# STOCKHOLM 1.0
#=GF ID 3.10.20.410/FF/000003
#=GF DE Fimbrial outer membrane usher protein
#=GF AC 3.10.20.410/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 36.238
#=GS P33341/44-150      AC P33341
#=GS P33341/44-150      OS Escherichia coli K-12
#=GS P33341/44-150      DE Outer membrane usher protein YehB
#=GS P33341/44-150      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS P33341/44-150      DR GO; GO:0006974; 
#=GS Q8ZNN7/42-153      AC Q8ZNN7
#=GS Q8ZNN7/42-153      OS Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
#=GS Q8ZNN7/42-153      DE Putative outer membrane protein
#=GS Q8ZNN7/42-153      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A236MSS1/44-150  AC A0A236MSS1
#=GS A0A236MSS1/44-150  OS Shigella sonnei
#=GS A0A236MSS1/44-150  DE Outer membrane usher protein YehB
#=GS A0A236MSS1/44-150  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella sonnei; 
#=GS F5N444/44-150      AC F5N444
#=GS F5N444/44-150      OS Shigella flexneri VA-6
#=GS F5N444/44-150      DE Uncharacterized protein
#=GS F5N444/44-150      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS A0A0W4BDB3/42-153  AC A0A0W4BDB3
#=GS A0A0W4BDB3/42-153  OS Salmonella enterica
#=GS A0A0W4BDB3/42-153  DE Fimbrial biogenesis outer membrane usher protein
#=GS A0A0W4BDB3/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; 
#=GS E8XCZ0/42-153      AC E8XCZ0
#=GS E8XCZ0/42-153      OS Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74
#=GS E8XCZ0/42-153      DE Putative outer membrane protein
#=GS E8XCZ0/42-153      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A315GTP0/42-153  AC A0A315GTP0
#=GS A0A315GTP0/42-153  OS Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
#=GS A0A315GTP0/42-153  DE Fimbrial biogenesis outer membrane usher protein
#=GS A0A315GTP0/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3Z2F6U9/42-153  AC A0A3Z2F6U9
#=GS A0A3Z2F6U9/42-153  OS Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1
#=GS A0A3Z2F6U9/42-153  DE Fimbrial biogenesis outer membrane usher protein
#=GS A0A3Z2F6U9/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3V8MNY3/42-153  AC A0A3V8MNY3
#=GS A0A3V8MNY3/42-153  OS Salmonella enterica subsp. enterica serovar Typhimurium str. CFSAN000648
#=GS A0A3V8MNY3/42-153  DE Fimbrial biogenesis outer membrane usher protein
#=GS A0A3V8MNY3/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0U1JLB8/42-153  AC A0A0U1JLB8
#=GS A0A0U1JLB8/42-153  OS Salmonella enterica subsp. enterica serovar Typhimurium str. DT104
#=GS A0A0U1JLB8/42-153  DE Fimbrial usher protein
#=GS A0A0U1JLB8/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0D6FFA4/42-153  AC A0A0D6FFA4
#=GS A0A0D6FFA4/42-153  OS Salmonella enterica subsp. enterica serovar Typhimurium
#=GS A0A0D6FFA4/42-153  DE Fimbrial assembly protein
#=GS A0A0D6FFA4/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0H3ND79/42-153  AC A0A0H3ND79
#=GS A0A0H3ND79/42-153  OS Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
#=GS A0A0H3ND79/42-153  DE Hypothetical outer membrane usher protein
#=GS A0A0H3ND79/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A2T8QRY6/42-153  AC A0A2T8QRY6
#=GS A0A2T8QRY6/42-153  OS Salmonella enterica subsp. enterica serovar 4,12:i:-
#=GS A0A2T8QRY6/42-153  DE Fimbrial biogenesis outer membrane usher protein
#=GS A0A2T8QRY6/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0F6B3K6/42-153  AC A0A0F6B3K6
#=GS A0A0F6B3K6/42-153  OS Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
#=GS A0A0F6B3K6/42-153  DE Putative outer membrane protein
#=GS A0A0F6B3K6/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS Q8Z5C6/42-153      AC Q8Z5C6
#=GS Q8Z5C6/42-153      OS Salmonella enterica subsp. enterica serovar Typhi
#=GS Q8Z5C6/42-153      DE Putative outer membrane usher protein
#=GS Q8Z5C6/42-153      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0T9WI05/42-153  AC A0A0T9WI05
#=GS A0A0T9WI05/42-153  OS Salmonella enterica subsp. enterica serovar Bovismorbificans
#=GS A0A0T9WI05/42-153  DE Fimbrial outer membrane usher protein
#=GS A0A0T9WI05/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3U3IZF6/42-153  AC A0A3U3IZF6
#=GS A0A3U3IZF6/42-153  OS Salmonella enterica subsp. enterica
#=GS A0A3U3IZF6/42-153  DE Fimbrial biogenesis outer membrane usher protein
#=GS A0A3U3IZF6/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3V3EG09/42-153  AC A0A3V3EG09
#=GS A0A3V3EG09/42-153  OS Salmonella enterica subsp. enterica serovar Irumu
#=GS A0A3V3EG09/42-153  DE Fimbrial biogenesis outer membrane usher protein
#=GS A0A3V3EG09/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A3I3G0F5/42-153  AC A0A3I3G0F5
#=GS A0A3I3G0F5/42-153  OS Salmonella enterica
#=GS A0A3I3G0F5/42-153  DE Fimbrial biogenesis outer membrane usher protein
#=GS A0A3I3G0F5/42-153  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; 
#=GS M9GEB5/44-150      AC M9GEB5
#=GS M9GEB5/44-150      OS Escherichia coli MP021561.2
#=GS M9GEB5/44-150      DE Type VII secretion system (T7SS), usher family protein
#=GS M9GEB5/44-150      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A037YI79/44-150  AC A0A037YI79
#=GS A0A037YI79/44-150  OS Escherichia coli
#=GS A0A037YI79/44-150  DE Fimbrial assembly protein
#=GS A0A037YI79/44-150  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A069XTF4/44-150  AC A0A069XTF4
#=GS A0A069XTF4/44-150  OS Escherichia coli 3-373-03_S4_C2
#=GS A0A069XTF4/44-150  DE Type VII secretion system (T7SS), usher family protein
#=GS A0A069XTF4/44-150  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS Q0T330/44-150      AC Q0T330
#=GS Q0T330/44-150      OS Shigella flexneri 5 str. 8401
#=GS Q0T330/44-150      DE Putative outer membrane protein
#=GS Q0T330/44-150      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS A0A0H2V0F7/44-150  AC A0A0H2V0F7
#=GS A0A0H2V0F7/44-150  OS Shigella flexneri
#=GS A0A0H2V0F7/44-150  DE Putative outer membrane protein
#=GS A0A0H2V0F7/44-150  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella flexneri; 
#=GS A0A454A5I8/44-150  AC A0A454A5I8
#=GS A0A454A5I8/44-150  OS Escherichia coli 536
#=GS A0A454A5I8/44-150  DE Hypothetical outer membrane usher protein YehB
#=GS A0A454A5I8/44-150  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GF SQ 25
P33341/44-150              ---IRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNF--ASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERG
Q8ZNN7/42-153              ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A236MSS1/44-150          ---IRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNF--ASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERG
F5N444/44-150              ---IRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNF--ASGKQCLTFEQLVQGGSYSWDIGVFRLDFSVPQAWVEELESGYVPPENWERG
A0A0W4BDB3/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
E8XCZ0/42-153              ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A315GTP0/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A3Z2F6U9/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A3V8MNY3/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A0U1JLB8/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A0D6FFA4/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A0H3ND79/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A2T8QRY6/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A0F6B3K6/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
Q8Z5C6/42-153              ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A0T9WI05/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A3U3IZF6/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A3V3EG09/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
A0A3I3G0F5/42-153          ITNFHLDENKPIPGQYELDIYVNNQWRGKYDIIVADDPGSTCISTELLKNIGVISDGLQPQGATDCIALKDVVRSGGYTFNIGVFRLDLSVPQAYVNEVEAGYVLPENWDRG
M9GEB5/44-150              ---IRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNF--ASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERG
A0A037YI79/44-150          ---IRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNF--ASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERG
A0A069XTF4/44-150          ---IRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNF--ASGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERG
Q0T330/44-150              ---IRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNF--ASGKQCLTFEQLVQGGSYSWDIGVFRLDFSVPQAWVEELESGYVPPENWERG
A0A0H2V0F7/44-150          ---IRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNF--ASGKQCLTFEQLVQGGSYSWDIGVFRLDFSVPQAWVEELESGYVPPENWERG
A0A454A5I8/44-150          ---IRLEDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREMIKRLGINTDNF--ASGKQCLTFKQLIQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERG
#=GC scorecons             2225698796969999769999969999997999596955996959669569758956225665596666568669697569999999699999596969699959999799
#=GC scorecons_70          ____*******************_**********_***__****_*_**_***_**_*_______****__***_*_**_**************_*_***_***_*******
#=GC scorecons_80          _____**_*_*_****__*****_******_***_*_*__**_*_*__*__*__**_________*______*__*_**__*******_*****_*_*_*_***_****_**
#=GC scorecons_90          _____**_*_*_****__*****_******_***_*_*__**_*_*__*__*__**_________*______*__*_*___*******_*****_*_*_*_***_****_**
//