# STOCKHOLM 1.0
#=GF ID 2.60.40.60/FF/000305
#=GF DE protocadherin-23 isoform X1
#=GF AC 2.60.40.60/FF/000305
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 53.727
#=GS C6SUV2/243-347      AC C6SUV2
#=GS C6SUV2/243-347      OS Drosophila melanogaster
#=GS C6SUV2/243-347      DE Cadherin 96Cb, isoform C
#=GS C6SUV2/243-347      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS C6SUV2/243-347      DR GO; GO:0005509; GO:0005887; GO:0007424; GO:0016339; GO:0044331; 
#=GS A0A0B4LHM7/243-347  AC A0A0B4LHM7
#=GS A0A0B4LHM7/243-347  OS Drosophila melanogaster
#=GS A0A0B4LHM7/243-347  DE Cadherin 96Cb, isoform D
#=GS A0A0B4LHM7/243-347  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4LHM7/243-347  DR GO; GO:0005509; GO:0005887; GO:0007424; GO:0016339; GO:0044331; 
#=GS Q9VBV6/243-347      AC Q9VBV6
#=GS Q9VBV6/243-347      OS Drosophila melanogaster
#=GS Q9VBV6/243-347      DE Cadherin 96Cb, isoform B
#=GS Q9VBV6/243-347      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VBV6/243-347      DR GO; GO:0005509; GO:0005887; GO:0007424; GO:0016339; GO:0044331; 
#=GS B7PBB6/226-332      AC B7PBB6
#=GS B7PBB6/226-332      OS Ixodes scapularis
#=GS B7PBB6/226-332      DE Protocadherin beta-6, putative
#=GS B7PBB6/226-332      DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS B4JV09/282-386      AC B4JV09
#=GS B4JV09/282-386      OS Drosophila grimshawi
#=GS B4JV09/282-386      DE GH14626
#=GS B4JV09/282-386      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS A0A0M4EMZ3/231-335  AC A0A0M4EMZ3
#=GS A0A0M4EMZ3/231-335  OS Drosophila busckii
#=GS A0A0M4EMZ3/231-335  DE Cad96Cb
#=GS A0A0M4EMZ3/231-335  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS A0A0R3NQH9/243-347  AC A0A0R3NQH9
#=GS A0A0R3NQH9/243-347  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NQH9/243-347  DE Uncharacterized protein, isoform C
#=GS A0A0R3NQH9/243-347  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A0R1EAU5/243-347  AC A0A0R1EAU5
#=GS A0A0R1EAU5/243-347  OS Drosophila yakuba
#=GS A0A0R1EAU5/243-347  DE Uncharacterized protein, isoform C
#=GS A0A0R1EAU5/243-347  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4IJI5/270-370      AC B4IJI5
#=GS B4IJI5/270-370      OS Drosophila sechellia
#=GS B4IJI5/270-370      DE GM17741
#=GS B4IJI5/270-370      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A0R3NK77/243-347  AC A0A0R3NK77
#=GS A0A0R3NK77/243-347  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NK77/243-347  DE Uncharacterized protein, isoform F
#=GS A0A0R3NK77/243-347  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4NJ78/241-345      AC B4NJ78
#=GS B4NJ78/241-345      OS Drosophila willistoni
#=GS B4NJ78/241-345      DE Uncharacterized protein
#=GS B4NJ78/241-345      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS A0A1W4VKX6/243-347  AC A0A1W4VKX6
#=GS A0A1W4VKX6/243-347  OS Drosophila ficusphila
#=GS A0A1W4VKX6/243-347  DE protocadherin-23 isoform X3
#=GS A0A1W4VKX6/243-347  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4PUB2/243-347      AC B4PUB2
#=GS B4PUB2/243-347      OS Drosophila yakuba
#=GS B4PUB2/243-347      DE Uncharacterized protein, isoform B
#=GS B4PUB2/243-347      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A1W4V975/243-347  AC A0A1W4V975
#=GS A0A1W4V975/243-347  OS Drosophila ficusphila
#=GS A0A1W4V975/243-347  DE protocadherin-23 isoform X4
#=GS A0A1W4V975/243-347  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0R3NS37/243-347  AC A0A0R3NS37
#=GS A0A0R3NS37/243-347  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NS37/243-347  DE Uncharacterized protein, isoform D
#=GS A0A0R3NS37/243-347  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS Q293R6/243-347      AC Q293R6
#=GS Q293R6/243-347      OS Drosophila pseudoobscura pseudoobscura
#=GS Q293R6/243-347      DE Uncharacterized protein, isoform B
#=GS Q293R6/243-347      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A1W4V8U2/243-347  AC A0A1W4V8U2
#=GS A0A1W4V8U2/243-347  OS Drosophila ficusphila
#=GS A0A1W4V8U2/243-347  DE protocadherin-23 isoform X2
#=GS A0A1W4V8U2/243-347  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A1W4VMB2/243-347  AC A0A1W4VMB2
#=GS A0A1W4VMB2/243-347  OS Drosophila ficusphila
#=GS A0A1W4VMB2/243-347  DE protocadherin-23 isoform X1
#=GS A0A1W4VMB2/243-347  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B3LWI5/280-384      AC B3LWI5
#=GS B3LWI5/280-384      OS Drosophila ananassae
#=GS B3LWI5/280-384      DE Uncharacterized protein
#=GS B3LWI5/280-384      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GF SQ 19
C6SUV2/243-347              -DDQNPKFQRESYSAEIPADGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
A0A0B4LHM7/243-347          -DDQNPKFQRESYSAEIPADGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
Q9VBV6/243-347              -DDQNPKFQRESYSAEIPADGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
B7PBB6/226-332              ADDQNPRFLAERYFVHLHENPRLGVPLDVKPSKIQAEDPDEEIRAPIKYTFNSDAPEYSYFELHPQTGHVTLQRPLP-EGFALPVTLVVRATQKDNADRFTLTTLTLT
B4JV09/282-386              -DDQNPKFQRESYSAELPADGRAG-ELRMRPEPLKAVDQDEGICAPIQYNI-VQSQDAKYFRVHPHNGIITLLAPIGYADLTHGATLVVKATQIDNPDRYALTTVQLT
A0A0M4EMZ3/231-335          -DDQNPKFQRESYSAELPADGRAG-ELRMRPEPLRAVDQDEGICAPIQYTI-VQSQDTKYFRIHPHSGAITLLTPIGYADLAHGATLVVKATQIDNPDRYALTTVQLT
A0A0R3NQH9/243-347          -DDQNPKFQRESYSAELPNDGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGQITLLTPIGYGEIAHGATLVVKATQIDNPDRYALTTVQLT
A0A0R1EAU5/243-347          -DDQNPKFQRESYSAEIPADGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
B4IJI5/270-370              -----PKFQRESYSAEIPADGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
A0A0R3NK77/243-347          -DDQNPKFQRESYSAELPNDGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGQITLLTPIGYGEIAHGATLVVKATQIDNPDRYALTTVQLT
B4NJ78/241-345              -DDQNPKFQRESYSAELPNDGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHSGVITLLTPIGYADVAHGATLVVKATQIDNPDRYALTTVQLT
A0A1W4VKX6/243-347          -DDQNPKFQRESYSAEIPVDGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSHDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
B4PUB2/243-347              -DDQNPKFQRESYSAEIPADGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
A0A1W4V975/243-347          -DDQNPKFQRESYSAEIPVDGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSHDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
A0A0R3NS37/243-347          -DDQNPKFQRESYSAELPNDGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGQITLLTPIGYGEIAHGATLVVKATQIDNPDRYALTTVQLT
Q293R6/243-347              -DDQNPKFQRESYSAELPNDGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGQITLLTPIGYGEIAHGATLVVKATQIDNPDRYALTTVQLT
A0A1W4V8U2/243-347          -DDQNPKFQRESYSAEIPVDGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSHDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
A0A1W4VMB2/243-347          -DDQNPKFQRESYSAEIPVDGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSHDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
B3LWI5/280-384              -DDQNPKFQRESYSAELPADGRPG-ELRMRPEPLKAVDQDEGICAPIQYTI-VQSQDAKYFRIHPHNGAISLLTPIGYADVANGATLVVKATQIDNPDRYALTTVQLT
#=GC scorecons              077779795595956666365959059567955669596996959996986056657559966997593769559654455845699997999599699769996599
#=GC scorecons_70           _*******__*_*_*_*__*_*_*__*_***__***_*_****_******____*_*__**_****_*_*_*__**_____*__*********_***********_**
#=GC scorecons_80           _*******__*_*________*_*__*__**____*_*_**_*_***_**______*__**__**__*_*_*__*______*___********_**_***_***__**
#=GC scorecons_90           _____*_*__*_*________*_*__*___*____*_*_**_*_***_**_________**__**__*___*__*______*___****_***_**_**__***__**
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