# STOCKHOLM 1.0
#=GF ID 3.20.20.190/FF/000051
#=GF DE DNA-(Apurinic or apyrimidinic site) lyase 2
#=GF AC 3.20.20.190/FF/000051
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 42.577
#=GS Q9SW43/42-310        AC Q9SW43
#=GS Q9SW43/42-310        OS Arabidopsis thaliana
#=GS Q9SW43/42-310        DE AT4g34920/F11I11_160
#=GS Q9SW43/42-310        DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9SW43/42-310        DR GO; GO:0005829; 
#=GS A0A178UYQ8/42-310    AC A0A178UYQ8
#=GS A0A178UYQ8/42-310    OS Arabidopsis thaliana
#=GS A0A178UYQ8/42-310    DE Uncharacterized protein
#=GS A0A178UYQ8/42-310    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q8S9L7/42-310        AC Q8S9L7
#=GS Q8S9L7/42-310        OS Arabidopsis thaliana
#=GS Q8S9L7/42-310        DE AT4g34920/F11I11_160
#=GS Q8S9L7/42-310        DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A3L6QUW3/928-1196  AC A0A3L6QUW3
#=GS A0A3L6QUW3/928-1196  OS Panicum miliaceum
#=GS A0A3L6QUW3/928-1196  DE Uncharacterized protein
#=GS A0A3L6QUW3/928-1196  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; 
#=GS M4F0R8/42-309        AC M4F0R8
#=GS M4F0R8/42-309        OS Brassica rapa subsp. pekinensis
#=GS M4F0R8/42-309        DE Uncharacterized protein
#=GS M4F0R8/42-309        DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS V4P2P0/42-310        AC V4P2P0
#=GS V4P2P0/42-310        OS Eutrema salsugineum
#=GS V4P2P0/42-310        DE Uncharacterized protein
#=GS V4P2P0/42-310        DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A1J3ET71/42-310    AC A0A1J3ET71
#=GS A0A1J3ET71/42-310    OS Noccaea caerulescens
#=GS A0A1J3ET71/42-310    DE 1-phosphatidylinositol phosphodiesterase
#=GS A0A1J3ET71/42-310    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS R0F6C9/42-310        AC R0F6C9
#=GS R0F6C9/42-310        OS Capsella rubella
#=GS R0F6C9/42-310        DE Uncharacterized protein
#=GS R0F6C9/42-310        DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7MDH6/42-310        AC D7MDH6
#=GS D7MDH6/42-310        OS Arabidopsis lyrata subsp. lyrata
#=GS D7MDH6/42-310        DE Uncharacterized protein
#=GS D7MDH6/42-310        DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A078J4B2/42-310    AC A0A078J4B2
#=GS A0A078J4B2/42-310    OS Brassica napus
#=GS A0A078J4B2/42-310    DE BnaAnng15340D protein
#=GS A0A078J4B2/42-310    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A0D3BL95/42-309    AC A0A0D3BL95
#=GS A0A0D3BL95/42-309    OS Brassica oleracea var. oleracea
#=GS A0A0D3BL95/42-309    DE Uncharacterized protein
#=GS A0A0D3BL95/42-309    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS A0A3P6B4N0/42-309    AC A0A3P6B4N0
#=GS A0A3P6B4N0/42-309    OS Brassica oleracea
#=GS A0A3P6B4N0/42-309    DE Uncharacterized protein
#=GS A0A3P6B4N0/42-309    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; 
#=GS A0A1D6IA11/722-989   AC A0A1D6IA11
#=GS A0A1D6IA11/722-989   OS Zea mays
#=GS A0A1D6IA11/722-989   DE DNA-(Apurinic or apyrimidinic site) lyase 2
#=GS A0A1D6IA11/722-989   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A078FYT4/42-309    AC A0A078FYT4
#=GS A0A078FYT4/42-309    OS Brassica napus
#=GS A0A078FYT4/42-309    DE BnaC03g65700D protein
#=GS A0A078FYT4/42-309    DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A1D6IA12/601-868   AC A0A1D6IA12
#=GS A0A1D6IA12/601-868   OS Zea mays
#=GS A0A1D6IA12/601-868   DE DNA-(Apurinic or apyrimidinic site) lyase 2
#=GS A0A1D6IA12/601-868   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A3L6TAR4/623-891   AC A0A3L6TAR4
#=GS A0A3L6TAR4/623-891   OS Panicum miliaceum
#=GS A0A3L6TAR4/623-891   DE DNA-(Apurinic or apyrimidinic site) lyase 2 isoform X2
#=GS A0A3L6TAR4/623-891   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Panicinae; Panicum; Panicum miliaceum; 
#=GF SQ 16
Q9SW43/42-310                DRKNWMAGLTLEKLTLNKIVWPGTHDSATNDIGIPLISRPLAECQSLSIYEQ-LVLGTRVLDIRVQEDRQICHGILTSYEIDVVIDDVIRFLSETHSEIVILEIRTEFGHKDPPGFETYLADKLG-QFLIHQDDSLFNKPVSEILPKRVICIWKPRESPKPSRGGILWNSDYLKDNWIDTDLPWTKFQSNLKHLSEQQPTSSRKFFYRVENTVTPQADNPVVWVKPVTDRIRKHARLFISQCVSKGCGDKLQILSTDFIEGDFVDACVGLT
A0A178UYQ8/42-310            DRKNWMAGLTLEKLTLNKIVWPGTHDSATNDIGIPLISRPLAECQSLSIYEQ-LVLGTRVLDIRVQEDRQICHGILTSYEIDVVIDDVIRFLSETHSEIVILEIRTEFGHKDPPGFETYLADKLG-QFLIHQDDSLFNKPVSEILPKRVICIWKPRESPKPSRGGILWNSDYLKDNWIDTDLPWTKFQSNLKHLSEQQPTSSRKFFYRVENTVTPQADNPVVWVKPVTDRIRKHARLFISQCVSKGCGDKLQILSTDFIEGDFVDACVGLT
Q8S9L7/42-310                DRKNWMAGLTLEKLTLNKIVWPGTHDSATNDIGIPLISRPLAECQSLSIYEQ-LVLGTRVLDIRVQEDRQICHGILTSYEIDVVIDDVIRFLSETHSEIVILEIRTEFGHKDPPGFETYLADKLG-QFLIHQDDSLFNKPVSEILPKRVICIWKPRESPKPSRGGILWNSDYLKDNWIDTDLPWTKFQSNLKHLSEQQPTSSRKFFYRVENTVTPQADNPVVWVKPVTDRIRKHARLFISQCVSKGCGDKLQILSTDFIEGDFVDACVGLT
A0A3L6QUW3/928-1196          DRKRWMAELGADRVRVHQVVWPGTHDSATNKIGVPLVTRPFAQCQSMSVYEQ-LSMGTRVIDVRIQEERRVCHGILATYPVDVVLDDVRRFLGETESEVVILEVRTEFGHEDPPEFDRFLVDKLGEEHLIPQDEAVFHKTIAELLPRRVICVWKPRKSPAPKPGGPLWSAGYLKDNWIDTDLPETKFESNLKFLGQQPPVAERRFFYRVENTVTPKADNPVLCVWPVTKRIHGYARLFIAEAFAKGLGDKLQVFSTDFIDGDFVDACAGV-
M4F0R8/42-309                DRKNWMAGLDVEKLTLNKIVWPGTHDSATNDIGIPLVSRPLAECQTLSIYDQ-LVLGTRVLDIRVQEDRHICHGILTSYNVDDVINDVIRFLSETHSEIVILEMRTEYGHKDPPEFETYLTDKLG-QFLIQQDDNLFNKAVSEILPKRVICIWKPRESAKPNRGGLLWNSDYLKDNWIDTDLPWKKFQSNLKHLSEQQPISSRKYFYRVENTVTPQADNPVVWVKPVTDRIRKYARLFISQCVAKGCGDKLQILSTDLIEEDFVDACVGF-
V4P2P0/42-310                DRKNWMADLTVEKLTLNKIVWPGTHDSATNEIGIPLISRPLAECQTLSIYEQ-LVLGTRVLDVRVQEDRQICHGILTSYDVDVVIDDVIRFLSETHSEIVILEVRTEYGHKDPPAFETYLVDKLG-QYLIQQDDNLFNKPVSEILPKRVICIWKPRESPKPSRGGLLWNSDYLKDNWIDTDLPWTKFQSNLKHLSEQQPISSRRFFYRVENTVTPKADNPVVWVKPVTDRIRKHARLFISQCVSKGCGDKLQILSTDFIEGDFVDACVGLT
A0A1J3ET71/42-310            DRKNWMAGLEVEKLTLNKIAWPGTHDSATNEIGVPLISRPLAECQTLSIYEQ-LVLGTRVLDIRVQEDRQICHGILTSYDVDVVIEDVIRFLSETHSEIIILEIRTEYGRKDPPEFETYLTDKLG-EFLIQQDDNLFGKTVSEILPKRVICIWKPRESPKPSRGGLLWNSDYLKDNWIDTDLPWTKFQSNLKYLSEQQPISSRRFFYRVENTVTPQTDNPVVWVKPVTDRIRKHARLFISQCVSKGCGDKLQILSTDFIEGDFVDACVGLT
R0F6C9/42-310                DRKNWMAGLTLEKLTLNKIVWPGTHDSATNDIGIPLISRPLAECQTLSIYDQ-LVLGTRVLDIRVQEDRQICHGILTSYDVDVVINDVIRFLSETHSEILILEIRTEFGHKDPPEFETYLSDKLG-EFLIHQDDNLFHKPVSEILPKRVICIWKPRESPKPSRGGILWNSDYLKDNWIDTDLPWTKFQSNLKHLGEQQSISSRKFFYRVENTVTPQADNPVVWVKPVTDRIRKHARLFISQCVAKGCGDKLQILSTDFIDEDFVDACVGLT
D7MDH6/42-310                DRKNWMAGLTLEKLTLNKIVWPGTHDSATNDIGIPLISRPLAECQTLSIYEQ-LVLGTRVLDIRVQEDRQICHGILTSYDVDVVIDDVIRFLSETHSEIVILEIRTEFGHKDPPEFETYLADKLG-QFLIHQDDNLFNKPVSEILPKRVICIWKPRESPKPSRGGILWNSDYLKDNWIDTDLPWTKFQSNLKHLSEQQPISSRKFFYRVENTVTPQADNPVVWVKPVTDRIRKHARLFISQCVSKGCGDKLQILSTDFIEGDFVDACVGLT
A0A078J4B2/42-310            DRKNWMAGLDVEKLTLNKIVWPGTHDSATNDIGIPLVSRPLAECQTLSIYDQLLVLGTRVLDIRVQEDRHICHGILTSYNVDAVIDDVIRFLSETNSEIIILEIRTEYGHKDPPEFETYLTDKLG-QFLIQQDDNLFNKAVSEILPKRVICIWKPRESPKPNRGGLLWNSDYLKDNWIDTDLPWKKFQSNLKHLSEQQPISSRKYFYRVENTVTPQADNPVVWVKPVTDRIRKYARLFISQCVAKGCGDKLQILSTDLIEEDFVDACVGF-
A0A0D3BL95/42-309            DRKNWMAGLDVEKLTLSKIVWPGTHDSATNDIGIPLVSRPLAECQTLSIYDQ-LVLGTRVLDIRVQEDRHICHGILTSYNVDDAIDDVIRFLSETHSEIIILEMRTEYGHKDPPEFETYLADKLG-QFLIQQDDNLFNKAVSEILPKRVICIWKPRESPKPSRGGLLWNSDYLKDNWIDTDLPWKKFQSNLKHLSEQQPISSRKYFYRVENTVTPQADNPVVWVKPVTDRIRKHARLFISQCVAKGCADKLQILSTDLIEEDFVDACVGF-
A0A3P6B4N0/42-309            DRKNWMAGLDVEKLTLSKIVWPGTHDSATNDIGIPLVSRPLAECQTLSIYDQ-LVLGTRVLDIRVQEDRHICHGILTSYNVDDAIDDVIRFLSETHSEIIILEMRTEYGHKDPPEFETYLADKLG-QFLIQQDDNLFNKAVSEILPKRVICIWKPRESPKPSRGGLLWNSDYLKDNWIDTDLPWKKFQSNLKHLSEQQPISSRKYFYRVENTVTPQADNPVVWVKPVTDRIRKHARLFISQCVAKGCADKLQILSTDLIEEDFVDACVGF-
A0A1D6IA11/722-989           DRKRWMAELGADKLRVHQVVWPGTHDSATNKIGVPLVTRPFAQCQSMSVYEQ-LAMGTRVVDVRVQEERRVCHGILATYPVDVVLDDVSRFLSETESELVILEIRTEFGHEDPPGFDRFLADKLG-EHLIPQDEAVFHRTVAELLPRRVICVWKPRKSPPPRPGDPLWSAGYLKDNWIDTDLPETKFESNLKFLGQQPPVAGRRFFYRVENTVTPKADNPVLCVWPVTKRIHGYARLFIAEAFAKGLGDKLQVFSTDFIDGDFVDACAGV-
A0A078FYT4/42-309            DRKNWMAGLDVEKLTLSKIVWPGTHDSATNDIGIPLVSRPLAECQTLSIYDQ-LVLGTRVLDIRVQEDRHICHGILTSYNVDAVIDDVIRFLSETNSEIIILEIRTEYGHKDPPEFETYLADKLG-QFLIQQDDNLFNKAVSEILPKRVICIWKPRESPKPSGGGLLWNSDYLKDNWIDTDLPWKKFQSNLKHLSEQQPISSRKYFYRVENTVTPQADNPVVWVKPVTDRIRKHARLFISQCVAKGCGDKLQILSTDLIEEDFVDACVGF-
A0A1D6IA12/601-868           DRKRWMAELGADKLRVHQVVWPGTHDSATNKIGVPLVTRPFAQCQSMSVYEQ-LAMGTRVVDVRVQEERRVCHGILATYPVDVVLDDVSRFLSETESELVILEIRTEFGHEDPPGFDRFLADKLG-EHLIPQDEAVFHRTVAELLPRRVICVWKPRKSPPPRPGDPLWSAGYLKDNWIDTDLPETKFESNLKFLGQQPPVAGRRFFYRVENTVTPKADNPVLCVWPVTKRIHGYARLFIAEAFAKGLGDKLQVFSTDFIDGDFVDACAGV-
A0A3L6TAR4/623-891           DRKRWMEELGADRVRVHQVVWPGTHDSATSKIGVPLVTRPFAQCQSMSVYEQ-LSMGTRVIDVRVQEERRVCHGILATYPVDVVLDDVRRFLGETESEVVILEVRTEFGHEDPPEFDKFLVDKLGEEHLIPQDEAVFHKTIAELLPRRVICVWKPRKSPAPKPGAPLWSAGYLKDNWIDTDLPETKFESNLKFLGQQPPVADRRFFYRVENTVTPKADNPVLCVWPVTKRIHGYARLFIAEAFAKGLGDKLQVFSTDFIDGDFVDACVGV-
#=GC scorecons               9995997594577756567899999999975997997699696996697979095699996979899795799999669489576799499979959967999699979869995975795999906599599756957576969979999799996984945964996669999999999994699699995966958665977999999999968999966949995996579999966556994799997699979769999996950
#=GC scorecons_70            ***_***_*__***_*_*************_******_*******_******_*_*****_********_*******_*_**_*****_******_**************_***_**_**_****_*_**_***_**_*_*_**************_**_*__*__**___************__*******_*_**_*___********************_*_***_***_******_*__***_**********************__
#=GC scorecons_80            ***_***_*___**_____***********_**_***_**_*_**__*_***_*__****_*_****_*__*****__*_**_*_***_***_**_**__***_******_***_*__**_****___**_**___*_*_*_*_**_****_****_**_*__*__**___************__**_****_*__*_*___*_***********_*****__*_***_**___*****_____**_*****__***_*__******_*__
#=GC scorecons_90            ***_**__*__________**********__**_**__**_*_**__*_*_*_*__****_*_****_*__*****__*__*____**_***_**_**__***_***_**_***_*___*_****___**_**___*_____*_**_****_****_**_*__*__**___************__**_****_*__*_*___*__**********_*****__*_***_**___*****_____**__****__***_*__******_*__
//