# STOCKHOLM 1.0
#=GF ID 3.10.28.10/FF/000020
#=GF DE tRNA-splicing ligase RtcB
#=GF AC 3.10.28.10/FF/000020
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 87.537
#=GS O59245/244-399    AC O59245
#=GS O59245/244-399    OS Pyrococcus horikoshii OT3
#=GS O59245/244-399    DE tRNA-splicing ligase RtcB
#=GS O59245/244-399    DR ORG; Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus; Pyrococcus horikoshii; 
#=GS O59245/244-399    DR GO; GO:0000394; GO:0003972; GO:0019002; GO:0030145; 
#=GS Q7NEB4/319-493    AC Q7NEB4
#=GS Q7NEB4/319-493    OS Gloeobacter violaceus PCC 7421
#=GS Q7NEB4/319-493    DE Gll3966 protein
#=GS Q7NEB4/319-493    DR ORG; Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacteraceae; Gloeobacter; Gloeobacter violaceus; 
#=GS Q58817/1344-1540  AC Q58817
#=GS Q58817/1344-1540  OS Methanocaldococcus jannaschii DSM 2661
#=GS Q58817/1344-1540  DE Replication factor C small subunit
#=GS Q58817/1344-1540  DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus; Methanocaldococcus jannaschii; 
#=GS Q58095/241-444    AC Q58095
#=GS Q58095/241-444    OS Methanocaldococcus jannaschii DSM 2661
#=GS Q58095/241-444    DE tRNA-splicing ligase RtcB
#=GS Q58095/241-444    DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus; Methanocaldococcus jannaschii; 
#=GS H1KX77/734-937    AC H1KX77
#=GS H1KX77/734-937    OS Methanotorris formicicus Mc-S-70
#=GS H1KX77/734-937    DE tRNA-splicing ligase RtcB
#=GS H1KX77/734-937    DR ORG; Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris; Methanotorris formicicus; 
#=GF SQ 5
O59245/244-399            -ILARILGFALANGYISENDN------LTFHGKEEVLREVRKDL-----EELGIEA---------------------IVAEEDKLKVTSREFAFLLEKLGMAHD-------SIPEWIIEGPLWIKRNFLAGLFGANGSIVEFK-GDVPLPITLTHSR---------ELLNDVSRILEGFKVRAKI----KMGKNGSYQLVIEDEDSIRNF------
Q7NEB4/319-493            EQLAYLLGYAYGDGCVGRGATYN----YLSLAVSHTYPNVRDQLAAIIREKFGLTT-KIYSGSGAV---------WNLLVHSANLLDWLKANGLL---------KQKAADLAMPEAILRSPSSVVGAFLSGYFDADGCVRGGKGGYGFDCTSKAFVGAV-------QLLLLAEGIVSNLHTTDRS----RQGWRTIYRLNVCGTEFKRR-------
Q58817/1344-1540          -IFARLLGFIIGDGHLSKSKEGR----ILITATINELEGIKKDL-----EKLGIKASNIIEKDIEHKLDGREIKGKTSF-----IYINNKAFYLLLNFWGVEIGNKTINGYNIPKWIKYGNKFVKREFLRGLFGADGTKPYIK-KYNINGIKLGIRVENISKDKTLEFFEEVKKMLEEFEVESYI-KVSKIDNKNLTELIVKANN--KNYLKYLSR
Q58095/241-444            -IIARLLGFAFGDGSIVKENGDRERLYVAFYGKRETLIKIREDL-----EKLGIKASRIYSRKREVEIRNAYGDEYTSLCEDNSIKITSKAFALFMHKLGMPIGKKTEQIYKIPEWIKKAPKWVKRNFLAGLFGADGSRAVFK-NYTPLPINLTMSKSEELKENILEFLNEIKLLLAEFDIESMIYEIKSLDGRVSYRLAIVGEESIKNFL-----
H1KX77/734-937            -IIARLLGFAYGDGSIVKGNGDRERLYVAFYGKKEVLTKIKEDL-----EKLGIKASKIYSRKREVEIRNAYGDEYTSLCEDNPIKITSKAFALFMHKLGMPIGKKTEQIYKIPEWIKKAPKWVKRNFLAGLFGADRSRVVFK-NYTPLPINLTMSKSVELKENILEFLNEIKLLLKEFEIESMIYEIKSLEGKVSYRLAIVREESIKNFL-----
#=GC scorecons            054956997636693535333130000343353243523664690000096696462252321122110100011133513221534337653663222431233321112379659334633756499495969664222390453333635433221002111265633542563464544250110435253455936234522663200000
#=GC scorecons_70         ___*_*****_***_________________________**__*_____*****_*_________________________________*___**_________________***_*______*___**_*_*****_____*_______*_______________*_*______*__*___________________*_*______*________
#=GC scorecons_80         ___*__***____*_____________________________*_____*__*____________________________________*_______________________*__*______*___**_*_*_*_______*_______________________________________________________*_________________
#=GC scorecons_90         ___*__**_____*_____________________________*_____*__*____________________________________________________________*__*__________**_*_*_*_______*_______________________________________________________*_________________
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