# STOCKHOLM 1.0 #=GF ID 3.30.1360.10/FF/000010 #=GF DE DNA-directed RNA polymerase subunit alpha #=GF AC 3.30.1360.10/FF/000010 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 17.060 #=GS Q8IKB1/479-508_648-702 AC Q8IKB1 #=GS Q8IKB1/479-508_648-702 OS Plasmodium falciparum 3D7 #=GS Q8IKB1/479-508_648-702 DE DNA-directed RNA polymerase, alpha subunit,putative #=GS Q8IKB1/479-508_648-702 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS Q8IKB1/479-508_648-702 DR GO; GO:0003899; GO:0006351; #=GS Q7RGQ1/412-441_581-635 AC Q7RGQ1 #=GS Q7RGQ1/412-441_581-635 OS Plasmodium yoelii yoelii #=GS Q7RGQ1/412-441_581-635 DE DNA-directed RNA polymerase #=GS Q7RGQ1/412-441_581-635 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia); Plasmodium yoelii; Plasmodium yoelii yoelii; #=GS A0A1A8W2R5/400-429_569-622 AC A0A1A8W2R5 #=GS A0A1A8W2R5/400-429_569-622 OS Plasmodium ovale curtisi #=GS A0A1A8W2R5/400-429_569-622 DE DNA-directed RNA polymerase, alpha subunit, putative #=GS A0A1A8W2R5/400-429_569-622 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium); Plasmodium ovale; Plasmodium ovale curtisi; #=GS A0A077XGD4/414-443_583-637 AC A0A077XGD4 #=GS A0A077XGD4/414-443_583-637 OS Plasmodium berghei ANKA #=GS A0A077XGD4/414-443_583-637 DE DNA-directed RNA polymerase, alpha subunit, putative #=GS A0A077XGD4/414-443_583-637 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia); Plasmodium berghei; #=GS A0A151L5Y7/483-512_652-706 AC A0A151L5Y7 #=GS A0A151L5Y7/483-512_652-706 OS Plasmodium reichenowi #=GS A0A151L5Y7/483-512_652-706 DE DNA-directed RNA polymerase, alpha subunit, putative #=GS A0A151L5Y7/483-512_652-706 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; #=GS W7AAZ4/405-434_574-628 AC W7AAZ4 #=GS W7AAZ4/405-434_574-628 OS Plasmodium vinckei petteri #=GS W7AAZ4/405-434_574-628 DE DNA-directed RNA polymerase subunit alpha #=GS W7AAZ4/405-434_574-628 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia); Plasmodium vinckei; Plasmodium vinckei petteri; #=GS A0A078KH33/412-441_581-635 AC A0A078KH33 #=GS A0A078KH33/412-441_581-635 OS Plasmodium yoelii #=GS A0A078KH33/412-441_581-635 DE DNA-directed RNA polymerase, alpha subunit, putative #=GS A0A078KH33/412-441_581-635 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia); Plasmodium yoelii; #=GS A0A1D3TKQ4/400-429_569-622 AC A0A1D3TKQ4 #=GS A0A1D3TKQ4/400-429_569-622 OS Plasmodium ovale #=GS A0A1D3TKQ4/400-429_569-622 DE DNA-directed RNA polymerase, alpha subunit, putative #=GS A0A1D3TKQ4/400-429_569-622 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium); Plasmodium ovale; #=GS A0A2I0C244/479-508_648-702 AC A0A2I0C244 #=GS A0A2I0C244/479-508_648-702 OS Plasmodium falciparum NF54 #=GS A0A2I0C244/479-508_648-702 DE DNA-directed RNA polymerase #=GS A0A2I0C244/479-508_648-702 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A113SMK3/414-443_583-637 AC A0A113SMK3 #=GS A0A113SMK3/414-443_583-637 OS Plasmodium berghei #=GS A0A113SMK3/414-443_583-637 DE DNA-directed RNA polymerase, alpha subunit, putative #=GS A0A113SMK3/414-443_583-637 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia); Plasmodium berghei; #=GS A0A024X1M2/392-421_561-615 AC A0A024X1M2 #=GS A0A024X1M2/392-421_561-615 OS Plasmodium falciparum CAMP/Malaysia #=GS A0A024X1M2/392-421_561-615 DE Uncharacterized protein #=GS A0A024X1M2/392-421_561-615 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A0L7M2D4/431-460_600-654 AC A0A0L7M2D4 #=GS A0A0L7M2D4/431-460_600-654 OS Plasmodium falciparum Dd2 #=GS A0A0L7M2D4/431-460_600-654 DE Uncharacterized protein #=GS A0A0L7M2D4/431-460_600-654 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W4IYH5/465-494_634-688 AC W4IYH5 #=GS W4IYH5/465-494_634-688 OS Plasmodium falciparum Palo Alto/Uganda #=GS W4IYH5/465-494_634-688 DE Uncharacterized protein #=GS W4IYH5/465-494_634-688 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W7FD78/457-486_626-680 AC W7FD78 #=GS W7FD78/457-486_626-680 OS Plasmodium falciparum 7G8 #=GS W7FD78/457-486_626-680 DE Uncharacterized protein #=GS W7FD78/457-486_626-680 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W7JKY1/160-189_329-383 AC W7JKY1 #=GS W7JKY1/160-189_329-383 OS Plasmodium falciparum NF54 #=GS W7JKY1/160-189_329-383 DE Uncharacterized protein #=GS W7JKY1/160-189_329-383 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W4I7V8/476-505_645-699 AC W4I7V8 #=GS W4I7V8/476-505_645-699 OS Plasmodium falciparum NF135/5.C10 #=GS W4I7V8/476-505_645-699 DE Uncharacterized protein #=GS W4I7V8/476-505_645-699 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A024WGL3/447-476_616-670 AC A0A024WGL3 #=GS A0A024WGL3/447-476_616-670 OS Plasmodium falciparum MaliPS096_E11 #=GS A0A024WGL3/447-476_616-670 DE Uncharacterized protein #=GS A0A024WGL3/447-476_616-670 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W7FQX2/467-496_636-690 AC W7FQX2 #=GS W7FQX2/467-496_636-690 OS Plasmodium falciparum Santa Lucia #=GS W7FQX2/467-496_636-690 DE Uncharacterized protein #=GS W7FQX2/467-496_636-690 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A0L1I6V8/477-506_646-700 AC A0A0L1I6V8 #=GS A0A0L1I6V8/477-506_646-700 OS Plasmodium falciparum IGH-CR14 #=GS A0A0L1I6V8/477-506_646-700 DE DNA-directed RNA polymerase #=GS A0A0L1I6V8/477-506_646-700 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A024VKF0/450-479_619-673 AC A0A024VKF0 #=GS A0A024VKF0/450-479_619-673 OS Plasmodium falciparum FCH/4 #=GS A0A024VKF0/450-479_619-673 DE Uncharacterized protein #=GS A0A024VKF0/450-479_619-673 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS W7JPH3/459-488_628-682 AC W7JPH3 #=GS W7JPH3/459-488_628-682 OS Plasmodium falciparum UGT5.1 #=GS W7JPH3/459-488_628-682 DE Uncharacterized protein #=GS W7JPH3/459-488_628-682 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A1A8WUI0/405-434_574-628 AC A0A1A8WUI0 #=GS A0A1A8WUI0/405-434_574-628 OS Plasmodium ovale curtisi #=GS A0A1A8WUI0/405-434_574-628 DE DNA-directed RNA polymerase, alpha subunit, putative #=GS A0A1A8WUI0/405-434_574-628 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium); Plasmodium ovale; Plasmodium ovale curtisi; #=GS A0A024VYQ5/434-463_603-657 AC A0A024VYQ5 #=GS A0A024VYQ5/434-463_603-657 OS Plasmodium falciparum Tanzania (2000708) #=GS A0A024VYQ5/434-463_603-657 DE Uncharacterized protein #=GS A0A024VYQ5/434-463_603-657 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A024UYW8/464-493_633-687 AC A0A024UYW8 #=GS A0A024UYW8/464-493_633-687 OS Plasmodium falciparum Vietnam Oak-Knoll (FVO) #=GS A0A024UYW8/464-493_633-687 DE Uncharacterized protein #=GS A0A024UYW8/464-493_633-687 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; #=GS A0A060S0G9/473-502_642-696 AC A0A060S0G9 #=GS A0A060S0G9/473-502_642-696 OS Plasmodium reichenowi #=GS A0A060S0G9/473-502_642-696 DE DNA-directed RNA polymerase, alpha subunit, putative #=GS A0A060S0G9/473-502_642-696 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; #=GS V7PXT4/412-441_581-635 AC V7PXT4 #=GS V7PXT4/412-441_581-635 OS Plasmodium yoelii 17X #=GS V7PXT4/412-441_581-635 DE Uncharacterized protein #=GS V7PXT4/412-441_581-635 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia); Plasmodium yoelii; #=GF SQ 26 Q8IKB1/479-508_648-702 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI Q7RGQ1/412-441_581-635 YQKFYIGPLNITDGHTFGSLIKYVCQSQIYSPCRMVRTTVHKIATKYWCEDRCEFTDPKQMLVVEIWTDPRMLPKNVLLYGIKNI A0A1A8W2R5/400-429_569-622 YQKFYIGPLNITDGHTFGSLLKYVCQTQIYSSCRMVRITVHKIATKYWCEDRCEFTDPKQMLVVEIWSDCRMLPKNILLYGIKN- A0A077XGD4/414-443_583-637 YQKFYIGPLNITDGHTFGSLIKYVCQSQIYSPCRMVRITVHKIATKYWCEDRCEFTDPKQMLVVEIWTDPRMLPKNVLLYGIKNI A0A151L5Y7/483-512_652-706 YQKFYLGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI W7AAZ4/405-434_574-628 YQKFYIGPLNITDGHTFGSLIKYVCQSQIYSACRMVRTTVHKIATKYWCEDRCEFTDPKQMLVVEIWTDPRMLPKNVLLYGIKNI A0A078KH33/412-441_581-635 YQKFYIGPLNITDGHTFGSLIKYVCQSQIYSPCRMVRTTVHKIATKYWCEDRCEFTDPKQMLVVEIWTDPRMLPKNVLLYGIKNI A0A1D3TKQ4/400-429_569-622 YQKFYIGPLNITDGHTFGSLLKYVCQTQIYSSCRMVRITVHKIATKYWCEDRCEFTDPKQMLVVEIWSDCRMLPKNILLYGIKN- A0A2I0C244/479-508_648-702 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI A0A113SMK3/414-443_583-637 YQKFYIGPLNITDGHTFGSLIKYVCQSQIYSPCRMVRITVHKIATKYWCEDRCEFTDPKQMLVVEIWTDPRMLPKNVLLYGIKNI A0A024X1M2/392-421_561-615 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI A0A0L7M2D4/431-460_600-654 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI W4IYH5/465-494_634-688 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI W7FD78/457-486_626-680 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI W7JKY1/160-189_329-383 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI W4I7V8/476-505_645-699 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI A0A024WGL3/447-476_616-670 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI W7FQX2/467-496_636-690 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI A0A0L1I6V8/477-506_646-700 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI A0A024VKF0/450-479_619-673 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI W7JPH3/459-488_628-682 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI A0A1A8WUI0/405-434_574-628 YQKFYIGPLNITDGHTFGSLIKYVCQSQIYSACRMVRTTVHKIATKYWCEDRCEFTDPKQMLVVEIWTDPRMLPKNVLLYGIKNI A0A024VYQ5/434-463_603-657 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI A0A024UYW8/464-493_633-687 YQKFYIGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI A0A060S0G9/473-502_642-696 YQKFYLGPLNITDGHTFGSLIKYVCQTQIYGACRMIRLTVHKIATKFWCEDRCEFTDPKQMLVVEIWTDCRMLPKNVLLYGIKNI V7PXT4/412-441_581-635 YQKFYIGPLNITDGHTFGSLIKYVCQSQIYSPCRMVRTTVHKIATKYWCEDRCEFTDPKQMLVVEIWTDPRMLPKNVLLYGIKNI #=GC scorecons 9999989999999999999979999969996599979599999999799999999999999999999795999999799999996 #=GC scorecons_70 ******************************__*****_*******************************_**************_ #=GC scorecons_80 **************************_***__***_*_*******************************_**************_ #=GC scorecons_90 ********************_*****_***__***_*_********_********************_*_******_*******_ //