# STOCKHOLM 1.0
#=GF ID 3.10.450.580/FF/000005
#=GF DE Mediator of RNA polymerase II transcription subunit 6
#=GF AC 3.10.450.580/FF/000005
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 21.004
#=GS Q8MSX2/6-133       AC Q8MSX2
#=GS Q8MSX2/6-133       OS Drosophila melanogaster
#=GS Q8MSX2/6-133       DE Mediator of RNA polymerase II transcription subunit 6
#=GS Q8MSX2/6-133       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q8MSX2/6-133       DR GO; GO:0003712; GO:0003713; GO:0005515; GO:0005634; GO:0005654; GO:0005737; GO:0006357; GO:0006366; GO:0007406; GO:0016592; GO:0045824; GO:0045944; GO:0050829; 
#=GS E1JIH5/6-133       AC E1JIH5
#=GS E1JIH5/6-133       OS Drosophila melanogaster
#=GS E1JIH5/6-133       DE Mediator of RNA polymerase II transcription subunit 6
#=GS E1JIH5/6-133       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0M5IZW7/9-136   AC A0A0M5IZW7
#=GS A0A0M5IZW7/9-136   OS Drosophila busckii
#=GS A0A0M5IZW7/9-136   DE Mediator of RNA polymerase II transcription subunit 6
#=GS A0A0M5IZW7/9-136   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS B4K995/10-137      AC B4K995
#=GS B4K995/10-137      OS Drosophila mojavensis
#=GS B4K995/10-137      DE Mediator of RNA polymerase II transcription subunit 6
#=GS B4K995/10-137      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B4JV61/10-136      AC B4JV61
#=GS B4JV61/10-136      OS Drosophila grimshawi
#=GS B4JV61/10-136      DE Mediator of RNA polymerase II transcription subunit 6
#=GS B4JV61/10-136      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4HJT2/6-133       AC B4HJT2
#=GS B4HJT2/6-133       OS Drosophila sechellia
#=GS B4HJT2/6-133       DE Mediator of RNA polymerase II transcription subunit 6
#=GS B4HJT2/6-133       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A3B0K516/13-140  AC A0A3B0K516
#=GS A0A3B0K516/13-140  OS Drosophila guanche
#=GS A0A3B0K516/13-140  DE Mediator of RNA polymerase II transcription subunit 6
#=GS A0A3B0K516/13-140  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GS Q299H4/13-140      AC Q299H4
#=GS Q299H4/13-140      OS Drosophila pseudoobscura pseudoobscura
#=GS Q299H4/13-140      DE Mediator of RNA polymerase II transcription subunit 6
#=GS Q299H4/13-140      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4N802/16-143      AC B4N802
#=GS B4N802/16-143      OS Drosophila willistoni
#=GS B4N802/16-143      DE Mediator of RNA polymerase II transcription subunit 6
#=GS B4N802/16-143      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B4LYY0/8-136       AC B4LYY0
#=GS B4LYY0/8-136       OS Drosophila virilis
#=GS B4LYY0/8-136       DE Mediator of RNA polymerase II transcription subunit 6
#=GS B4LYY0/8-136       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4G563/13-140      AC B4G563
#=GS B4G563/13-140      OS Drosophila persimilis
#=GS B4G563/13-140      DE Mediator of RNA polymerase II transcription subunit 6
#=GS B4G563/13-140      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS A0A1W4W0U7/6-133   AC A0A1W4W0U7
#=GS A0A1W4W0U7/6-133   OS Drosophila ficusphila
#=GS A0A1W4W0U7/6-133   DE Mediator of RNA polymerase II transcription subunit 6
#=GS A0A1W4W0U7/6-133   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B3MTX6/6-133       AC B3MTX6
#=GS B3MTX6/6-133       OS Drosophila ananassae
#=GS B3MTX6/6-133       DE Mediator of RNA polymerase II transcription subunit 6
#=GS B3MTX6/6-133       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B3P4R0/6-133       AC B3P4R0
#=GS B3P4R0/6-133       OS Drosophila erecta
#=GS B3P4R0/6-133       DE Mediator of RNA polymerase II transcription subunit 6
#=GS B3P4R0/6-133       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PVF0/6-133       AC B4PVF0
#=GS B4PVF0/6-133       OS Drosophila yakuba
#=GS B4PVF0/6-133       DE Mediator of RNA polymerase II transcription subunit 6
#=GS B4PVF0/6-133       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 15
Q8MSX2/6-133               -MTNDHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHMCNNETVRMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINSRILNTVVNLQSAFEEA-
E1JIH5/6-133               -MTNDHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHMCNNETVRMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINSRILNTVVNLQSAFEEA-
A0A0M5IZW7/9-136           -PQENHLRLSWHDTQMMASLSPQTVMDYFCRKSNPFYDHQCNNETIRMQRLGPEHLHNMLGLEYILLHVAEPILYVIRKQHRYNPSDATPIADYYIIGGTVYKAPDLANVINARILNTVVNLQSAFEEA-
B4K995/10-137              --AENPLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHMCNNETIRMQRLGVEHLHNMLGMEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYQAPDLANVINARILNTVVNLQSAFEEAS
B4JV61/10-136              --PENHLRLSWHDTQMIATLSPQTVMDYFCRKSNPFYDHMCNNETIRMQRLGVEHLHNMLGLEYILLHVAEPILYVIRKQHRHNPAEATPIADYYIIGGTIYKAPDLANVINARVLNTVVNLQSAFEEA-
B4HJT2/6-133               -MTNDHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHMCNNETVRMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINSRILNTVVNLQSAFEEA-
A0A3B0K516/13-140          -APENHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHLCNNETIRMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINARILNTVVNLQSAFEEA-
Q299H4/13-140              -APENHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHLCNNETIRMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINARILNTVVNLQSAFEEA-
B4N802/16-143              -APENHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHVCNNETIRMQRLGPEHLHNMIGTEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINARILNTVVNLQSSFEEA-
B4LYY0/8-136               QAPENHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHMCNNETIRMQRLGVEHLHNMLGMEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINARILNTVVNLQSAFEEA-
B4G563/13-140              -APENHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHLCNNETIRMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINARILNTVVNLQSAFEEA-
A0A1W4W0U7/6-133           -MTNDHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHMCNNETVRMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINARILNTVVNLQSAFEEA-
B3MTX6/6-133               -MANDHLRLSWHDTQMMATLSPQTVMDYFCRRSNPFYEHICNNETIRMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINARILNTVVNLQSAFEEA-
B3P4R0/6-133               -MTNDHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHMCNNETVRMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINARILNTVVNLQSAFEEA-
B4PVF0/6-133               -MTNDHLRLSWHDTQMMATLSPQTVMDYFCRKSNPFYDHMCNNETVRMQRLGPEHLHNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINARILNTVVNLQSAFEEA-
#=GC scorecons             0346679999999999898999999999999899999895999997999999699999969699999999999999999999899789999999999999898999999999798999999999899990
#=GC scorecons_70          ____***********************************_************_****************************************************************************_
#=GC scorecons_80          _____**********************************_************_******_*_*******************************************************************_
#=GC scorecons_90          ______************_********************_*****_******_******_*_***********************_****************_*********_****************_
//