# STOCKHOLM 1.0
#=GF ID 2.60.40.60/FF/000303
#=GF DE Cadherin 96Cb, isoform B
#=GF AC 2.60.40.60/FF/000303
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 20.605
#=GS C6SUV2/356-455      AC C6SUV2
#=GS C6SUV2/356-455      OS Drosophila melanogaster
#=GS C6SUV2/356-455      DE Cadherin 96Cb, isoform C
#=GS C6SUV2/356-455      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS C6SUV2/356-455      DR GO; GO:0005509; GO:0005887; GO:0007424; GO:0016339; GO:0044331; 
#=GS A0A0B4LHM7/356-455  AC A0A0B4LHM7
#=GS A0A0B4LHM7/356-455  OS Drosophila melanogaster
#=GS A0A0B4LHM7/356-455  DE Cadherin 96Cb, isoform D
#=GS A0A0B4LHM7/356-455  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4LHM7/356-455  DR GO; GO:0005509; GO:0005887; GO:0007424; GO:0016339; GO:0044331; 
#=GS Q9VBV6/355-455      AC Q9VBV6
#=GS Q9VBV6/355-455      OS Drosophila melanogaster
#=GS Q9VBV6/355-455      DE Cadherin 96Cb, isoform B
#=GS Q9VBV6/355-455      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VBV6/355-455      DR GO; GO:0005509; GO:0005887; GO:0007424; GO:0016339; GO:0044331; 
#=GS B4KDJ1/341-442      AC B4KDJ1
#=GS B4KDJ1/341-442      OS Drosophila mojavensis
#=GS B4KDJ1/341-442      DE Uncharacterized protein
#=GS B4KDJ1/341-442      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B4JV09/394-494      AC B4JV09
#=GS B4JV09/394-494      OS Drosophila grimshawi
#=GS B4JV09/394-494      DE GH14626
#=GS B4JV09/394-494      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS A0A0R3NQH9/355-455  AC A0A0R3NQH9
#=GS A0A0R3NQH9/355-455  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NQH9/355-455  DE Uncharacterized protein, isoform C
#=GS A0A0R3NQH9/355-455  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A0R1EAU5/355-455  AC A0A0R1EAU5
#=GS A0A0R1EAU5/355-455  OS Drosophila yakuba
#=GS A0A0R1EAU5/355-455  DE Uncharacterized protein, isoform C
#=GS A0A0R1EAU5/355-455  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4IJI5/378-478      AC B4IJI5
#=GS B4IJI5/378-478      OS Drosophila sechellia
#=GS B4IJI5/378-478      DE GM17741
#=GS B4IJI5/378-478      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A0R3NK77/355-455  AC A0A0R3NK77
#=GS A0A0R3NK77/355-455  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NK77/355-455  DE Uncharacterized protein, isoform F
#=GS A0A0R3NK77/355-455  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4NJ78/352-453      AC B4NJ78
#=GS B4NJ78/352-453      OS Drosophila willistoni
#=GS B4NJ78/352-453      DE Uncharacterized protein
#=GS B4NJ78/352-453      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS A0A1W4VKX6/355-455  AC A0A1W4VKX6
#=GS A0A1W4VKX6/355-455  OS Drosophila ficusphila
#=GS A0A1W4VKX6/355-455  DE protocadherin-23 isoform X3
#=GS A0A1W4VKX6/355-455  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4PUB2/355-455      AC B4PUB2
#=GS B4PUB2/355-455      OS Drosophila yakuba
#=GS B4PUB2/355-455      DE Uncharacterized protein, isoform B
#=GS B4PUB2/355-455      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A0Q9WMI2/355-456  AC A0A0Q9WMI2
#=GS A0A0Q9WMI2/355-456  OS Drosophila virilis
#=GS A0A0Q9WMI2/355-456  DE Uncharacterized protein, isoform B
#=GS A0A0Q9WMI2/355-456  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS A0A1W4V975/355-455  AC A0A1W4V975
#=GS A0A1W4V975/355-455  OS Drosophila ficusphila
#=GS A0A1W4V975/355-455  DE protocadherin-23 isoform X4
#=GS A0A1W4V975/355-455  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0R3NS37/355-455  AC A0A0R3NS37
#=GS A0A0R3NS37/355-455  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NS37/355-455  DE Uncharacterized protein, isoform D
#=GS A0A0R3NS37/355-455  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS Q293R6/355-455      AC Q293R6
#=GS Q293R6/355-455      OS Drosophila pseudoobscura pseudoobscura
#=GS Q293R6/355-455      DE Uncharacterized protein, isoform B
#=GS Q293R6/355-455      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A1W4V8U2/355-455  AC A0A1W4V8U2
#=GS A0A1W4V8U2/355-455  OS Drosophila ficusphila
#=GS A0A1W4V8U2/355-455  DE protocadherin-23 isoform X2
#=GS A0A1W4V8U2/355-455  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A1W4VMB2/355-455  AC A0A1W4VMB2
#=GS A0A1W4VMB2/355-455  OS Drosophila ficusphila
#=GS A0A1W4VMB2/355-455  DE protocadherin-23 isoform X1
#=GS A0A1W4VMB2/355-455  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B3LWI5/392-491      AC B3LWI5
#=GS B3LWI5/392-491      OS Drosophila ananassae
#=GS B3LWI5/392-491      DE Uncharacterized protein
#=GS B3LWI5/392-491      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GF SQ 19
C6SUV2/356-455              --STLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLEVIDVNDWEP
A0A0B4LHM7/356-455          --STLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLEVIDVNDWEP
Q9VBV6/355-455              -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLEVIDVNDWEP
B4KDJ1/341-442              -LSSLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIADPINSQFFSIGSLGELVLAKPLDYEKMTKHEFQVIASDGLTNSTTAEVTLEVIDVNDWEP
B4JV09/394-494              -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIVDPINSQFFSVGSLGELVLAKPLDYEKMTKHEFQVVASDGLTNSTSADVTLEVIDVNDWE-
A0A0R3NQH9/355-455          -LSTLSFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLEVIDVNDWEP
A0A0R1EAU5/355-455          -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYIISDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLEVIDVNDWEP
B4IJI5/378-478              -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLEVIDVNDWEP
A0A0R3NK77/355-455          -LSTLSFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLEVIDVNDWEP
B4NJ78/352-453              ELSTLSFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIPDPINSQFFNVGSLGELVLAKPLDYEKMTKHEFQVQATDGMTNTT-AELTLEVIDVNDWEP
A0A1W4VKX6/355-455          -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLDVIDVNDWEP
B4PUB2/355-455              -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYIISDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLEVIDVNDWEP
A0A0Q9WMI2/355-456          -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIADPINSQFFSVGSLGELVLAKPLDYEKMTKHEFQVIASDGLTNSTSADVTLEVIDVNDWEP
A0A1W4V975/355-455          -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLDVIDVNDWEP
A0A0R3NS37/355-455          -LSTLSFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLEVIDVNDWEP
Q293R6/355-455              -LSTLSFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLEVIDVNDWEP
A0A1W4V8U2/355-455          -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLDVIDVNDWEP
A0A1W4VMB2/355-455          -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNST-AELTLDVIDVNDWEP
B3LWI5/392-491              -LSTLAFVQKRFVMRIREDTAVGNRILALPTNKPGKHLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVQATDGMTNST-AELTLEVIDVNDWE-
#=GC scorecons              0797969999999999999999999999999999999999695997999998899999999999999999999999959699799890976998999999996
#=GC scorecons_70           _*****************************************_**********************************_*********_**************_
#=GC scorecons_80           __***_**********************************_*_**_*******************************_*_**_****_**_***********_
#=GC scorecons_90           __*_*_**********************************_*_**_*****_*************************_*_**_**_*_*__**_********_
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