# STOCKHOLM 1.0
#=GF ID 2.60.40.4200/FF/000001
#=GF DE Genome polyprotein
#=GF AC 2.60.40.4200/FF/000001
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 50.023
#=GS 4ildB03/156-253      AC P19711
#=GS 4ildB03/156-253      OS Bovine viral diarrhea virus 1-NADL
#=GS 4ildB03/156-253      DE Genome polyprotein
#=GS 4ildB03/156-253      DR CATH; 4ild; B:933-1023; 
#=GS 4ildB03/156-253      DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS 4ildB03/156-253      DR GO; GO:0003677; GO:0003723; GO:0005515; GO:0032993; GO:0033592; GO:0043489; GO:0044161; GO:1990814; GO:1990904; 
#=GS 4ildB03/156-253      DR EC; 2.7.7.48; 3.4.21.113; 3.6.1.15; 3.6.4.13; 
#=GS P19712/929-1026      AC P19712
#=GS P19712/929-1026      OS Hog cholera virus (strain Alfort)
#=GS P19712/929-1026      DE Genome polyprotein
#=GS P19712/929-1026      DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; 
#=GS P19712/929-1026      DR GO; GO:0005515; 
#=GS P19712/929-1026      DR EC; 2.7.7.48; 3.4.21.113; 3.6.1.15; 3.6.4.13; 
#=GS 4ildA03/156-253      AC P19711
#=GS 4ildA03/156-253      OS Bovine viral diarrhea virus 1-NADL
#=GS 4ildA03/156-253      DE Genome polyprotein
#=GS 4ildA03/156-253      DR CATH; 4ild; A:933-1023; 
#=GS 4ildA03/156-253      DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS 4ildA03/156-253      DR GO; GO:0003677; GO:0003723; GO:0005515; GO:0032993; GO:0033592; GO:0043489; GO:0044161; GO:1990814; GO:1990904; 
#=GS 4ildA03/156-253      DR EC; 2.7.7.48; 3.4.21.113; 3.6.1.15; 3.6.4.13; 
#=GS P19711/933-1030      AC P19711
#=GS P19711/933-1030      OS Bovine viral diarrhea virus 1-NADL
#=GS P19711/933-1030      DE Genome polyprotein
#=GS P19711/933-1030      DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS P19711/933-1030      DR GO; GO:0003677; GO:0003723; GO:0005515; GO:0032993; GO:0033592; GO:0043489; GO:0044161; GO:1990814; GO:1990904; 
#=GS P19711/933-1030      DR EC; 2.7.7.48; 3.4.21.113; 3.6.1.15; 3.6.4.13; 
#=GS P21530/929-1026      AC P21530
#=GS P21530/929-1026      OS Classical swine fever virus - Brescia
#=GS P21530/929-1026      DE Genome polyprotein
#=GS P21530/929-1026      DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; 
#=GS P21530/929-1026      DR EC; 2.7.7.48; 3.4.21.113; 3.6.1.15; 3.6.4.13; 
#=GS F2X8A1/929-1026      AC F2X8A1
#=GS F2X8A1/929-1026      OS Classical swine fever virus
#=GS F2X8A1/929-1026      DE Genome polyprotein
#=GS F2X8A1/929-1026      DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; 
#=GS F2X8A1/929-1026      DR GO; GO:0005515; 
#=GS Q9YS30/929-1026      AC Q9YS30
#=GS Q9YS30/929-1026      OS Classical swine fever virus
#=GS Q9YS30/929-1026      DE Genome polyprotein
#=GS Q9YS30/929-1026      DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; 
#=GS Q9YS30/929-1026      DR GO; GO:0005515; 
#=GS Q9JGJ1/241-338       AC Q9JGJ1
#=GS Q9JGJ1/241-338       OS Bovine viral diarrhea virus 1
#=GS Q9JGJ1/241-338       DE Structural glycoprotein E2
#=GS Q9JGJ1/241-338       DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A1L7BAR4/241-338   AC A0A1L7BAR4
#=GS A0A1L7BAR4/241-338   OS Bovine viral diarrhea virus 1
#=GS A0A1L7BAR4/241-338   DE E2
#=GS A0A1L7BAR4/241-338   DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A1L7BAR6/241-338   AC A0A1L7BAR6
#=GS A0A1L7BAR6/241-338   OS Bovine viral diarrhea virus 1
#=GS A0A1L7BAR6/241-338   DE E2
#=GS A0A1L7BAR6/241-338   DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A1L7BAS2/241-338   AC A0A1L7BAS2
#=GS A0A1L7BAS2/241-338   OS Bovine viral diarrhea virus 1
#=GS A0A1L7BAS2/241-338   DE E2
#=GS A0A1L7BAS2/241-338   DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A1L7BAS6/241-338   AC A0A1L7BAS6
#=GS A0A1L7BAS6/241-338   OS Bovine viral diarrhea virus 1
#=GS A0A1L7BAS6/241-338   DE E2
#=GS A0A1L7BAS6/241-338   DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A1L7BAS8/241-338   AC A0A1L7BAS8
#=GS A0A1L7BAS8/241-338   OS Bovine viral diarrhea virus 1
#=GS A0A1L7BAS8/241-338   DE E2
#=GS A0A1L7BAS8/241-338   DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A1L7BAS7/241-338   AC A0A1L7BAS7
#=GS A0A1L7BAS7/241-338   OS Bovine viral diarrhea virus 1
#=GS A0A1L7BAS7/241-338   DE E2
#=GS A0A1L7BAS7/241-338   DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A1L7BAR9/241-338   AC A0A1L7BAR9
#=GS A0A1L7BAR9/241-338   OS Bovine viral diarrhea virus 1
#=GS A0A1L7BAR9/241-338   DE E2
#=GS A0A1L7BAR9/241-338   DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS T2D3R1/274-371       AC T2D3R1
#=GS T2D3R1/274-371       OS Bovine viral diarrhea virus 1
#=GS T2D3R1/274-371       DE E2 glycoprotein
#=GS T2D3R1/274-371       DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS Q65466/444-541       AC Q65466
#=GS Q65466/444-541       OS Bovine viral diarrhea virus 1
#=GS Q65466/444-541       DE Polyprotein; structural protein; glycoprotein
#=GS Q65466/444-541       DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A0A8JD05/241-338   AC A0A0A8JD05
#=GS A0A0A8JD05/241-338   OS Bovine viral diarrhea virus 1
#=GS A0A0A8JD05/241-338   DE Structural glycoprotein E2
#=GS A0A0A8JD05/241-338   DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A1M4NES7/933-1030  AC A0A1M4NES7
#=GS A0A1M4NES7/933-1030  OS Bovine viral diarrhea virus 1
#=GS A0A1M4NES7/933-1030  DE Genome polyprotein
#=GS A0A1M4NES7/933-1030  DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A291HHB7/937-1034  AC A0A291HHB7
#=GS A0A291HHB7/937-1034  OS Bovine viral diarrhea virus 1
#=GS A0A291HHB7/937-1034  DE Polyprotein
#=GS A0A291HHB7/937-1034  DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A0H4LW58/933-1030  AC A0A0H4LW58
#=GS A0A0H4LW58/933-1030  OS Bovine viral diarrhea virus 1
#=GS A0A0H4LW58/933-1030  DE Polyprotein
#=GS A0A0H4LW58/933-1030  DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS O71954/933-1030      AC O71954
#=GS O71954/933-1030      OS Bovine viral diarrhea virus strain Bega
#=GS O71954/933-1030      DE Polyprotein
#=GS O71954/933-1030      DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS Q8JMI4/156-253       AC Q8JMI4
#=GS Q8JMI4/156-253       OS Bovine viral diarrhea virus 1
#=GS Q8JMI4/156-253       DE Polyprotein
#=GS Q8JMI4/156-253       DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS A0A2C9C261/933-1030  AC A0A2C9C261
#=GS A0A2C9C261/933-1030  OS Bovine viral diarrhea virus 1
#=GS A0A2C9C261/933-1030  DE Genome polyprotein
#=GS A0A2C9C261/933-1030  DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus A; 
#=GS V5RHX7/240-337       AC V5RHX7
#=GS V5RHX7/240-337       OS Classical swine fever virus
#=GS V5RHX7/240-337       DE Envelope glycoprotein E2
#=GS V5RHX7/240-337       DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; 
#=GS Q5ZN69/263-360       AC Q5ZN69
#=GS Q5ZN69/263-360       OS Classical swine fever virus
#=GS Q5ZN69/263-360       DE Envelope protein
#=GS Q5ZN69/263-360       DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; 
#=GS A0A141ZTI8/240-337   AC A0A141ZTI8
#=GS A0A141ZTI8/240-337   OS Classical swine fever virus
#=GS A0A141ZTI8/240-337   DE E2
#=GS A0A141ZTI8/240-337   DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; 
#=GS Q6QT38/662-759       AC Q6QT38
#=GS Q6QT38/662-759       OS Classical swine fever virus
#=GS Q6QT38/662-759       DE Polyprotein
#=GS Q6QT38/662-759       DR ORG; Viruses; Flaviviridae; Pestivirus; Pestivirus C; 
#=GF SQ 28
4ildB03/156-253              SCNREGVAIVPQGTLKCKIGKTTVQVIAMDTKLGPMPCRPYEIISSEGPVEKTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
P19712/929-1026              DCNRDGVVISTEGEHECLIGNTTVKVHALDERLGPMPCRPKEIVSSEGPVRKTSCTFNYTKTLRNKYYEPRDSYFQQYMLKGEYQYWFNLDVTDHHTD
4ildA03/156-253              SCNREGVAIVPQGTLKCKIGKTTVQVIAMDTKLGPMPCRPYEIISSEGPVEKTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
P19711/933-1030              SCNREGVAIVPQGTLKCKIGKTTVQVIAMDTKLGPMPCRPYEIISSEGPVEKTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
P21530/929-1026              DCNRDGVVISTEGSHECLIGNTTVKVHALDERLGPMPCRPKEIVSSAGPVRKTSCTFNYAKTLRNRYYEPRDSYFQQYMLKGEYQYWFDLDVTDRHSD
F2X8A1/929-1026              DCNRDGVVISAEGSHECLIGNTTVKVHASDERLGPMPCRPKEIVSSAGPVRKTSCTFNYARTLKNKYYEPRDSYFQQYMLKGEYQYWFDLDVTDRHSD
Q9YS30/929-1026              DCNRDGVVISAEGSHECLVGNTTVKVHASDERLGPMPCRPKEIVSSAGPVRKTSCTFNYAKTLKNKYYEPRDSYFQQYMLKGEYQYWFDLDVTDRHSD
Q9JGJ1/241-338               SCNREGVAIVPQGRVKCKIGDTIIQVIALDTKLGPMPCKPYEIISSEGPVEKTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEATDHHRD
A0A1L7BAR4/241-338           SCNREGVAIVPQGTLRCKIGKTTIQVIAMDTKLGPMPCRPYEIISSEGPVERTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
A0A1L7BAR6/241-338           SCNREGVAIVPQGTLRCKIGKTTIQVIAMDTKLGPMPCRPYEIISSEGPVERTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
A0A1L7BAS2/241-338           SCNREGVAIVPQGTLRCKIGKTTIQVIAMDTKLGPMPCRPYEIISSEGPVERTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
A0A1L7BAS6/241-338           SCNREGVAIVPQGTLRCKIGKTTIQVIAMDTKLGPMPCRPYEIISSEGPVERTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
A0A1L7BAS8/241-338           SCNREGVAIVPQGTLRCKIGKTTIQVIAMDTKLGPMPCRPYEIISSEGPVERTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
A0A1L7BAS7/241-338           SCNREGVAIVPQGTLRCKIGKTTIQVIAMDTKLGPMPCRPYEIISSEGPVERTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
A0A1L7BAR9/241-338           SCNREGVAIVPQGTLRCKIGKTTIQVIAMDTKLGPMPCRPYEIISSEGPVERTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
T2D3R1/274-371               SCNREGVAIVPSGVVKCKIGDTIVQVIAMDSKLGPMPCRPHEIIQSEGPVEKTACTFNYTRTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEATDHHRD
Q65466/444-541               SCNREGVAIVPHGQVKCKIGDTIVQVIAMDTKLGPMPCKPHEIISSEGPVEKTACTFNYTRTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEITDHHRD
A0A0A8JD05/241-338           SCNREGVAIVSHGLVKCKIGDTVVQVIALDTKLGPMPCKPHEIIPSEGPVEKTACTFNYTKTLRNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
A0A1M4NES7/933-1030          SCNREGVAIVPTGTVRCRIGDTVVQVIAVDTKLGPMPCKPYEIISSEGPVEKTACTFNYTKTLKNKYFEPRDRYFQQYMLKGEYQYWFDLEASDHHRD
A0A291HHB7/937-1034          SCNREGVAIVPTGQIKCKIGDTIVQVLALDTKLGPMPCKPHEIISSEGPVEKTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
A0A0H4LW58/933-1030          SCNREGVAIVPTGQVKCKIGDTIVQVIALDTKLGPMPCKPHEIISSEGPVEKTACTFNYTKTLKNKYFEPRDSYFQQYMLRGEYQYWFDLEVTDHHRD
O71954/933-1030              SCNRDGVAIVPQGRIKCKIGDTVIQVIAMDTTLGPMPCRPHDIISSEGPVEKTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
Q8JMI4/156-253               SCNREGVAIVPQGQIKCKIGDTLVQVIALDTKLGPMPCKPYEIISSEGPIEKTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
A0A2C9C261/933-1030          SCNREGVAIVPQGWMKCRIGDTIVQVVALDTKLGPMPCKPYEIIPSEGPVEKTACTFNYTKTLKNKYFEPRDSYFQQYMLKGEYQYWFDLEVTDHHRD
V5RHX7/240-337               DCNRDGVVISTEXEHECLIGNTTVKVLALDDRLGPMPCRPKEIVSSEGPVKKTSCTFNYTKTLRNKYYEPRDSYFQQYMLKGEYQYWFDLDVTDHHTD
Q5ZN69/263-360               DCNRNGVVISTEGSHECLIGNTSVKVHALDERLGPMPCRPKEIVSSEGPVRKTSCTFNYTKTLRNKYYEPRDSYFQQYMLKGEYQYWFDLDVTDHHSD
A0A141ZTI8/240-337           DCNRNGVVISTEGEHECLIGNTTVKVHALDGRLGPMPCRPKEIVSSAGPVRKTSCTFNYTKTLKNKYYEPRDSYFQQYMLKGEYQYWFDLDATDHHTD
Q6QT38/662-759               DCNRDGVVISTEGEHECLIGNTTVKVHALDGRLGPMPCRPKEIVSSAGPVRKTSCTFNYTKTLRNKYYEPRDSYFQQYMLKGEYQYWFDLDVTDHHAD
#=GC scorecons               59996996955583459489595769495956999999794897796998579699999789979897999989999999899999998977897959
#=GC scorecons_70            _******_*___*___*_**_*_***_*_*_*********_*********_**_******************************************_*
#=GC scorecons_80            _***_**_*___*___*_**_*_*_*_*_*__********_*****_***_**_******************************************_*
#=GC scorecons_90            _***_**_*___*___*_**_*___*_*_*__******_*_**__*_***__*_*****_***_***_**********************__**_*_*
//