# STOCKHOLM 1.0
#=GF ID 3.10.20.10/FF/000015
#=GF DE DNAation factor-related protein 4
#=GF AC 3.10.20.10/FF/000015
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 92.623
#=GS 5xpcE00/1-100      AC Q9V3H0
#=GS 5xpcE00/1-100      OS Drosophila melanogaster
#=GS 5xpcE00/1-100      DE DNAation factor-related protein 4
#=GS 5xpcE00/1-100      DR CATH; 5xpc; E:44-130; 
#=GS 5xpcE00/1-100      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS 5xpcE00/1-100      DR GO; GO:0006309; 
#=GS 5xpcD00/1-100      AC Q9V3H0
#=GS 5xpcD00/1-100      OS Drosophila melanogaster
#=GS 5xpcD00/1-100      DE DNAation factor-related protein 4
#=GS 5xpcD00/1-100      DR CATH; 5xpc; D:45-131; 
#=GS 5xpcD00/1-100      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS 5xpcD00/1-100      DR GO; GO:0006309; 
#=GS 5xpcC00/1-100      AC Q9V3H0
#=GS 5xpcC00/1-100      OS Drosophila melanogaster
#=GS 5xpcC00/1-100      DE DNAation factor-related protein 4
#=GS 5xpcC00/1-100      DR CATH; 5xpc; C:45-130; 
#=GS 5xpcC00/1-100      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS 5xpcC00/1-100      DR GO; GO:0006309; 
#=GS 5xpcB00/1-100      AC Q9V3H0
#=GS 5xpcB00/1-100      OS Drosophila melanogaster
#=GS 5xpcB00/1-100      DE DNAation factor-related protein 4
#=GS 5xpcB00/1-100      DR CATH; 5xpc; B:44-131; 
#=GS 5xpcB00/1-100      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS 5xpcB00/1-100      DR GO; GO:0006309; 
#=GS 5xpcA00/1-100      AC Q9V3H0
#=GS 5xpcA00/1-100      OS Drosophila melanogaster
#=GS 5xpcA00/1-100      DE DNAation factor-related protein 4
#=GS 5xpcA00/1-100      DR CATH; 5xpc; A:45-129; 
#=GS 5xpcA00/1-100      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS 5xpcA00/1-100      DR GO; GO:0006309; 
#=GS Q9V3H0/39-135      AC Q9V3H0
#=GS Q9V3H0/39-135      OS Drosophila melanogaster
#=GS Q9V3H0/39-135      DE DNAation factor-related protein 4
#=GS Q9V3H0/39-135      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9V3H0/39-135      DR GO; GO:0006309; 
#=GS Q9NDR2/39-135      AC Q9NDR2
#=GS Q9NDR2/39-135      OS Drosophila melanogaster
#=GS Q9NDR2/39-135      DE Caspase-activated DNase
#=GS Q9NDR2/39-135      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9NDR2/39-135      DR GO; GO:0006309; 
#=GS D6WW09/1-97        AC D6WW09
#=GS D6WW09/1-97        OS Tribolium castaneum
#=GS D6WW09/1-97        DE DNAation factor subunit beta-like Protein
#=GS D6WW09/1-97        DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS Q7Q1Q3/14-110      AC Q7Q1Q3
#=GS Q7Q1Q3/14-110      OS Anopheles gambiae
#=GS Q7Q1Q3/14-110      DE AGAP009681-PA
#=GS Q7Q1Q3/14-110      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles gambiae; 
#=GS C3YR00/1-81        AC C3YR00
#=GS C3YR00/1-81        OS Branchiostoma floridae
#=GS C3YR00/1-81        DE Uncharacterized protein
#=GS C3YR00/1-81        DR ORG; Eukaryota; Metazoa; Chordata; Cephalochordata; Branchiostomidae; Branchiostoma; Branchiostoma floridae; 
#=GS A0A182YFV0/12-109  AC A0A182YFV0
#=GS A0A182YFV0/12-109  OS Anopheles stephensi
#=GS A0A182YFV0/12-109  DE Uncharacterized protein
#=GS A0A182YFV0/12-109  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles stephensi; 
#=GS A0A182R3W6/12-110  AC A0A182R3W6
#=GS A0A182R3W6/12-110  OS Anopheles funestus
#=GS A0A182R3W6/12-110  DE Uncharacterized protein
#=GS A0A182R3W6/12-110  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; funestus group; funestus subgroup; Anopheles funestus; 
#=GS A0A182QKM7/15-110  AC A0A182QKM7
#=GS A0A182QKM7/15-110  OS Anopheles farauti
#=GS A0A182QKM7/15-110  DE Uncharacterized protein
#=GS A0A182QKM7/15-110  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicomorpha; Culicoidea; Culicidae; Anophelinae; Anopheles; Cellia; Anopheles farauti; 
#=GS B4IEI7/39-135      AC B4IEI7
#=GS B4IEI7/39-135      OS Drosophila sechellia
#=GS B4IEI7/39-135      DE GM25684
#=GS B4IEI7/39-135      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4Q4R0/39-135      AC B4Q4R0
#=GS B4Q4R0/39-135      OS Drosophila simulans
#=GS B4Q4R0/39-135      DE GD22074
#=GS B4Q4R0/39-135      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS B4P340/41-135      AC B4P340
#=GS B4P340/41-135      OS Drosophila yakuba
#=GS B4P340/41-135      DE Uncharacterized protein
#=GS B4P340/41-135      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GF SQ 16
5xpcE00/1-100              SRGTAGAPMRGYKVTDNERTRKYGIGANSLEMLIAKAKSKFP--LLEPHLYLA-SDGFEVSDDEYLKSLPAQTLFIVSGPDAVITTDADFEFEKMLEHHHHHH
5xpcD00/1-100              SRGTAGAPMRGYKVTDNERTRKYGIGANSLEMLIAKAKSKFP--LLEPHLYLA-SDGFEVSDDEYLKSLPAQTLFIVSGPDAVITTDADFEFEKMLEHHHHHH
5xpcC00/1-100              SRGTAGAPMRGYKVTDNERTRKYGIGANSLEMLIAKAKSKFP--LLEPHLYLA-SDGFEVSDDEYLKSLPAQTLFIVSGPDAVITTDADFEFEKMLEHHHHHH
5xpcB00/1-100              SRGTAGAPMRGYKVTDNERTRKYGIGANSLEMLIAKAKSKFP--LLEPHLYLA-SDGFEVSDDEYLKSLPAQTLFIVSGPDAVITTDADFEFEKMLEHHHHHH
5xpcA00/1-100              SRGTAGAPMRGYKVTDNERTRKYGIGANSLEMLIAKAKSKFP--LLEPHLYLA-SDGFEVSDDEYLKSLPAQTLFIVSGPDAVITTDADFEFEKMLEHHHHHH
Q9V3H0/39-135              SRGTAGAPMRGYKVTDNERTRKYGIGANSLEMLIAKAKSKFP--LLEPHLYLA-SDGFEVSDDEYLKSLPAQTLFIVSGPDAVITTDADFEFEKMRQQSP---
Q9NDR2/39-135              SRGTAGAPMRGYKVTDNERTRKYGIGANSLEMLIAKAKSKFP--LLELHLYLA-SDGFEVSDDEYLKSLPAQTLFIVSGPDAVITTDADFEFEKMRQQSP---
D6WW09/1-97                ------MATKGFKVTDSERKSRVGIAAKTLDDLKRKTVEKFKLELPPDEIFLQTQDGTLVENDEYFQTLHAQTLLIWVKNGEKAPTDAEILYKTIREVNDEYL
Q7Q1Q3/14-110              ---ASGGPLQGYKVTDVERSRKYGVAADSLRMLRAKASEKFK--IPECRVYLA-QDGVEVTDEDYFRTLPAQILFVVAGKDTIVQTDFELMYNAIKTAHTDLL
C3YR00/1-81                ------MGSKPFKIRSADDSQKYGVAAQDLNDLIAKGCKVLKVPIKGCKICLQ-QDGTLINSREFFQALPPLSVLVFLRKGEKWTGDD---------------
A0A182YFV0/12-109          --TTGGGPLQGYKITDVERSRKYGVAADSLRMLRAKASEKFK--LSECRVYLA-QDGVEVTDEEYFRTLPAQILFVVAAKDTIVKTDFELMYNAIKSAHTDLL
A0A182R3W6/12-110          -KTTGGGPLQGYKITDVERSRKYGVAADSLRMLRAKASEKFK--ISECRVYLA-QDGVEVTDEEYFRTLPAQILFVAASKDTIVKTDFELMYNAIKSAHTDLL
A0A182QKM7/15-110          ----GGLPLQGYKITDVERSRKFGVAADSLRMLRTKASEKFK--IAECRVYLA-QDGVEVTDEEYFRTLPAQTLFVVAGKDTVVKTDFELMYNAIKSAHTDLL
B4IEI7/39-135              STGTPGAPMRGYKVTDNERTRKYGIGANSLEMLIAKAKSKFP--LLELHLYLA-SDGFEVSDDEYLKSLPAQTLFIVSGPDAVITTDADFEFEKMRQQSP---
B4Q4R0/39-135              SRGTSGAPMRGYKVTDNERTRKYGIGANSLEMLIAKAKSKFP--LLELHLYLA-SDGFEVSDDEYLKSLPAQTLFIVSGPDAVITTDADFEFEKMRQQSP---
B4P340/41-135              --RAEGAQMRGYKVTDNERTRKYGIGANSLEMLIAKANGKFP--LPELHLYLA-SDGFEVTDDEYLKSLPAQTLFIVSGPDAVITTDADFEFEKMRQQSP---
#=GC scorecons             1123254545779777487568797695695594696347750063635579605994584668866597775777545464445794543543533233111
#=GC scorecons_70          __________******_**_*****_*_**__*_***__**___*_*___***__**__*_*_***__****_***____*____**________________
#=GC scorecons_80          __________******_**__*_*__*__*__*__*____*_________**___**__*___**___***__*___________**________________
#=GC scorecons_90          ____________*________*_*__*__*__*__*_______________*___**______**___*_________________*________________
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