# STOCKHOLM 1.0
#=GF ID 2.60.40.60/FF/000260
#=GF DE Cadherin related family member 4
#=GF AC 2.60.40.60/FF/000260
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 89.100
#=GS H3BJZ2/439-541      AC H3BJZ2
#=GS H3BJZ2/439-541      OS Mus musculus
#=GS H3BJZ2/439-541      DE Cadherin-related family member 4
#=GS H3BJZ2/439-541      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS A6H8M9/444-547      AC A6H8M9
#=GS A6H8M9/444-547      OS Homo sapiens
#=GS A6H8M9/444-547      DE Cadherin-related family member 4
#=GS A6H8M9/444-547      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS W5NA36/456-566      AC W5NA36
#=GS W5NA36/456-566      OS Lepisosteus oculatus
#=GS W5NA36/456-566      DE Uncharacterized protein
#=GS W5NA36/456-566      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Holostei; Semionotiformes; Lepisosteidae; Lepisosteus; Lepisosteus oculatus; 
#=GS G1KGD7/443-548      AC G1KGD7
#=GS G1KGD7/443-548      OS Anolis carolinensis
#=GS G1KGD7/443-548      DE Uncharacterized protein
#=GS G1KGD7/443-548      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Lepidosauria; Squamata; Iguania; Dactyloidae; Anolis; Anolis carolinensis; 
#=GS F7BDS1/254-365      AC F7BDS1
#=GS F7BDS1/254-365      OS Xenopus tropicalis
#=GS F7BDS1/254-365      DE Cadherin related family member 4
#=GS F7BDS1/254-365      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana; Xenopus tropicalis; 
#=GS K7EGL5/85-188       AC K7EGL5
#=GS K7EGL5/85-188       OS Ornithorhynchus anatinus
#=GS K7EGL5/85-188       DE Uncharacterized protein
#=GS K7EGL5/85-188       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus; Ornithorhynchus anatinus; 
#=GS J9NRX3/429-532      AC J9NRX3
#=GS J9NRX3/429-532      OS Canis lupus familiaris
#=GS J9NRX3/429-532      DE Cadherin related family member 4
#=GS J9NRX3/429-532      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GS F1SPR2/445-545      AC F1SPR2
#=GS F1SPR2/445-545      OS Sus scrofa
#=GS F1SPR2/445-545      DE Uncharacterized protein
#=GS F1SPR2/445-545      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; 
#=GS A0A3Q2H9U1/440-544  AC A0A3Q2H9U1
#=GS A0A3Q2H9U1/440-544  OS Equus caballus
#=GS A0A3Q2H9U1/440-544  DE Cadherin related family member 4
#=GS A0A3Q2H9U1/440-544  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS A0A452F6P9/436-538  AC A0A452F6P9
#=GS A0A452F6P9/436-538  OS Capra hircus
#=GS A0A452F6P9/436-538  DE Uncharacterized protein
#=GS A0A452F6P9/436-538  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Capra; Capra hircus; 
#=GS M3X857/443-545      AC M3X857
#=GS M3X857/443-545      OS Felis catus
#=GS M3X857/443-545      DE Uncharacterized protein
#=GS M3X857/443-545      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS G3H8E2/394-497      AC G3H8E2
#=GS G3H8E2/394-497      OS Cricetulus griseus
#=GS G3H8E2/394-497      DE Cadherin-like protein 29
#=GS G3H8E2/394-497      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetulus; Cricetulus griseus; 
#=GS A0A212C9Z5/432-534  AC A0A212C9Z5
#=GS A0A212C9Z5/432-534  OS Cervus elaphus hippelaphus
#=GS A0A212C9Z5/432-534  DE CDHR4
#=GS A0A212C9Z5/432-534  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Cervidae; Cervinae; Cervus; Cervus elaphus; Cervus elaphus hippelaphus; 
#=GS A0A1A6H0E2/459-564  AC A0A1A6H0E2
#=GS A0A1A6H0E2/459-564  OS Neotoma lepida
#=GS A0A1A6H0E2/459-564  DE Uncharacterized protein
#=GS A0A1A6H0E2/459-564  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Neotominae; Neotoma; Neotoma lepida; 
#=GS A0A2K5D6T7/445-547  AC A0A2K5D6T7
#=GS A0A2K5D6T7/445-547  OS Aotus nancymaae
#=GS A0A2K5D6T7/445-547  DE Uncharacterized protein
#=GS A0A2K5D6T7/445-547  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS F1N1M6/436-539      AC F1N1M6
#=GS F1N1M6/436-539      OS Bos taurus
#=GS F1N1M6/436-539      DE Cadherin related family member 4
#=GS F1N1M6/436-539      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS A0A1U8BYW5/445-545  AC A0A1U8BYW5
#=GS A0A1U8BYW5/445-545  OS Mesocricetus auratus
#=GS A0A1U8BYW5/445-545  DE cadherin-related family member 4 isoform X1
#=GS A0A1U8BYW5/445-545  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Mesocricetus; Mesocricetus auratus; 
#=GS A0A2K5S160/444-546  AC A0A2K5S160
#=GS A0A2K5S160/444-546  OS Cebus capucinus imitator
#=GS A0A2K5S160/444-546  DE Uncharacterized protein
#=GS A0A2K5S160/444-546  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Cebinae; Cebus; Cebus capucinus; Cebus capucinus imitator; 
#=GS W5PR08/442-544      AC W5PR08
#=GS W5PR08/442-544      OS Ovis aries
#=GS W5PR08/442-544      DE Uncharacterized protein
#=GS W5PR08/442-544      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis aries; 
#=GS G3R917/445-547      AC G3R917
#=GS G3R917/445-547      OS Gorilla gorilla gorilla
#=GS G3R917/445-547      DE Cadherin related family member 4
#=GS G3R917/445-547      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS A0A2I3TJB3/444-547  AC A0A2I3TJB3
#=GS A0A2I3TJB3/444-547  OS Pan troglodytes
#=GS A0A2I3TJB3/444-547  DE Cadherin related family member 4
#=GS A0A2I3TJB3/444-547  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS A0A2R9AG55/444-547  AC A0A2R9AG55
#=GS A0A2R9AG55/444-547  OS Pan paniscus
#=GS A0A2R9AG55/444-547  DE Uncharacterized protein
#=GS A0A2R9AG55/444-547  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS A0A3Q0CZ77/445-545  AC A0A3Q0CZ77
#=GS A0A3Q0CZ77/445-545  OS Mesocricetus auratus
#=GS A0A3Q0CZ77/445-545  DE cadherin-related family member 4 isoform X2
#=GS A0A3Q0CZ77/445-545  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Mesocricetus; Mesocricetus auratus; 
#=GS A0A2K5D6Z0/445-547  AC A0A2K5D6Z0
#=GS A0A2K5D6Z0/445-547  OS Aotus nancymaae
#=GS A0A2K5D6Z0/445-547  DE Uncharacterized protein
#=GS A0A2K5D6Z0/445-547  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Aotidae; Aotus; Aotus nancymaae; 
#=GS J9NYR4/444-547      AC J9NYR4
#=GS J9NYR4/444-547      OS Canis lupus familiaris
#=GS J9NYR4/444-547      DE Cadherin related family member 4
#=GS J9NYR4/444-547      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GS F6VCF9/440-544      AC F6VCF9
#=GS F6VCF9/440-544      OS Equus caballus
#=GS F6VCF9/440-544      DE Cadherin related family member 4
#=GS F6VCF9/440-544      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS W5PR10/436-538      AC W5PR10
#=GS W5PR10/436-538      OS Ovis aries
#=GS W5PR10/436-538      DE Uncharacterized protein
#=GS W5PR10/436-538      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis aries; 
#=GS A0A2R9AMW5/444-547  AC A0A2R9AMW5
#=GS A0A2R9AMW5/444-547  OS Pan paniscus
#=GS A0A2R9AMW5/444-547  DE Uncharacterized protein
#=GS A0A2R9AMW5/444-547  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan paniscus; 
#=GS H2RER8/444-547      AC H2RER8
#=GS H2RER8/444-547      OS Pan troglodytes
#=GS H2RER8/444-547      DE Cadherin related family member 4
#=GS H2RER8/444-547      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Sarcopterygii; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GF SQ 29
H3BJZ2/439-541              ------CV-PRTFRVQEDTGPHTLLGSIVGTDMDYPRNSLEYYISGG----PSTFAVDRLSGELHLLGPLDYEQQRLYKITILLIDHSQD--WDLNSHRSGSCTITIEVEDVNDHA
A6H8M9/444-547              -----ACA-PRTFRVQEDAAPHTLLGSVVGTDMDYPHDNIEYYTSGG----PTTFAVDRLSGEVHLLGPLDYEQQRLYRLTVLVIDHGQD--QNPNHHLSGSCTITIEVEDVNDHA
W5NA36/456-566              PVFSP-C--PQAMQVNENAPLGTVIGQVNATDRDWPFNNVEYSIAGGAGNNPPKFYIDPRSGEIHVLSHLDYEKQTIYQLKIKAVDMNQDISPDPQMQKTAFCTVTVRVQDEND--
G1KGD7/443-548              ----PQCL-QRSFSVREDAGFGDIFGNASGIDRDYPFNNIEYNILGEETGSSTMFYIGRCTGLLHVLGPLDYEKVKAYHLAISLKD--ID--NGAEGPRSTLCNITINVQDVNDN-
F7BDS1/254-365              --YSPVCNGPYTFFVNENAPFGTVVGQVNATDADYKFNNVEFSIQGG--TNPPVFYINPRNGEINLLGPLDYETTTSYSLNIQVKDLNDDIIPDPINQKTTFCTITINVQDYNDNP
K7EGL5/85-188               ----PRCSPPFTFLVREDALPGHQVGTIHGFDTDYPFNNIDYRISGS----SKLFYLDHRKGQIYLLGPLDYETRRSYTLTISLTDWGQD--QDPTKHLSGSCAVTIEVQDVND--
J9NRX3/429-532              -----ACV-PHTFRIREDAGPYTLLGSVVGMDKDYPHNSIEYFISGG----PSTFSVDRLSGEIHLLGSLDYELQKSYRLTVLVTDHSQD--QDPTQRRSGSCTITIEVEDVNDHS
F1SPR2/445-545              ---------PRTFRVREDAGPYTLLGSVVGTDMDYPHNSIEYYISGW----SATFAVDRLSGEVRLLGPLDYELQKLYRLTVLLTDHSQD--QDPTCNHSGSCTITIEVEDVNDHT
A0A3Q2H9U1/440-544          --FSPACV-SRTFRVREDAGPHTLLGSVVGSDMDYPHDSIEYHTSGG----SATFAVDHLSGEVRLLGSLDYELQRLYRLTVLLTDHSQD--QDATCHHSGSCTITIEVEDVND--
A0A452F6P9/436-538          --FSPTCV-SRTFRVREDARPHTLLGSVVGTDLDYPHDSIEYSTSGG----SAPFAVDRLNGEVRLLGPLDYELQKSYRLTVLLTDHSQD--QDPTCHRSGSCTITIEVEDV----
M3X857/443-545              ------CV-PHKFRIREDAGPHTLLGSVVGMDKDYPHNNIEYYISGG----PTIFSVDRLSGEVHLLGSLDYELQTLYRLNVLLIDYGQD--QDPTHHRSGSCTITIEVEDVNDHA
G3H8E2/394-497              -----ACV-PRTFRVREDAGPLTLLGSIVGTDMDYPHNSLEYYISGG----PSTFAVDRLSGELHLLGPLDYEQQRLYRITVLLIDHSQD--WNLNHHRSGSCTVTIEVEDVNDHA
A0A212C9Z5/432-534          --FSPTCV-SRTFRVREDARPHTLLGSVVGTDMDYPHDSIEYSISGG----SAPFAVDRLSGEVRLLGPLDYELQKSYRLTVLLTDHSQD--QDPTCHRSGSCTITIEVEDV----
A0A1A6H0E2/459-564          --FSPACV-PRTFRVREDAGPHTLLGSIVGTDMDYPRNSLEYYISGG----PSTFAVDRLSGELHLLGPLDYEQQRLYRVIILLIDHSQD--WDLNSHRSGSCTVTIEVEDVNDH-
A0A2K5D6T7/445-547          ------CA-PRMFRVREDAAPHTLLGSVVGMDMDYPHGNIEYYTSGG----PPTFAVDRLSGEVHLLGPLDYEQQRVYRLTVLLIDHGQD--QNPNCHHSGSCTITIEVEDVNDHA
F1N1M6/436-539              --FSPTCV-SRTFRVREDARPHTLLGSVMGTDLDYPHDSIEYSISGG----SAPFAVDSLNGEVHLLGPLDYEMQKSYRLTVLLTDHSQD--QDPTCHRSGSCTITIEVEDVN---
A0A1U8BYW5/445-545          ---------PRTFRVREDAGPHTLLGSIVGTDMDYPPNSLEYYISGA----PPTFAVDRLSGELHLLGPLDYEQQRLYRITILLIDHSQD--WDLNLRRSGSCTITIEVEDVNDHA
A0A2K5S160/444-546          -----ACA-SRMFRVREDAAPHTLLGSVVGTDMDYPHDNIEYYTSGG----PPTFAVDRLSGEVHLLGPLDYEQQRVYRLTVLLIDHGQD--QNPNCHRSGSCTITIEVEDVNDH-
W5PR08/442-544              --FSPTCV-SRTFRVREDARPHTLLGSVVGTDLDYPHNSIEYSTSGG----SAPFAVDRLNGEVRLLGPLDYELQKSYRLTVLLTDHSQD--QDPTCHRSGSCTITIEVEDV----
G3R917/445-547              ------CA-PRTFRVQEDAAPHTLLGSVVGTDMDYPHDNIEYYTSGG----PTTFAVDRLSGEVHLLGPLDYEQQRLYRLTVLVIDHGQD--QNPNHHRSGSCTITIEVEDVNDHA
A0A2I3TJB3/444-547          -----ACA-PRTFRVQEDAAPHTLLGSVVGTDMDYPHDNIEYYTPGG----PTTFAVDRLSGEVHLLGPLDYEQQRLYRLTVLVIDHGQD--QNPNHHRSGSCTITIEVEDVNDHA
A0A2R9AG55/444-547          -----ACA-PRTFRVQEDAAPHTLLGSVVGTDMDYPHDNIEYYTPGG----PTTFAVDRLSGEVHLLGPLDYEQQRLYRLTVLVIDHGQD--QNPNHHRSGSCTITIEVEDVNDHA
A0A3Q0CZ77/445-545          ---------PRTFRVREDAGPHTLLGSIVGTDMDYPPNSLEYYISGA----PPTFAVDRLSGELHLLGPLDYEQQRLYRITILLIDHSQD--WDLNLRRSGSCTITIEVEDVNDHA
A0A2K5D6Z0/445-547          ------CA-PRMFRVREDAAPHTLLGSVVGMDMDYPHGNIEYYTSGG----PPTFAVDRLSGEVHLLGPLDYEQQRVYRLTVLLIDHGQD--QNPNCHHSGSCTITIEVEDVNDHA
J9NYR4/444-547              -----ACV-PHTFRIREDAGPYTLLGSVVGMDKDYPHNSIEYFISGG----PSTFSVDRLSGEIHLLGSLDYELQKSYRLTVLVTDHSQD--QDPTQRRSGSCTITIEVEDVNDHS
F6VCF9/440-544              --FSPACV-SRTFRVREDAGPHTLLGSVVGSDMDYPHDSIEYHTSGG----SATFAVDHLSGEVRLLGSLDYELQRLYRLTVLLTDHSQD--QDATCHHSGSCTITIEVEDVND--
W5PR10/436-538              --FSPTCV-SRTFRVREDARPHTLLGSVVGTDLDYPHNSIEYSTSGG----SAPFAVDRLNGEVRLLGPLDYELQKSYRLTVLLTDHSQD--QDPTCHRSGSCTITIEVEDV----
A0A2R9AMW5/444-547          -----ACA-PRTFRVQEDAAPHTLLGSVVGTDMDYPHDNIEYYTPGG----PTTFAVDRLSGEVHLLGPLDYEQQRLYRLTVLVIDHGQD--QNPNHHRSGSCTITIEVEDVNDHA
H2RER8/444-547              -----ACA-PRTFRVQEDAAPHTLLGSVVGTDMDYPHDNIEYYTPGG----PTTFAVDRLSGEVHLLGPLDYEQQRLYRLTVLVIDHGQD--QNPNHHRSGSCTITIEVEDVNDHA
#=GC scorecons              00112273066685869784657669675759498856668846596000064495776569766798699994654967675649547900566436576697798697976621
#=GC scorecons_70           ______*____**_*_***_*_****_*_*_*_***_*_***_*_**____*__*_**___**_*********_*__*_***_*_*__**___**____**************___
#=GC scorecons_80           ______*_____*_*_***___*__*___*_*_***____**___*________*_**___**__***_****____*_*_*___*__**_________*__*****_*_*_____
#=GC scorecons_90           ____________*_*_*_*______*_____*_**_____**___*________*______*____**_****____*_______*___*____________*__**_*_*_____
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