# STOCKHOLM 1.0
#=GF ID 3.10.10.10/FF/000007
#=GF DE Retrovirus-related Pol polyprotein from transposon 17.6-like Protein
#=GF AC 3.10.10.10/FF/000007
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 100.000
#=GS W4XKQ3/1-31       AC W4XKQ3
#=GS W4XKQ3/1-31       OS Strongylocentrotus purpuratus
#=GS W4XKQ3/1-31       DE Uncharacterized protein
#=GS W4XKQ3/1-31       DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS D2CG41/342-367    AC D2CG41
#=GS D2CG41/342-367    OS Tribolium castaneum
#=GS D2CG41/342-367    DE Uncharacterized protein
#=GS D2CG41/342-367    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS W4XLI5/25-57      AC W4XLI5
#=GS W4XLI5/25-57      OS Strongylocentrotus purpuratus
#=GS W4XLI5/25-57      DE Uncharacterized protein
#=GS W4XLI5/25-57      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4YA29/8-40       AC W4YA29
#=GS W4YA29/8-40       OS Strongylocentrotus purpuratus
#=GS W4YA29/8-40       DE Uncharacterized protein
#=GS W4YA29/8-40       DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4Z3J2/2-29       AC W4Z3J2
#=GS W4Z3J2/2-29       OS Strongylocentrotus purpuratus
#=GS W4Z3J2/2-29       DE Uncharacterized protein
#=GS W4Z3J2/2-29       DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4YNM1/89-119     AC W4YNM1
#=GS W4YNM1/89-119     OS Strongylocentrotus purpuratus
#=GS W4YNM1/89-119     DE Uncharacterized protein
#=GS W4YNM1/89-119     DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4YUC1/546-578    AC W4YUC1
#=GS W4YUC1/546-578    OS Strongylocentrotus purpuratus
#=GS W4YUC1/546-578    DE Uncharacterized protein
#=GS W4YUC1/546-578    DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4Y9J5/15-47      AC W4Y9J5
#=GS W4Y9J5/15-47      OS Strongylocentrotus purpuratus
#=GS W4Y9J5/15-47      DE Uncharacterized protein
#=GS W4Y9J5/15-47      DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS D6WF25/275-307    AC D6WF25
#=GS D6WF25/275-307    OS Tribolium castaneum
#=GS D6WF25/275-307    DE Retrovirus-related Pol polyprotein from transposon 17.6-like Protein
#=GS D6WF25/275-307    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS D6WH09/6-38       AC D6WH09
#=GS D6WH09/6-38       OS Tribolium castaneum
#=GS D6WH09/6-38       DE Transposon Tf2-6 polyprotein-like Protein
#=GS D6WH09/6-38       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS A0A139W8S4/6-38   AC A0A139W8S4
#=GS A0A139W8S4/6-38   OS Tribolium castaneum
#=GS A0A139W8S4/6-38   DE Retrovirus-related Pol polyprotein from transposon 17.6-like Protein
#=GS A0A139W8S4/6-38   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS D7EIC3/249-276    AC D7EIC3
#=GS D7EIC3/249-276    OS Tribolium castaneum
#=GS D7EIC3/249-276    DE Uncharacterized protein
#=GS D7EIC3/249-276    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS W4XYM6/338-370    AC W4XYM6
#=GS W4XYM6/338-370    OS Strongylocentrotus purpuratus
#=GS W4XYM6/338-370    DE Uncharacterized protein
#=GS W4XYM6/338-370    DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS W4YD74/356-382    AC W4YD74
#=GS W4YD74/356-382    OS Strongylocentrotus purpuratus
#=GS W4YD74/356-382    DE Uncharacterized protein
#=GS W4YD74/356-382    DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS D7EKC2/133-166    AC D7EKC2
#=GS D7EKC2/133-166    OS Tribolium castaneum
#=GS D7EKC2/133-166    DE Uncharacterized protein
#=GS D7EKC2/133-166    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS W4Y5Y7/467-499    AC W4Y5Y7
#=GS W4Y5Y7/467-499    OS Strongylocentrotus purpuratus
#=GS W4Y5Y7/467-499    DE Uncharacterized protein
#=GS W4Y5Y7/467-499    DR ORG; Eukaryota; Metazoa; Echinodermata; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus; 
#=GS D7EKJ9/2-29       AC D7EKJ9
#=GS D7EKJ9/2-29       OS Tribolium castaneum
#=GS D7EKJ9/2-29       DE Uncharacterized protein
#=GS D7EKJ9/2-29       DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Coleoptera; Polyphaga; Cucujiformia; Tenebrionoidea; Tenebrionidae; Tribolium; Tribolium castaneum; 
#=GS A0A1D6MYT9/27-59  AC A0A1D6MYT9
#=GS A0A1D6MYT9/27-59  OS Zea mays
#=GS A0A1D6MYT9/27-59  DE OSJNBa0059D20.8-like protein
#=GS A0A1D6MYT9/27-59  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A0A9YH88/20-52  AC A0A0A9YH88
#=GS A0A0A9YH88/20-52  OS Lygus hesperus
#=GS A0A0A9YH88/20-52  DE Transposon Ty3-I Gag-Pol polyprotein
#=GS A0A0A9YH88/20-52  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera; Cimicomorpha; Cimicoidea; Miridae; Mirinae; Mirini; Lygus; Lygus hesperus; 
#=GF SQ 19
W4XKQ3/1-31               --IPVEPCDIPKTAITTP-FGLFEWVCMPFGLRN
D2CG41/342-367            -------ELHPKTAIITP-FGLFEFTRMQFALPN
W4XLI5/25-57              WQVLLTNQAKPLTAFVTP-DGLYQFCTMPFGLVN
W4YA29/8-40               FQVVMDPASVDKTAFRVP-WGLFEFTRMPQGLCN
W4Z3J2/2-29               -----DRESVEKTAFRVQ-WGLYEFLCMPQGLCN
W4YNM1/89-119             HQIPVEPSDIHKT--TIP-LRLFKFVRMPFGLRN
W4YUC1/546-578            HQIPVDPADVHKTAITTP-FGLFEFVRMPFGLRN
W4Y9J5/15-47              HQIPVEPSDIHKTAITTP-FGLFEFVRMLFGLRN
D6WF25/275-307            HQVQMNPDDIEKTAISTE-NGHYEYLRMPFGLKN
D6WH09/6-38               FQVELHPDDREISAFSTP-TGHYEFKRMAMGLRN
A0A139W8S4/6-38           YQMEIEEESKHITAFITP-DGHYEFNRIPFGYVN
D7EIC3/249-276            -----KEDSIHYTASITQ-DGHYEFTRVPFGLTS
W4XYM6/338-370            WQVPLHPNDKEKTAFTTG-TSLYHFNVMPFGLVN
W4YD74/356-382            ------SKDKEKTAFTTG-TGLYQFKVMPFGLVN
D7EKC2/133-166            WQVNIRECDKEYTAFTTPGQGLYEFNVLPFGLCN
W4Y5Y7/467-499            WQIELKEEDQQKTAFSTR-SGHYEYITMPFGLCN
D7EKJ9/2-29               -----NPDDIEKTAFSTE-NRHYEYLRMPFGLKN
A0A1D6MYT9/27-59          HQIRMKPGDEYKTAFKTH-HGHYEFLVMPFGLTN
A0A0A9YH88/20-52          HHIPVDPADVHKTAVITP-FGLFEFVRMPFGLRN
#=GC scorecons            1331234353458844740275767347768838
#=GC scorecons_70         ____________**__*___*_***__*****_*
#=GC scorecons_80         ____________**__*___*_*_*__**_**_*
#=GC scorecons_90         ____________*_________________**_*
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