# STOCKHOLM 1.0 #=GF ID 3.30.1360.10/FF/000017 #=GF DE DNA-directed RNA polymerase I-like protein #=GF AC 3.30.1360.10/FF/000017 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 87.842 #=GS Q54DH7/21-48_176-185_261-290 AC Q54DH7 #=GS Q54DH7/21-48_176-185_261-290 OS Dictyostelium discoideum #=GS Q54DH7/21-48_176-185_261-290 DE DNA-directed RNA polymerase II subunit rpb3 #=GS Q54DH7/21-48_176-185_261-290 DR ORG; Eukaryota; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum; #=GS Q54DH7/21-48_176-185_261-290 DR GO; GO:0003899; GO:0005665; GO:0006366; #=GS Q580S5/18-43_167-176_252-288 AC Q580S5 #=GS Q580S5/18-43_167-176_252-288 OS Trypanosoma brucei brucei TREU927 #=GS Q580S5/18-43_167-176_252-288 DE DNA-directed RNA polymerase II subunit 3, putative #=GS Q580S5/18-43_167-176_252-288 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; #=GS Q580S5/18-43_167-176_252-288 DR GO; GO:0005634; GO:0005665; #=GS E9ADL6/18-43_168-177_253-289 AC E9ADL6 #=GS E9ADL6/18-43_168-177_253-289 OS Leishmania major #=GS E9ADL6/18-43_168-177_253-289 DE DNA-directed RNA polymerase I-like protein #=GS E9ADL6/18-43_168-177_253-289 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; #=GS E9ADL6/18-43_168-177_253-289 DR GO; GO:0005665; #=GS A0CLS1/22-47_170-179_252-284 AC A0CLS1 #=GS A0CLS1/22-47_170-179_252-284 OS Paramecium tetraurelia #=GS A0CLS1/22-47_170-179_252-284 DE Uncharacterized protein #=GS A0CLS1/22-47_170-179_252-284 DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; #=GS H9GUD4/9-43_165-206 AC H9GUD4 #=GS H9GUD4/9-43_165-206 OS Anolis carolinensis #=GS H9GUD4/9-43_165-206 DE Uncharacterized protein #=GS H9GUD4/9-43_165-206 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; #=GS A0A1E1IVK6/18-43_168-177_253-289 AC A0A1E1IVK6 #=GS A0A1E1IVK6/18-43_168-177_253-289 OS Leishmania guyanensis #=GS A0A1E1IVK6/18-43_168-177_253-289 DE Putative DNA-directed RNA polymerase I-like protein #=GS A0A1E1IVK6/18-43_168-177_253-289 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania guyanensis; #=GS E9BKG1/18-43_168-177_253-289 AC E9BKG1 #=GS E9BKG1/18-43_168-177_253-289 OS Leishmania donovani BPK282A1 #=GS E9BKG1/18-43_168-177_253-289 DE DNA-directed RNA polymerase I-like protein #=GS E9BKG1/18-43_168-177_253-289 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; #=GS A4HH22/18-43_168-177_253-289 AC A4HH22 #=GS A4HH22/18-43_168-177_253-289 OS Leishmania braziliensis #=GS A4HH22/18-43_168-177_253-289 DE DNA-directed RNA polymerase I-like protein #=GS A4HH22/18-43_168-177_253-289 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; #=GS E9AM65/18-43_168-177_253-289 AC E9AM65 #=GS E9AM65/18-43_168-177_253-289 OS Leishmania mexicana MHOM/GT/2001/U1103 #=GS E9AM65/18-43_168-177_253-289 DE DNA-directed RNA polymerase I-like protein #=GS E9AM65/18-43_168-177_253-289 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; #=GS C9ZKR1/18-43_167-176_252-288 AC C9ZKR1 #=GS C9ZKR1/18-43_167-176_252-288 OS Trypanosoma brucei gambiense DAL972 #=GS C9ZKR1/18-43_167-176_252-288 DE DNA-directed RNA polymerase II subunit 3,putative #=GS C9ZKR1/18-43_167-176_252-288 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei gambiense; #=GS A4I451/18-43_168-177_253-289 AC A4I451 #=GS A4I451/18-43_168-177_253-289 OS Leishmania infantum #=GS A4I451/18-43_168-177_253-289 DE DNA-directed RNA polymerase I-like protein #=GS A4I451/18-43_168-177_253-289 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; #=GS A0A088RVL6/18-43_168-177_253-289 AC A0A088RVL6 #=GS A0A088RVL6/18-43_168-177_253-289 OS Leishmania panamensis #=GS A0A088RVL6/18-43_168-177_253-289 DE DNA-directed RNA polymerase I-like protein #=GS A0A088RVL6/18-43_168-177_253-289 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; #=GS A0A3S7X218/18-43_168-177_253-289 AC A0A3S7X218 #=GS A0A3S7X218/18-43_168-177_253-289 OS Leishmania donovani #=GS A0A3S7X218/18-43_168-177_253-289 DE RNA polymerase subunit, putative #=GS A0A3S7X218/18-43_168-177_253-289 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; #=GS A0A3P3ZBD6/18-43_168-177_253-289 AC A0A3P3ZBD6 #=GS A0A3P3ZBD6/18-43_168-177_253-289 OS Leishmania braziliensis MHOM/BR/75/M2904 #=GS A0A3P3ZBD6/18-43_168-177_253-289 DE RNA_polymerase_subunit #=GS A0A3P3ZBD6/18-43_168-177_253-289 DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; #=GS A0DID7/22-47_181-190_263-295 AC A0DID7 #=GS A0DID7/22-47_181-190_263-295 OS Paramecium tetraurelia #=GS A0DID7/22-47_181-190_263-295 DE Uncharacterized protein #=GS A0DID7/22-47_181-190_263-295 DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; #=GF SQ 15 Q54DH7/21-48_176-185_261-290 -------NDSIIFILSNTDISVANALRRVMIAEVPS-PSCVATYQFDK-----FIFTVESSGALKPEDIVLYAIQIIKRKL--- Q580S5/18-43_167-176_252-288 ---------TLVFKLNEVDNSFANGLRRVLLAEVPM-PVSTVSMRYDARGHYNFTFTVETTGVLPVLQLIRDAVDVLRRKLQR- E9ADL6/18-43_168-177_253-289 ---------TLTFQLSEVDSSFANALRRVMLAEIPM-PVATVAMRYNKMGYFDFTFTVESTGVLPVLQIVYDAVAVVRKKLQR- A0CLS1/22-47_170-179_252-284 --------EKCKFSF-EGDLSIANAIRRVMIAEVPT-PINIATFRHNK-----YIFTVESAGQLKAADIVQKALIVLRKKVDEI H9GUD4/9-43_165-206 VRIMELSNKNVKFIVKNTDLAGDNSIRRVFIAEVPKWNPTTGTFEYN------LDIALRHTIYPKPEEWPKSEYSEIDKDNPN- A0A1E1IVK6/18-43_168-177_253-289 ---------TLTFQLNEVDSSFANALRRVMLAEIPM-PVATVAMRYSKMGYFDFTFVVESTGVLPVLQIVYDAVAVLRKKLQR- E9BKG1/18-43_168-177_253-289 ---------TLTFQLSEVDSSFANALRRVMLAEIPM-PVATVAMRYNKMGYFDFTFTVESTGVLPVLQIVYDAVTVVRRKLQR- A4HH22/18-43_168-177_253-289 ---------TLTFQLNEVDSSFANALRRVMLAEIPM-PVATVAMRYSKMGYFDFTFVVESTGVLPVLQIVYDAVAVLRKKLQR- E9AM65/18-43_168-177_253-289 ---------TLTFQLNEVDSSFANALRRVMLAEIPM-PVATVAMRYNKMGYFDFTFTVESTGVLPVLQIVYDAVAVVRKKLQR- C9ZKR1/18-43_167-176_252-288 ---------TLVFKLNEVDNSFANGLRRVLLAEVPM-PVSTVSMRYDARGHYNFTFTVETTGVLPVLQLIRDAVDVLRRKLQR- A4I451/18-43_168-177_253-289 ---------TLTFQLSEVDSSFANALRRVMLAEIPM-PVATVAMRYNKMGYFDFTFTVESTGVLPVLQIVYDAVTVVRRKLQR- A0A088RVL6/18-43_168-177_253-289 ---------TLTFQLNEVDSSFANALRRVMLAEIPM-PVATVAMRYSKMGYFDFTFVVESTGVLPVLQIVYDAVAVLRKKLQR- A0A3S7X218/18-43_168-177_253-289 ---------TLTFQLSEVDSSFANALRRVMLAEIPM-PVATVAMRYNKMGYFDFTFTVESTGVLPVLQIVYDAVTVVRRKLQR- A0A3P3ZBD6/18-43_168-177_253-289 ---------TLTFQLNEVDSSFANALRRVMLAEIPM-PVATVAMRYSKMGYFDFTFVVESTGVLPVLQIVYDAVAVLRKKLQR- A0DID7/22-47_181-190_263-295 --------EKCKFSF-EGDLSIANAIRRVMIAEVPT-PINIATFRHNK-----YIFTVESAGQLKAADIVQKALIVLRKKVDEI #=GC scorecons 000000000444936364947479669996699794075465556755122216475775663755455634753656775440 #=GC scorecons_70 ____________*___*_*_*_*************__*______**_______*_*_**_**_*_____*__*____***____ #=GC scorecons_80 ____________*_____*_*__*__***__**_*____________________*_**____*_______________*____ #=GC scorecons_90 ____________*_____*____*__***__**_*_________________________________________________ //