# STOCKHOLM 1.0
#=GF ID 2.60.40.60/FF/000284
#=GF DE Cadherin 96Cb, isoform B
#=GF AC 2.60.40.60/FF/000284
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 41.633
#=GS C6SUV2/140-242      AC C6SUV2
#=GS C6SUV2/140-242      OS Drosophila melanogaster
#=GS C6SUV2/140-242      DE Cadherin 96Cb, isoform C
#=GS C6SUV2/140-242      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS C6SUV2/140-242      DR GO; GO:0005509; GO:0005887; GO:0007424; GO:0016339; GO:0044331; 
#=GS A0A0B4LHM7/140-242  AC A0A0B4LHM7
#=GS A0A0B4LHM7/140-242  OS Drosophila melanogaster
#=GS A0A0B4LHM7/140-242  DE Cadherin 96Cb, isoform D
#=GS A0A0B4LHM7/140-242  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0B4LHM7/140-242  DR GO; GO:0005509; GO:0005887; GO:0007424; GO:0016339; GO:0044331; 
#=GS Q9VBV6/140-242      AC Q9VBV6
#=GS Q9VBV6/140-242      OS Drosophila melanogaster
#=GS Q9VBV6/140-242      DE Cadherin 96Cb, isoform B
#=GS Q9VBV6/140-242      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VBV6/140-242      DR GO; GO:0005509; GO:0005887; GO:0007424; GO:0016339; GO:0044331; 
#=GS B7PBB6/123-225      AC B7PBB6
#=GS B7PBB6/123-225      OS Ixodes scapularis
#=GS B7PBB6/123-225      DE Protocadherin beta-6, putative
#=GS B7PBB6/123-225      DR ORG; Eukaryota; Metazoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Ixodinae; Ixodes; Ixodes scapularis; 
#=GS A0A0Q9WF28/125-231  AC A0A0Q9WF28
#=GS A0A0Q9WF28/125-231  OS Drosophila virilis
#=GS A0A0Q9WF28/125-231  DE Uncharacterized protein, isoform C
#=GS A0A0Q9WF28/125-231  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4JV09/178-281      AC B4JV09
#=GS B4JV09/178-281      OS Drosophila grimshawi
#=GS B4JV09/178-281      DE GH14626
#=GS B4JV09/178-281      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS A0A0M4EMZ3/127-230  AC A0A0M4EMZ3
#=GS A0A0M4EMZ3/127-230  OS Drosophila busckii
#=GS A0A0M4EMZ3/127-230  DE Cad96Cb
#=GS A0A0M4EMZ3/127-230  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS A0A0R3NQH9/139-242  AC A0A0R3NQH9
#=GS A0A0R3NQH9/139-242  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NQH9/139-242  DE Uncharacterized protein, isoform C
#=GS A0A0R3NQH9/139-242  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A0R1EAU5/140-242  AC A0A0R1EAU5
#=GS A0A0R1EAU5/140-242  OS Drosophila yakuba
#=GS A0A0R1EAU5/140-242  DE Uncharacterized protein, isoform C
#=GS A0A0R1EAU5/140-242  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4IJI5/163-269      AC B4IJI5
#=GS B4IJI5/163-269      OS Drosophila sechellia
#=GS B4IJI5/163-269      DE GM17741
#=GS B4IJI5/163-269      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS A0A0R3NK77/139-242  AC A0A0R3NK77
#=GS A0A0R3NK77/139-242  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NK77/139-242  DE Uncharacterized protein, isoform F
#=GS A0A0R3NK77/139-242  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4NJ78/137-240      AC B4NJ78
#=GS B4NJ78/137-240      OS Drosophila willistoni
#=GS B4NJ78/137-240      DE Uncharacterized protein
#=GS B4NJ78/137-240      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS A0A1W4VKX6/140-242  AC A0A1W4VKX6
#=GS A0A1W4VKX6/140-242  OS Drosophila ficusphila
#=GS A0A1W4VKX6/140-242  DE protocadherin-23 isoform X3
#=GS A0A1W4VKX6/140-242  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4PUB2/140-242      AC B4PUB2
#=GS B4PUB2/140-242      OS Drosophila yakuba
#=GS B4PUB2/140-242      DE Uncharacterized protein, isoform B
#=GS B4PUB2/140-242      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4KDJ1/126-232      AC B4KDJ1
#=GS B4KDJ1/126-232      OS Drosophila mojavensis
#=GS B4KDJ1/126-232      DE Uncharacterized protein
#=GS B4KDJ1/126-232      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B4LZV0/140-246      AC B4LZV0
#=GS B4LZV0/140-246      OS Drosophila virilis
#=GS B4LZV0/140-246      DE Uncharacterized protein, isoform A
#=GS B4LZV0/140-246      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS A0A0Q9WMI2/140-246  AC A0A0Q9WMI2
#=GS A0A0Q9WMI2/140-246  OS Drosophila virilis
#=GS A0A0Q9WMI2/140-246  DE Uncharacterized protein, isoform B
#=GS A0A0Q9WMI2/140-246  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS A0A1W4V975/140-242  AC A0A1W4V975
#=GS A0A1W4V975/140-242  OS Drosophila ficusphila
#=GS A0A1W4V975/140-242  DE protocadherin-23 isoform X4
#=GS A0A1W4V975/140-242  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A0R3NS37/139-242  AC A0A0R3NS37
#=GS A0A0R3NS37/139-242  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3NS37/139-242  DE Uncharacterized protein, isoform D
#=GS A0A0R3NS37/139-242  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS Q293R6/139-242      AC Q293R6
#=GS Q293R6/139-242      OS Drosophila pseudoobscura pseudoobscura
#=GS Q293R6/139-242      DE Uncharacterized protein, isoform B
#=GS Q293R6/139-242      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A1W4V8U2/140-242  AC A0A1W4V8U2
#=GS A0A1W4V8U2/140-242  OS Drosophila ficusphila
#=GS A0A1W4V8U2/140-242  DE protocadherin-23 isoform X2
#=GS A0A1W4V8U2/140-242  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS A0A1W4VMB2/140-242  AC A0A1W4VMB2
#=GS A0A1W4VMB2/140-242  OS Drosophila ficusphila
#=GS A0A1W4VMB2/140-242  DE protocadherin-23 isoform X1
#=GS A0A1W4VMB2/140-242  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B3LWI5/177-279      AC B3LWI5
#=GS B3LWI5/177-279      OS Drosophila ananassae
#=GS B3LWI5/177-279      DE Uncharacterized protein
#=GS B3LWI5/177-279      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GF SQ 23
C6SUV2/140-242              -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSEYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
A0A0B4LHM7/140-242          -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSEYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
Q9VBV6/140-242              -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSEYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
B7PBB6/123-225              PEFQGTPYFLNVSEITVPGTTVMQGIRAVDKDQPGPFSTVEYYVEDGPYSHLLTFESRLEGSLVLKDRLDYETVPRFTVTLRAQDQGNPPQSSHTTLVVVVHD-----
A0A0Q9WF28/125-231          -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAELVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQN
B4JV09/178-281              PQWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAELVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
A0A0M4EMZ3/127-230          PQWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAELVQFLNPLEGTLVLKRALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
A0A0R3NQH9/139-242          PQWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAEFVQFLNPLEGTLVLRKALDYEQLQNFTVKLRAQDQGTPARHSDTLLRVVITDA----
A0A0R1EAU5/140-242          -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSEYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
B4IJI5/163-269              -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSEYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQN
A0A0R3NK77/139-242          PQWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAEFVQFLNPLEGTLVLRKALDYEQLQNFTVKLRAQDQGTPARHSDTLLRVVITDA----
B4NJ78/137-240              PQWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAEFVQFLNPLEGTLVLKKGLDYEQLQNFTVQLRAQDQGTPPKHSDTLLRIVITDA----
A0A1W4VKX6/140-242          -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSDYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
B4PUB2/140-242              -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSEYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
B4KDJ1/126-232              -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAELVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQN
B4LZV0/140-246              -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAELVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQN
A0A0Q9WMI2/140-246          -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAELVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDADDQN
A0A1W4V975/140-242          -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSDYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
A0A0R3NS37/139-242          PQWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAEFVQFLNPLEGTLVLRKALDYEQLQNFTVKLRAQDQGTPARHSDTLLRVVITDA----
Q293R6/139-242              PQWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYAEFVQFLNPLEGTLVLRKALDYEQLQNFTVKLRAQDQGTPARHSDTLLRVVITDA----
A0A1W4V8U2/140-242          -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSDYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
A0A1W4VMB2/140-242          -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSDYVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
B3LWI5/177-279              -QWIGTPYTLTLSEVTVPGTRILQGARAEDADQPGPFSTVEYQVLPGPYSEFVQFLNPLEGTLVLKKALDYEQLQNFTVKLRAQDQGTPPRHSDTLLRVVITDA----
#=GC scorecons              176599996967997999996779969969699999999999695699966576956699969998669999676699969999999697669696958976950000
#=GC scorecons_70           _**_****_*******************_***************__***___***_***********_***********_*****************_*****_____
#=GC scorecons_80           ____****_*__********_****_**_*_***********_*__***_____*___***_****__****____***_*******_**__*_*_*_***_*_____
#=GC scorecons_90           ____****_*__**_*****___**_**_*_***********_*__***_____*___***_***___****____***_*******_*___*_*_*_**__*_____
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