# STOCKHOLM 1.0
#=GF ID 2.70.20.60/FF/000001
#=GF DE Matrix protein
#=GF AC 2.70.20.60/FF/000001
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 17.892
#=GS P35976/176-329      AC P35976
#=GS P35976/176-329      OS Measles virus strain AIK-C
#=GS P35976/176-329      DE Matrix protein
#=GS P35976/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS P35976/176-329      DR GO; GO:0019064; 
#=GS P06942/176-329      AC P06942
#=GS P06942/176-329      OS Measles virus strain Edmonston
#=GS P06942/176-329      DE Matrix protein
#=GS P06942/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS P06942/176-329      DR GO; GO:0019013; 
#=GS P36356/126-281      AC P36356
#=GS P36356/126-281      OS Measles virus strain Yamagata-1
#=GS P36356/126-281      DE Matrix protein
#=GS P36356/126-281      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS P13844/176-329      AC P13844
#=GS P13844/176-329      OS Measles virus strain HU2
#=GS P13844/176-329      DE Matrix protein
#=GS P13844/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS P18611/176-329      AC P18611
#=GS P18611/176-329      OS Measles virus strain Halle
#=GS P18611/176-329      DE Matrix protein
#=GS P18611/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS P26034/176-329      AC P26034
#=GS P26034/176-329      OS Measles virus strain IP-3-CA
#=GS P26034/176-329      DE Matrix protein
#=GS P26034/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS Q77M45/176-329      AC Q77M45
#=GS Q77M45/176-329      OS Measles virus strain AIK-C
#=GS Q77M45/176-329      DE Matrix protein
#=GS Q77M45/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS Q783Q5/176-329      AC Q783Q5
#=GS Q783Q5/176-329      OS Measles morbillivirus
#=GS Q783Q5/176-329      DE Matrix protein
#=GS Q783Q5/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS Q9W850/176-329      AC Q9W850
#=GS Q9W850/176-329      OS Measles virus strain Ichinose-B95a
#=GS Q9W850/176-329      DE Matrix protein
#=GS Q9W850/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS K9N481/176-329      AC K9N481
#=GS K9N481/176-329      OS Measles virus genotype D4
#=GS K9N481/176-329      DE Matrix protein
#=GS K9N481/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS A0A1Z1ED86/176-329  AC A0A1Z1ED86
#=GS A0A1Z1ED86/176-329  OS Measles virus genotype D9
#=GS A0A1Z1ED86/176-329  DE Matrix protein
#=GS A0A1Z1ED86/176-329  DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS Q786M4/176-329      AC Q786M4
#=GS Q786M4/176-329      OS Measles morbillivirus
#=GS Q786M4/176-329      DE M protein
#=GS Q786M4/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS G5DD76/176-329      AC G5DD76
#=GS G5DD76/176-329      OS Measles virus strain MVi/Texas.USA/4.07
#=GS G5DD76/176-329      DE Matrix protein
#=GS G5DD76/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS G5DD92/176-329      AC G5DD92
#=GS G5DD92/176-329      OS Measles virus strain MVi/California.USA/8.04
#=GS G5DD92/176-329      DE Matrix protein
#=GS G5DD92/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS A0A0M4NF02/176-329  AC A0A0M4NF02
#=GS A0A0M4NF02/176-329  OS Measles virus genotype D8
#=GS A0A0M4NF02/176-329  DE Matrix protein
#=GS A0A0M4NF02/176-329  DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS G5DD44/176-329      AC G5DD44
#=GS G5DD44/176-329      OS Measles virus strain MVi/Florida.USA/19.09
#=GS G5DD44/176-329      DE Matrix protein
#=GS G5DD44/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS G5DD36/176-329      AC G5DD36
#=GS G5DD36/176-329      OS Measles virus strain MVi/New York.USA/26.09/3
#=GS G5DD36/176-329      DE Matrix protein
#=GS G5DD36/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS G5DD52/176-329      AC G5DD52
#=GS G5DD52/176-329      OS Measles virus strain MVi/Virginia.USA/15.09
#=GS G5DD52/176-329      DE Matrix protein
#=GS G5DD52/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS Q83624/176-329      AC Q83624
#=GS Q83624/176-329      OS Measles morbillivirus
#=GS Q83624/176-329      DE Matrix protein
#=GS Q83624/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS Q77M39/176-329      AC Q77M39
#=GS Q77M39/176-329      OS Measles virus strain Moraten
#=GS Q77M39/176-329      DE Matrix protein
#=GS Q77M39/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS A0A2R4LPG1/176-329  AC A0A2R4LPG1
#=GS A0A2R4LPG1/176-329  OS Measles virus genotype A
#=GS A0A2R4LPG1/176-329  DE Matrix protein
#=GS A0A2R4LPG1/176-329  DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS B8PZR3/176-329      AC B8PZR3
#=GS B8PZR3/176-329      OS Measles morbillivirus
#=GS B8PZR3/176-329      DE Matrix protein
#=GS B8PZR3/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS Q9IBY6/176-329      AC Q9IBY6
#=GS Q9IBY6/176-329      OS Measles virus strain Schwarz
#=GS Q9IBY6/176-329      DE Matrix protein
#=GS Q9IBY6/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GS Q8B2W8/176-329      AC Q8B2W8
#=GS Q8B2W8/176-329      OS Measles morbillivirus
#=GS Q8B2W8/176-329      DE Matrix protein
#=GS Q8B2W8/176-329      DR ORG; Viruses; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Morbillivirus; Measles morbillivirus; 
#=GF SQ 24
P35976/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
P06942/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
P36356/126-281              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGDFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHTRSTGKMSKTLHAQLGFKKTSCYPPMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQELRIYDDVIINDDQGV
P13844/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMGINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
P18611/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
P26034/176-329              RMLEFKSVNAVAFKLLVTLRIHKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMNKTLHAQLGFKKTLCYPLMDINEDPNRLLWRSRCKTIRIQAVLQPSVPQEFRIYDDVIINDDQ--
Q77M45/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
Q783Q5/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
Q9W850/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
K9N481/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
A0A1Z1ED86/176-329          RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
Q786M4/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
G5DD76/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
G5DD92/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
A0A0M4NF02/176-329          RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
G5DD44/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
G5DD36/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
G5DD52/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
Q83624/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
Q77M39/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
A0A2R4LPG1/176-329          RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
B8PZR3/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
Q9IBY6/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNTEQLPEATFMVHIGNFRRKKSEVYSADYCKMKIEKMGLVFALGGIGGTSLHIRSTGKMSKTLHAQLGFKKTLCYPLMDINEDLNRLLWRSRCKIVRIQAVLQPSVPQEFRIYDDVIINDDQ--
Q8B2W8/176-329              RMLEFRSVNAVAFNLLVTLRIDKAIGPGKIIDNAEQLPEATSMVHIGNFRRKKSEVHSADHCKMKIEKMGPVPAPGGIGGTSPHTRSTGKMSKTLHAQLGFKKTLCYPLMDINEDPNRLLWRSRCKIARIQAVLQPPVPQELRIYDDAITNDDQ--
#=GC scorecons              999998999999979999999799999999999699999996999997999999997999799999999969696999999969699999979999999999997999798999969999999999769999999979999699999797999900
#=GC scorecons_70           *******************************************************************************************************************_**************************************__
#=GC scorecons_80           *********************************_*******_****************************_*_*_*******_*_*******************_**********_***********_********_****_*****_*_****__
#=GC scorecons_90           *************_*******_***********_*******_*****_********_***_*********_*_*_*******_*_******_************_***_******_**********__********_****_*****_*_****__
//