# STOCKHOLM 1.0
#=GF ID 3.20.20.150/FF/000039
#=GF DE AP endonuclease, family 2
#=GF AC 3.20.20.150/FF/000039
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 71.823
#=GS Q5JEQ2/13-244     AC Q5JEQ2
#=GS Q5JEQ2/13-244     OS Thermococcus kodakarensis KOD1
#=GS Q5JEQ2/13-244     DE Predicted AP endonuclease
#=GS Q5JEQ2/13-244     DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus kodakarensis; 
#=GS B5YFP0/2-251      AC B5YFP0
#=GS B5YFP0/2-251      OS Thermodesulfovibrio yellowstonii DSM 11347
#=GS B5YFP0/2-251      DE AP endonuclease, family 2
#=GS B5YFP0/2-251      DR ORG; Bacteria; Nitrospirae; Nitrospira; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio; Thermodesulfovibrio yellowstonii; 
#=GS Q746Z6/4-251      AC Q746Z6
#=GS Q746Z6/4-251      OS Geobacter sulfurreducens PCA
#=GS Q746Z6/4-251      DE TIM barrel protein, AP endonuclease family 2/xylose isomerase-like family
#=GS Q746Z6/4-251      DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter; Geobacter sulfurreducens; 
#=GS A0A0D5N648/4-251  AC A0A0D5N648
#=GS A0A0D5N648/4-251  OS Geobacter sulfurreducens
#=GS A0A0D5N648/4-251  DE AP endonuclease
#=GS A0A0D5N648/4-251  DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter; Geobacter sulfurreducens; 
#=GF SQ 4
Q5JEQ2/13-244             ------------------ISGKGFSLDELQVDFVELGFDDSGIIKNEEINWEALKN--LKGIGVEFTLHAPTADGKNLPIDLGVYGKEPVKRMGKVIRIANHLGTEVIVVHGG----DIGKSYTKAYVNTLRHLRKLKPIAEDHGVKLVVENLFEGRIGALPHELLPFVSEGFELCFDIGHAFLTSMNSGLKMDE-FNVLFPYATHLHIHDNNGSRDEHRPLGEGMIGFSYASRVVELTKAERAVLEIRRYSGKGS----------I
B5YFP0/2-251              VKSHIHVPYDKIYDYIDIITRERFNL--------EIYFNSQTLDNISKKDIEKLKKAFFNETSL--SFHAPFMDLSPGAIDSRV-REVTIERFNQIFDIATLLNPKSIVFHSGYEKWKYAFKVDIWLEASLKTWERILPRAEQLKIKIAIENIFEEEPESLRMLVEKISSPYFGICFDTGHFNLFSKKS---IEEWMFCLNDYIVEIHLHDNNKNFDEHLAIGSGCFDFEKFFELFK-NK--NCIYTIEAHSPENVFKSLKMLDKLI
Q746Z6/4-251              -RIHAHVPYPMLADNLTAVAARGINP--------EVHFSGEALDSLVPEKLIAVADT-LNATGLRSTIHAPFVDLNPGSAERLI-REATRHRLNQVIDAAAILRPDVIVFHPGYDRWRYGENQDIWLAHSIETWRRVLERTEPIGCTVAVENIFEEEPSTLRALLEEIDHPRFCHCFDVGHWNLFHTVG---MEEWFDAMGRFVAEAHIHDNFGTRDDHLPLGEGAIDFDLFFSLMA-RHAPQAVWTIEAHCPAALDRALVA----I
A0A0D5N648/4-251          -RIHAHVPYPMLADNLTAVAARGINP--------EVHFSGEALDSLVPEKLIAVADT-LNATGLRSTIHAPFVDLNPGSAERLI-REATRHRLNQVIDAAAILRPDVIVFHPGYDRWRYGENQDIWLAHSIETWRRVLERTEPIGCTVAVENIFEEEPSTLRALLEEIDHPRFCHCFDVGHWNLFHTVG---MEEWFDAMGRFVAEAHIHDNFGTRDDHLPLGEGAIDFDLFFSLMA-RHAPQAVWTIEAHCPAALDRALVA----I
#=GC scorecons            021313333112131211643455550000000095394334643222242355442065356611649994493343456226055353394567545942935459959393223446232443433554445654445932534557996995543494236335244292299949924944325000669352362274453969993544969466959255942443643035414573495465433302131100009
#=GC scorecons_70         __________________*_______________*__*____________________*_________***__*______*__*_______*___*___*__*____**_*_*______________________*_____*_______***_**_____*___*_______*__***_**__*________***_______*____*****____***__**_*___*_______________*__*__*_______________*
#=GC scorecons_80         __________________________________*__*______________________________***__*_________________*_______*__*____**_*_*____________________________*________**_**_____*___________*__***_**__*__________*____________*_***____*_*___*_*___*__________________*__________________*
#=GC scorecons_90         __________________________________*__*______________________________***__*_________________*_______*__*____**_*_*____________________________*________**_**_____*___________*__***_**__*__________*____________*_***____*_*___*_*___*__________________*__________________*
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