# STOCKHOLM 1.0
#=GF ID 3.30.1360.10/FF/000018
#=GF DE DNA-directed RNA polymerase I/III subunit, putative
#=GF AC 3.30.1360.10/FF/000018
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 79.270
#=GS Q8ILU4/2-96      AC Q8ILU4
#=GS Q8ILU4/2-96      OS Plasmodium falciparum 3D7
#=GS Q8ILU4/2-96      DE DNA-directed RNA polymerases I and III subunit RPAC2, putative
#=GS Q8ILU4/2-96      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8ILU4/2-96      DR GO; GO:0003899; GO:0006351; 
#=GS Q54ES6/8-116     AC Q54ES6
#=GS Q54ES6/8-116     OS Dictyostelium discoideum
#=GS Q54ES6/8-116     DE DNA-directed RNA polymerases I and III subunit rpc19
#=GS Q54ES6/8-116     DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; 
#=GS Q54ES6/8-116     DR GO; GO:0003899; GO:0005666; GO:0005736; GO:0006360; GO:0006383; 
#=GS A0E1A2/6-122     AC A0E1A2
#=GS A0E1A2/6-122     OS Paramecium tetraurelia
#=GS A0E1A2/6-122     DE Uncharacterized protein
#=GS A0E1A2/6-122     DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS F0ZJT3/8-116     AC F0ZJT3
#=GS F0ZJT3/8-116     OS Dictyostelium purpureum
#=GS F0ZJT3/8-116     DE Uncharacterized protein
#=GS F0ZJT3/8-116     DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium purpureum; 
#=GS A0A060S4L7/2-96  AC A0A060S4L7
#=GS A0A060S4L7/2-96  OS Plasmodium reichenowi
#=GS A0A060S4L7/2-96  DE DNA-directed RNA polymerase I/III subunit, putative
#=GS A0A060S4L7/2-96  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A2P9BLS6/2-96  AC A0A2P9BLS6
#=GS A0A2P9BLS6/2-96  OS Plasmodium sp. gorilla clade G1
#=GS A0A2P9BLS6/2-96  DE DNA-directed RNA polymerase I/III subunit, putative
#=GS A0A2P9BLS6/2-96  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. gorilla clade G1; 
#=GS A0A2P9CDC9/2-96  AC A0A2P9CDC9
#=GS A0A2P9CDC9/2-96  OS Plasmodium sp. gorilla clade G2
#=GS A0A2P9CDC9/2-96  DE DNA-directed RNA polymerase I/III subunit, putative
#=GS A0A2P9CDC9/2-96  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium sp. gorilla clade G2; 
#=GS A0A151L9X2/2-96  AC A0A151L9X2
#=GS A0A151L9X2/2-96  OS Plasmodium gaboni
#=GS A0A151L9X2/2-96  DE DNA-directed RNA polymerase I/III subunit, putative
#=GS A0A151L9X2/2-96  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium gaboni; 
#=GS A0A024X1K7/2-96  AC A0A024X1K7
#=GS A0A024X1K7/2-96  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024X1K7/2-96  DE Uncharacterized protein
#=GS A0A024X1K7/2-96  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7KLV6/2-96  AC A0A0L7KLV6
#=GS A0A0L7KLV6/2-96  OS Plasmodium falciparum HB3
#=GS A0A0L7KLV6/2-96  DE Uncharacterized protein
#=GS A0A0L7KLV6/2-96  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4IB84/2-96      AC W4IB84
#=GS W4IB84/2-96      OS Plasmodium falciparum NF135/5.C10
#=GS W4IB84/2-96      DE Uncharacterized protein
#=GS W4IB84/2-96      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7FWI2/2-96      AC W7FWI2
#=GS W7FWI2/2-96      OS Plasmodium falciparum Santa Lucia
#=GS W7FWI2/2-96      DE Uncharacterized protein
#=GS W7FWI2/2-96      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WFY7/2-96  AC A0A024WFY7
#=GS A0A024WFY7/2-96  OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WFY7/2-96  DE Uncharacterized protein
#=GS A0A024WFY7/2-96  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0DTF6/10-122    AC A0DTF6
#=GS A0DTF6/10-122    OS Paramecium tetraurelia
#=GS A0DTF6/10-122    DE Uncharacterized protein
#=GS A0DTF6/10-122    DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GF SQ 14
Q8ILU4/2-96              ----EEKKYYENLKNLT------------------HATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGK-PAIDILKESLDDLGNMCDIMLNKFNEALKQS
Q54ES6/8-116             -------AATESCNSFIPPSFDVNKVEII-SDRPDCATFIFTDEDHTLGNALHYVLMKNPKVDFSGYSIPHPSDNRMNLRIQTKSNITAQESLLQGLTDIKDISRHIFETFNNALDQ-
A0E1A2/6-122             SEEQDVNIEEEELSKPIILAQATKGMEIQEHSDPFNGTFVFFDEDHTLGNSLRYILANQPNVEFCGYSLPHPSENKMNMRLQTVNE-TKEKIMNDGLKCLSQICDIIEDKFKKALENK
F0ZJT3/8-116             -------NATDSCNSFIPPSFDVNKVEII-SDRPDCATFIFTDEDHTLGNSLHYVLMKNPKVDFSGYSIPHPSDNRMNLRIQTKGHISAQESLLQGLNDIKDISAHILDTFNNTADN-
A0A060S4L7/2-96          ----EEKKYYENLKNLT------------------HATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGK-PAIDILKESLDDLGNMCDIMLNKFNEALKQS
A0A2P9BLS6/2-96          ----EEKKYYENLKNLT------------------HATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGK-PAIDILKESLDDLGNMCDIMLNKFNEALKQS
A0A2P9CDC9/2-96          ----EEKKYYENLKNLT------------------HATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGK-PAVDVLKESLDDLGNMCDIMLNKFNDALKQS
A0A151L9X2/2-96          ----EEKKYYENLKNLT------------------HATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGK-PAVDVLKESLDDLGNMCDIMLNKFNDALKQS
A0A024X1K7/2-96          ----EEKKYYENLKNLT------------------HATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGK-PAIDILKESLDDLGNMCDIMLNKFNEALKQS
A0A0L7KLV6/2-96          ----EEKKYYENLKNLT------------------HATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGK-PAIDILKESLDDLGNMCDIMLNKFNEALKQS
W4IB84/2-96              ----EEKKYYENLKNLT------------------HATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGK-PAIDILKESLDDLGNMCDIMLNKFNEALKQS
W7FWI2/2-96              ----EEKKYYENLKNLT------------------HATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGK-PAIDILKESLDDLGNMCDIMLNKFNEALKQS
A0A024WFY7/2-96          ----EEKKYYENLKNLT------------------HATFCFENEDHTLGNCLRCILLQKEGVEFAGYTVPHPTQPEINVRIQTTGK-PAIDILKESLDDLGNMCDIMLNKFNEALKQS
A0DTF6/10-122            ----EINIEEEELSKPIILAQANKGMEIQENSDPFNGTFVFFDEDHTLGNSLRYILANQPNVEFCGYSLPHPSENKMNMRLQTVNE-TKEKVMNDGLKCLSQICDIIEDKFKQALEKK
#=GC scorecons           0000423333845444611101011122000112046994936999999959667945554979499659996555695969945405635574569456456655645696477552
#=GC scorecons_70        __________*_________________________***_*_********_*****_____***_**__***____**_****_________*___*__*__**__*___**_**___
#=GC scorecons_80        __________*__________________________**_*__*******_*__**_____***_**__***_____*_*_**_____________*_____________*__**___
#=GC scorecons_90        _____________________________________**_*__*******_*___*_____*_*_**__***_____*_*_**_____________*_____________*_______
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