# STOCKHOLM 1.0
#=GF ID 3.10.20.350/FF/000003
#=GF DE ORF1a protein
#=GF AC 3.10.20.350/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 8.190
#=GS K9N7C7/872-962      AC K9N7C7
#=GS K9N7C7/872-962      OS Betacoronavirus England 1
#=GS K9N7C7/872-962      DE Replicase polyprotein 1ab
#=GS K9N7C7/872-962      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS K9N7C7/872-962      DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS M1RUQ1/872-962      AC M1RUQ1
#=GS M1RUQ1/872-962      OS Human betacoronavirus 2c England-Qatar/2012
#=GS M1RUQ1/872-962      DE ORF1a
#=GS M1RUQ1/872-962      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS M1RUQ1/872-962      DR EC; 3.4.19.12; 3.4.22.69; 
#=GS A0A1W6ASU8/874-964  AC A0A1W6ASU8
#=GS A0A1W6ASU8/874-964  OS Bat coronavirus
#=GS A0A1W6ASU8/874-964  DE ORF1a protein
#=GS A0A1W6ASU8/874-964  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Coronavirinae; Bat coronavirus; 
#=GS K9N638/872-962      AC K9N638
#=GS K9N638/872-962      OS Betacoronavirus England 1
#=GS K9N638/872-962      DE Replicase polyprotein 1a
#=GS K9N638/872-962      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS K9N638/872-962      DR EC; 3.4.19.12; 3.4.22.69; 
#=GS A0A0U2GPI9/872-962  AC A0A0U2GPI9
#=GS A0A0U2GPI9/872-962  OS Middle East respiratory syndrome-related coronavirus
#=GS A0A0U2GPI9/872-962  DE Polyprotein ORF1ab
#=GS A0A0U2GPI9/872-962  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS M4STU1/872-962      AC M4STU1
#=GS M4STU1/872-962      OS Human betacoronavirus 2c Jordan-N3/2012
#=GS M4STU1/872-962      DE ORF1ab protein
#=GS M4STU1/872-962      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS K0BWD0/872-962      AC K0BWD0
#=GS K0BWD0/872-962      OS Human betacoronavirus 2c EMC/2012
#=GS K0BWD0/872-962      DE ORF1ab
#=GS K0BWD0/872-962      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS K4LC41/872-962      AC K4LC41
#=GS K4LC41/872-962      OS Human betacoronavirus 2c EMC/2012
#=GS K4LC41/872-962      DE ORF1a
#=GS K4LC41/872-962      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS V9TU12/872-962      AC V9TU12
#=GS V9TU12/872-962      OS Middle East respiratory syndrome-related coronavirus
#=GS V9TU12/872-962      DE Orf1a
#=GS V9TU12/872-962      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS V9TU05/872-962      AC V9TU05
#=GS V9TU05/872-962      OS Middle East respiratory syndrome-related coronavirus
#=GS V9TU05/872-962      DE Orf1a
#=GS V9TU05/872-962      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS W6A941/872-962      AC W6A941
#=GS W6A941/872-962      OS Middle East respiratory syndrome-related coronavirus
#=GS W6A941/872-962      DE ORF1a
#=GS W6A941/872-962      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS W6A0I8/238-328      AC W6A0I8
#=GS W6A0I8/238-328      OS Middle East respiratory syndrome-related coronavirus
#=GS W6A0I8/238-328      DE ORF1a
#=GS W6A0I8/238-328      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS W6A040/238-328      AC W6A040
#=GS W6A040/238-328      OS Middle East respiratory syndrome-related coronavirus
#=GS W6A040/238-328      DE ORF1a
#=GS W6A040/238-328      DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GS A0A2D0YGC2/872-962  AC A0A2D0YGC2
#=GS A0A2D0YGC2/872-962  OS Middle East respiratory syndrome-related coronavirus
#=GS A0A2D0YGC2/872-962  DE 1AB polyprotein
#=GS A0A2D0YGC2/872-962  DR ORG; Viruses; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Merbecovirus; Middle East respiratory syndrome-related coronavirus; 
#=GF SQ 14
K9N7C7/872-962              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
M1RUQ1/872-962              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
A0A1W6ASU8/874-964          VRSVTVEYNIHAVLDALLASSSLRTFVVDKSLSIEEFVDVVKEQVSDLLAKLLRGMPIPDFDLDDFIDTPCYCFNADGDVSWSSTMIFSLH
K9N638/872-962              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
A0A0U2GPI9/872-962          VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
M4STU1/872-962              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
K0BWD0/872-962              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
K4LC41/872-962              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
V9TU12/872-962              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
V9TU05/872-962              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
W6A941/872-962              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWYSTMIFSLH
W6A0I8/238-328              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
W6A040/238-328              VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
A0A2D0YGC2/872-962          VRSVTVEYNIHAVLDTLLASSSLRTFVVDKSLSIEEFADVVKEQVSDLLVKLLRGMPIPDFDLDDFIDAPCYCFNAEGDASWSSTMIFSLH
#=GC scorecons              9999999999999996999999999999999999999599999999999599999999999999999969999999699599799999999
#=GC scorecons_70           ***************_*********************_***********_******************_**********_***********
#=GC scorecons_80           ***************_*********************_***********_******************_*******_**_***********
#=GC scorecons_90           ***************_*********************_***********_******************_*******_**_**_********
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