# STOCKHOLM 1.0
#=GF ID 2.60.40.60/FF/000467
#=GF DE protocadherin-11 X-linked
#=GF AC 2.60.40.60/FF/000467
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 69.768
#=GS T1G0H2/86-194       AC T1G0H2
#=GS T1G0H2/86-194       OS Helobdella robusta
#=GS T1G0H2/86-194       DE Uncharacterized protein
#=GS T1G0H2/86-194       DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS T1FZY4/112-213      AC T1FZY4
#=GS T1FZY4/112-213      OS Helobdella robusta
#=GS T1FZY4/112-213      DE Uncharacterized protein
#=GS T1FZY4/112-213      DR ORG; Eukaryota; Metazoa; Annelida; Clitellata; Hirudinea; Hirudinida; Glossiphoniiformes; Glossiphoniidae; Helobdella; Helobdella robusta; 
#=GS H2XLQ1/124-242      AC H2XLQ1
#=GS H2XLQ1/124-242      OS Ciona intestinalis
#=GS H2XLQ1/124-242      DE Uncharacterized protein
#=GS H2XLQ1/124-242      DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS F6VZT8/67-185       AC F6VZT8
#=GS F6VZT8/67-185       OS Ciona intestinalis
#=GS F6VZT8/67-185       DE Uncharacterized protein
#=GS F6VZT8/67-185       DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GS A0A1W5BLE1/123-241  AC A0A1W5BLE1
#=GS A0A1W5BLE1/123-241  OS Ciona intestinalis
#=GS A0A1W5BLE1/123-241  DE protocadherin-11 X-linked
#=GS A0A1W5BLE1/123-241  DR ORG; Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona; Ciona intestinalis; 
#=GF SQ 5
T1G0H2/86-194               -DNAPQFPHPVFYCNISESAEPNIAKLEIPSAKDADSYQFNIRNFYLEPSS-TVFDLHSE-EVNGEFNL------------KLILKTALDREATNQYNFTVHAVDKGEKM--GSMKVIVNVLDAND
T1FZY4/112-213              NDHTPSFASPVLEFEINESTAPDSA-----SLTNTA-----ISKNSLSPSQLNYFDVDSEIDTSPAFNV------------KIKVTKKLDREVKSVYHLVVSAIDGGGKR--GSVKVVVNVIDAND
H2XLQ1/124-242              -DNTPTFPSPIIVKDISESAFVGTL-IRLDSATDPD-----LGANSIDHYDLTSTDVSSDESPLSYFELLVVENIDGTKIPQLQLVKQLDREVISSYELQLKAIDGGTPSLTGTATIKINVSDSND
F6VZT8/67-185               -DNTPTFPSPIIVKDISESAFVGTL-IRLDSATDPD-----LGANSIDHYDLTSTDVSSDESPLSYFELLVVENIDGTKIPQLQLVKQLDREVISSYELQLKAIDGGTPSLTGTATIKINVSDSND
A0A1W5BLE1/123-241          -DNTPTFPSPIIVKDISESAFVGTL-IRLDSATDPD-----LGANSIDHYDLTSTDVSSDESPLSYFELLVVENIDGTKIPQLQLVKQLDREVISSYELQLKAIDGGTPSLTGTATIKINVSDSND
#=GC scorecons              096693965964225969962444402222955645000005434554543463496396143342956111111111111563635499996363946353979593431195446369939599
#=GC scorecons_70           _*_**_*__**____*_***__________*__*_____________________**_**______*_*_____________*_*___****____*_*___***_*_____*___*_***_*_**
#=GC scorecons_80           _*__*_*__*_____*_**___________*________________________*__*_______*_____________________****____*_____*_*_*_____*______**_*_**
#=GC scorecons_90           _*__*_*__*_____*_**___________*________________________*__*_______*_____________________****____*_____*_*_*_____*______**_*_**
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