ----TPDSLVDVPGDRKIVEQISNTMANSSLFKMEKEDHTLANLLRMKLHESPFVQIAGYRVPHPTKHNVELRVQTASNGTDAPVPAPKKALQDAVDGCLKDLEVFEEQLRREAQLKGLEA-
A0A1G4IK33/11-132          NNDITADSLLDTKDCRKIVEEVSSKMPNSSLFKLDREDHTLANLLRMRLHENPLVHIAGYRVPHPTQHRVELRVQTSSDGTGKPIPTPKEALLEAVGSCMKDLEEFEGAFLREAQSKGLDVE
D0A622/11-132              NNDITADSLLDTKDCRKIVEEVSSKMPNSSLFKLDREDHTLANLLRMRLHENPLVHIAGYRVPHPTQHRVELRVQTSSDGTGKPIPTPKEALLEAVGSCMKDLEEFEGAFLREAQSKGLDVE
A0A3L6KUF9/11-132          NNDITADSLLDTKDCRKIVEEVSSKMPNSSLFKLDREDHTLANLLRMRLHENPLVHIAGYRVPHPTQHRVELRVQTSSDGTGKPIPTPKEALLEAVGSCMKDLEEFEGAFLREAQSKGLDVE
#=GC scorecons             22229599959435399999569549599999956699999999999699959595999999999959499999995959954969599599369955959999399545399993999652
#=GC scorecons_70          ____*_***_*____*****_**__*_******_*****************_*_*_**********_*_*******_*_**__***_**_**_***__*_****_**____****_****__
#=GC scorecons_80          ____*_***_*____*****__*__*_******___***********_***_*_*_**********_*_*******_*_**__*_*_**_**__**__*_****_**____****_***___
#=GC scorecons_90          ____*_***_*____*****__*__*_******___***********_***_*_*_**********_*_*******_*_**__*_*_**_**__**__*_****_**____****_***___
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