# STOCKHOLM 1.0 #=GF ID 3.10.450.580/FF/000004 #=GF DE Mediator of RNA polymerase II transcription subunit 6 #=GF AC 3.10.450.580/FF/000004 #=GF TP FunFam #=GF DR CATH: v4.3 #=GF DR DOPS: 77.665 #=GS P38782/2-63_103-188 AC P38782 #=GS P38782/2-63_103-188 OS Saccharomyces cerevisiae S288C #=GS P38782/2-63_103-188 DE Mediator of RNA polymerase II transcription subunit 6 #=GS P38782/2-63_103-188 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS P38782/2-63_103-188 DR GO; GO:0003713; GO:0005515; GO:0045944; GO:0051123; GO:0070847; #=GS Q9US45/7-144 AC Q9US45 #=GS Q9US45/7-144 OS Schizosaccharomyces pombe 972h- #=GS Q9US45/7-144 DE Mediator of RNA polymerase II transcription subunit 6 #=GS Q9US45/7-144 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; #=GS Q9US45/7-144 DR GO; GO:0003713; GO:0016592; GO:0060261; #=GS C4YNZ3/1-141 AC C4YNZ3 #=GS C4YNZ3/1-141 OS Candida albicans WO-1 #=GS C4YNZ3/1-141 DE Mediator of RNA polymerase II transcription subunit 6 #=GS C4YNZ3/1-141 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; #=GS A0A1H6PKF0/1-141 AC A0A1H6PKF0 #=GS A0A1H6PKF0/1-141 OS Yarrowia lipolytica #=GS A0A1H6PKF0/1-141 DE Mediator of RNA polymerase II transcription subunit 6 #=GS A0A1H6PKF0/1-141 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS Q75EY3/2-161 AC Q75EY3 #=GS Q75EY3/2-161 OS Eremothecium gossypii ATCC 10895 #=GS Q75EY3/2-161 DE Mediator of RNA polymerase II transcription subunit 6 #=GS Q75EY3/2-161 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; #=GS R9X7W7/2-163 AC R9X7W7 #=GS R9X7W7/2-163 OS Saccharomycetaceae sp. 'Ashbya aceri' #=GS R9X7W7/2-163 DE Mediator of RNA polymerase II transcription subunit 6 #=GS R9X7W7/2-163 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; #=GS C5M9T3/1-141 AC C5M9T3 #=GS C5M9T3/1-141 OS Candida tropicalis MYA-3404 #=GS C5M9T3/1-141 DE Mediator of RNA polymerase II transcription subunit 6 #=GS C5M9T3/1-141 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida tropicalis; #=GS B9WEJ8/1-141 AC B9WEJ8 #=GS B9WEJ8/1-141 OS Candida dubliniensis CD36 #=GS B9WEJ8/1-141 DE Mediator of RNA polymerase II transcription subunit 6 #=GS B9WEJ8/1-141 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida dubliniensis; #=GS H0GHB0/2-63_103-188 AC H0GHB0 #=GS H0GHB0/2-63_103-188 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GHB0/2-63_103-188 DE Mediator of RNA polymerase II transcription subunit 6 #=GS H0GHB0/2-63_103-188 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS A0A0L8VP88/2-63_103-188 AC A0A0L8VP88 #=GS A0A0L8VP88/2-63_103-188 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VP88/2-63_103-188 DE Mediator of RNA polymerase II transcription subunit 6 #=GS A0A0L8VP88/2-63_103-188 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS Q5A2Z1/1-141 AC Q5A2Z1 #=GS Q5A2Z1/1-141 OS Candida albicans SC5314 #=GS Q5A2Z1/1-141 DE Mediator of RNA polymerase II transcription subunit 6 #=GS Q5A2Z1/1-141 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; #=GS A0A1D8PKF2/1-141 AC A0A1D8PKF2 #=GS A0A1D8PKF2/1-141 OS Candida albicans SC5314 #=GS A0A1D8PKF2/1-141 DE Mediator of RNA polymerase II transcription subunit 6 #=GS A0A1D8PKF2/1-141 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida; Candida albicans; #=GS Q6C3T0/1-141 AC Q6C3T0 #=GS Q6C3T0/1-141 OS Yarrowia lipolytica CLIB122 #=GS Q6C3T0/1-141 DE Mediator of RNA polymerase II transcription subunit 6 #=GS Q6C3T0/1-141 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Dipodascaceae; Yarrowia; Yarrowia lipolytica; #=GS N1P9D1/2-63_103-188 AC N1P9D1 #=GS N1P9D1/2-63_103-188 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1P9D1/2-63_103-188 DE Mediator of RNA polymerase II transcription subunit 6 #=GS N1P9D1/2-63_103-188 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C7GTX5/2-63_103-188 AC C7GTX5 #=GS C7GTX5/2-63_103-188 OS Saccharomyces cerevisiae JAY291 #=GS C7GTX5/2-63_103-188 DE Mediator of RNA polymerase II transcription subunit 6 #=GS C7GTX5/2-63_103-188 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LSH7/2-63_103-188 AC B3LSH7 #=GS B3LSH7/2-63_103-188 OS Saccharomyces cerevisiae RM11-1a #=GS B3LSH7/2-63_103-188 DE Mediator of RNA polymerase II transcription subunit 6 #=GS B3LSH7/2-63_103-188 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS G2WFD0/2-63_103-188 AC G2WFD0 #=GS G2WFD0/2-63_103-188 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WFD0/2-63_103-188 DE Mediator of RNA polymerase II transcription subunit 6 #=GS G2WFD0/2-63_103-188 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A6ZSW4/2-63_103-188 AC A6ZSW4 #=GS A6ZSW4/2-63_103-188 OS Saccharomyces cerevisiae YJM789 #=GS A6ZSW4/2-63_103-188 DE Mediator of RNA polymerase II transcription subunit 6 #=GS A6ZSW4/2-63_103-188 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B5VJY6/2-63_103-188 AC B5VJY6 #=GS B5VJY6/2-63_103-188 OS Saccharomyces cerevisiae AWRI1631 #=GS B5VJY6/2-63_103-188 DE Mediator of RNA polymerase II transcription subunit 6 #=GS B5VJY6/2-63_103-188 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GF SQ 19 P38782/2-63_103-188 NVTPLDELQWKSPEWIQVF-GLRTENVLDYFAESPFFDKTSNNQVIKMQRQFSQLNDPN----------------------AAVNLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNNSGVGSAKGPEIIPLQDYYIIGANIYQSPTIFKIVQSRLMSTSYHLNSTLESL- Q9US45/7-144 PSVDLTSIQWRMPEWVQSMGGLRTENVLEYFSQSPFYSHKSNNEMLKMQSQFNALDL--------------------------GDLNSQLKRLTGIQFVIIHERPPFLWVIQKQNRLNEN--------EVKPLTVYFVCNENIYMAPNAYTLLATRMLNATYCFQKALTKIE C4YNZ3/1-141 -MESLDEIQWKSPEFIQER-GLNTNNVLEYFSLSPFYDRTSNNQVLMMQFQYQQIQIPPGVS-------------------FHQYFQSRLSEMTGIEFVIAYTKEPDFWIIRKQKRQDPQ--------NTVTLQDYYIIGANVYQAPRIYDVLSSRLLASVLSIKNSTDL-- A0A1H6PKF0/1-141 -MENLDEVQWRSPEWIQAHQGLRTDNVLDYFAESPFYDRVSNNQVLRMQTQFNQQQT--GQL-------------------TPQHFEQELQKMTGIEFVITHVREPDLWVIKKQNRLNPQ--------QTTPISTYFVINENVYMAPTVAAIMQSRVLSTSMFLKRALEEA- Q75EY3/2-161 SQPPLDELQWKSPEWIQSF-GLRTDNVLDYFSQSPFFDKTSNNHVVKMQQQFSQQMPPAPQTARPKAAPSAERQAIWDRYPAYALLEQELAKLKGIEYVLAHVREPDFWVVRKQRRA---------GDRVTALNDYYIIGANVYQAPTAYSVVQNRLLSTGFHLSAALGA-- R9X7W7/2-163 SQPPLDELQWKSPEWIQSF-GLRTDNVLDYFSQSPFFDKTSNNHVVKMQQQFSQQMPPAPQTARPKAAPSAERQAIWDRYPAYALLEQELAKLKGIEYVLAHVREPDFWVVRKQRRM---------GDRVTALNDYYIIGANVYQAPTAYSVVQNRLLSTGCHLSAALSAIQ C5M9T3/1-141 -MEALDEIQWKSPEFIQER-GLNTNNVLEYFSLSPFYDRTSNNQVLMMQFQYQQIQIPMGMT-------------------FHQYFQTRLSEMTGVEFIIAYTKEPDFWIVRKQKRLDPN--------NTITLQDYYIIGANVYQAPKIYDVLSSRLLASILSLKNSTDL-- B9WEJ8/1-141 -MESLDEIQWKSPEFIQER-GLNTNNVLEYFSLSPFYDRTSNNQVLMMQFQYQQIQIPLGVS-------------------FHQYFQSRLSEMTGIEFVIAYTKEPDFWIIRKQKRQDPQ--------NTLTLQDYYIIGANVYQAPRIYDVLSSRLLASVLSIKNSTDL-- H0GHB0/2-63_103-188 NVTPLDELQWKSPEWIQVF-GLRTENVLDYFAESPFFDKTSNNQVIKMQRQFSQLNDPN----------------------AAVNLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNNSGVGSSKGPEIIPLQDYYIIGANVYQSPTIFKIVQSRLMSTSYHLNSTLESL- A0A0L8VP88/2-63_103-188 NVTPLDELQWKSPEWIQVF-GLRTENVLDYFAESPFFDKTSNNQVIKMQRQFSQLNDPN----------------------AAVNLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNNSGVGSSKGPEIIPLQDYYIIGANVYQSPTIFKIVQSRLMSTSYHLNSTLESL- Q5A2Z1/1-141 -MESLDEIQWKSPEFIQER-GLNTNNVLEYFSLSPFYDRTSNNQVLMMQFQYQQIQIPPGVS-------------------FHQYFQSRLSEMTGIEFVIAYTKEPDFWIIRKQKRQDPQ--------NTVTLQDYYIIGANVYQAPRIYDVLSSRLLASVLSIKNSTDL-- A0A1D8PKF2/1-141 -MESLDEIQWKSPEFIQER-GGNTNNVLEYFSLSPFYDRTSNNQVLMMQFQYQQIQIPPGVS-------------------FHQYFQSRLSEMTGIEFVIAYTKEPDFWIIRKQKRQDPQ--------NTVTLQDYYIIGANVYQAPRIYDVLSSRLLASVLSIKNSTDL-- Q6C3T0/1-141 -MENLDEVQWRSPEWIQAHQGLRTDNVLDYFAESPFYDRVSNNQVLRMQTQFNQQQT--GQL-------------------TPQHFEQELQKMTGIEFVITHVREPDLWVIKKQNRLNPQ--------QTTPISTYFVINENVYMAPTVAAIMQSRVLSTSMFLKRALEEA- N1P9D1/2-63_103-188 NVTPLDELQWKSPEWIQVF-GLRTENVLDYFAESPFFDKTSNNQVIKMQRQFSQLNDPN----------------------AAVNLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNNSGVGSAKGPEIIPLQDYYIIGANIYQSPTIFKIVQSRLMSTSYHLNSTLESL- C7GTX5/2-63_103-188 NVTPLDELQWKSPEWIQVF-GLRTENVLDYFAESPFFDKTSNNQVIKMQRQFSQLNDPN----------------------AAVNLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNNSGVGSSKGPEIIPLQDYYIIGANVYQSPTIFKIVQSRLMSTSYHLNSTLESL- B3LSH7/2-63_103-188 NVTPLDELQWKSPEWIQVF-GLRTENVLDYFAESPFFDKTSNNQVIKMQRQFSQLNDPN----------------------AAVNLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNKSGVGSSKGPEIIPLQDYYIIGANVYQSPTIFKIVQSRLMSTSYHLNSTLESL- G2WFD0/2-63_103-188 NVTPLDELQWKSPEWIQVF-GLRTENVLDYFAESPFFDKTSNNQVIKMQRQFSQLNDPN----------------------AAVNLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNNSGVGSAKGPEIIPLQDYYIIGANVYQSPTIFKIVQSRLMSTSYHLNSTLESL- A6ZSW4/2-63_103-188 NVTPLDELQWKSPEWIQVF-GLRTENVLDYFAESPFFDKTSNNQVIKMQRQFSQLNDPN----------------------AAVNLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNNSGVGSAKGPEIIPLQDYYIIGANVYQSPTIFKIVQSRLMSTSYHLNSTLESL- B5VJY6/2-63_103-188 NVTPLDELQWKSPEWIQVF-GLRTENVLDYFAESPFFDKTSNNQVIKMQRQFSQLNDPN----------------------AAVNLEEELMKLDGTEYVLSSVREPDFWVIRKQRRTNNSGVGSSKGPEIIPLQDYYIIGANVYQSPTIFKIVQSRLMSTSYHLNSTLESL- #=GC scorecons 1444977699779968944098695999799649997866999786599397474435211100000000000000000003344664593664968786555779779777995934331111012155457569777669796695664665697666444644565320 #=GC scorecons_70 ____***_******_**___****_******__************__**_**_*_______________________________*___*__*_*_****___***********_*________________*_*************____*__****_____*________ #=GC scorecons_80 ____***_******_**___**_*_******__*****__*****__**_**_*___________________________________*____*_***____***********_*________________*__****__***__*________**_______________ #=GC scorecons_90 ____*___**__**_**___*__*_***_**__***____***_*__**_*______________________________________*____*_*_*______*__*___**_*___________________*_____*_*__*________*________________ //